Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_B23
         (927 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL606534-4|CAI12944.1| 1584|Homo sapiens centrosomal protein 170...    31   7.9  
AL606534-3|CAI12943.1| 1486|Homo sapiens centrosomal protein 170...    31   7.9  
AL606534-1|CAI12942.1| 1557|Homo sapiens centrosomal protein 170...    31   7.9  
AB022658-1|BAA83379.1| 1486|Homo sapiens KARP-1-binding protein ...    31   7.9  
AB022657-1|BAA83378.1| 1584|Homo sapiens KARP-1-binding protein ...    31   7.9  

>AL606534-4|CAI12944.1| 1584|Homo sapiens centrosomal protein 170kDa
            protein.
          Length = 1584

 Score = 30.7 bits (66), Expect = 7.9
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = +1

Query: 232  MASLRSPSSPSDGYKRFSDDFANTSINNYGSNVSSKRKHFLMHRS 366
            M S    +S +  ++RF  D+A+TS + +GSN +S  KH  +  S
Sbjct: 1217 MTSAHGSASVNSRWRRFPTDYASTSEDEFGSNRNSP-KHTRLRTS 1260


>AL606534-3|CAI12943.1| 1486|Homo sapiens centrosomal protein 170kDa
            protein.
          Length = 1486

 Score = 30.7 bits (66), Expect = 7.9
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = +1

Query: 232  MASLRSPSSPSDGYKRFSDDFANTSINNYGSNVSSKRKHFLMHRS 366
            M S    +S +  ++RF  D+A+TS + +GSN +S  KH  +  S
Sbjct: 1119 MTSAHGSASVNSRWRRFPTDYASTSEDEFGSNRNSP-KHTRLRTS 1162


>AL606534-1|CAI12942.1| 1557|Homo sapiens centrosomal protein 170kDa
            protein.
          Length = 1557

 Score = 30.7 bits (66), Expect = 7.9
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = +1

Query: 232  MASLRSPSSPSDGYKRFSDDFANTSINNYGSNVSSKRKHFLMHRS 366
            M S    +S +  ++RF  D+A+TS + +GSN +S  KH  +  S
Sbjct: 1180 MTSAHGSASVNSRWRRFPTDYASTSEDEFGSNRNSP-KHTRLRTS 1223


>AB022658-1|BAA83379.1| 1486|Homo sapiens KARP-1-binding protein 2
            (KAB2) protein.
          Length = 1486

 Score = 30.7 bits (66), Expect = 7.9
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = +1

Query: 232  MASLRSPSSPSDGYKRFSDDFANTSINNYGSNVSSKRKHFLMHRS 366
            M S    +S +  ++RF  D+A+TS + +GSN +S  KH  +  S
Sbjct: 1119 MTSAHGSASVNSRWRRFPTDYASTSEDEFGSNRNSP-KHTRLRTS 1162


>AB022657-1|BAA83378.1| 1584|Homo sapiens KARP-1-binding protein 1
            (KAB1) protein.
          Length = 1584

 Score = 30.7 bits (66), Expect = 7.9
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = +1

Query: 232  MASLRSPSSPSDGYKRFSDDFANTSINNYGSNVSSKRKHFLMHRS 366
            M S    +S +  ++RF  D+A+TS + +GSN +S  KH  +  S
Sbjct: 1217 MTSAHGSASVNSRWRRFPTDYASTSEDEFGSNRNSP-KHTRLRTS 1260


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,280,255
Number of Sequences: 237096
Number of extensions: 2150788
Number of successful extensions: 3637
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3636
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12103451996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)