Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_B23
         (927 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0046 - 15852653-15854560                                         30   3.0  
07_03_1732 + 29109612-29110623,29110712-29110786,29111176-291113...    29   5.2  

>06_03_0046 - 15852653-15854560
          Length = 635

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +1

Query: 175 KQMSRNKFIWNVKKIQFAKMASL-RSPSSPSDGYKRFSDDFANTSINNYGSN 327
           K  SRN  +W  K     KMA   R PSSP +  +    +F + ++ N   N
Sbjct: 277 KLSSRNNLVWRAKSSPAKKMAVYPRIPSSPRNTVQSNPQNFPSLAMANLNPN 328


>07_03_1732 +
           29109612-29110623,29110712-29110786,29111176-29111333,
           29111714-29111937,29112136-29112745
          Length = 692

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 244 RSPSSPSDGYKRFSDDFANTSINNYGSN 327
           R+PS+  DG+    DDFAN   N   SN
Sbjct: 163 RTPSNEEDGFAESKDDFANEEENFSESN 190


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,752,536
Number of Sequences: 37544
Number of extensions: 358614
Number of successful extensions: 681
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)