Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_B23
         (927 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029945-1|ABM92819.1|  657|Drosophila melanogaster IP16959p pro...    30   5.2  
BT023833-1|AAZ86754.1|  657|Drosophila melanogaster LD27920p pro...    30   5.2  
AY069278-1|AAL39423.1|  318|Drosophila melanogaster GM13274p pro...    30   5.2  
AE013599-3932|AAF47253.2|  657|Drosophila melanogaster CG4806-PA...    30   5.2  

>BT029945-1|ABM92819.1|  657|Drosophila melanogaster IP16959p
           protein.
          Length = 657

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 19/75 (25%), Positives = 38/75 (50%)
 Frame = +1

Query: 118 QVKKKRKRNPREEQHLNASKQMSRNKFIWNVKKIQFAKMASLRSPSSPSDGYKRFSDDFA 297
           +++ K+K   + ++HL   K   R +     KKI+ + +A  ++ + P  G K+ +DD  
Sbjct: 566 KMRSKKKIVEQAKEHLKKVKTEKRKQ---KNKKIRESHLAERKANNRPKQGRKKETDDL- 621

Query: 298 NTSINNYGSNVSSKR 342
              IN Y + +S  +
Sbjct: 622 RPLINKYKNMISGNQ 636


>BT023833-1|AAZ86754.1|  657|Drosophila melanogaster LD27920p
           protein.
          Length = 657

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 19/75 (25%), Positives = 38/75 (50%)
 Frame = +1

Query: 118 QVKKKRKRNPREEQHLNASKQMSRNKFIWNVKKIQFAKMASLRSPSSPSDGYKRFSDDFA 297
           +++ K+K   + ++HL   K   R +     KKI+ + +A  ++ + P  G K+ +DD  
Sbjct: 566 KMRSKKKIVEQAKEHLKKVKTEKRKQ---KNKKIRESHLAERKANNRPKQGRKKETDDL- 621

Query: 298 NTSINNYGSNVSSKR 342
              IN Y + +S  +
Sbjct: 622 RPLINKYKNMISGNQ 636


>AY069278-1|AAL39423.1|  318|Drosophila melanogaster GM13274p
           protein.
          Length = 318

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 19/75 (25%), Positives = 38/75 (50%)
 Frame = +1

Query: 118 QVKKKRKRNPREEQHLNASKQMSRNKFIWNVKKIQFAKMASLRSPSSPSDGYKRFSDDFA 297
           +++ K+K   + ++HL   K   R +     KKI+ + +A  ++ + P  G K+ +DD  
Sbjct: 227 KMRSKKKIVEQAKEHLKKVKTEKRKQ---KNKKIRESHLAERKANNRPKQGRKKETDDL- 282

Query: 298 NTSINNYGSNVSSKR 342
              IN Y + +S  +
Sbjct: 283 RPLINKYKNMISGNQ 297


>AE013599-3932|AAF47253.2|  657|Drosophila melanogaster CG4806-PA
           protein.
          Length = 657

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 19/75 (25%), Positives = 38/75 (50%)
 Frame = +1

Query: 118 QVKKKRKRNPREEQHLNASKQMSRNKFIWNVKKIQFAKMASLRSPSSPSDGYKRFSDDFA 297
           +++ K+K   + ++HL   K   R +     KKI+ + +A  ++ + P  G K+ +DD  
Sbjct: 566 KMRSKKKIVEQAKEHLKKVKTEKRKQ---KNKKIRESHLAERKANNRPKQGRKKETDDL- 621

Query: 298 NTSINNYGSNVSSKR 342
              IN Y + +S  +
Sbjct: 622 RPLINKYKNMISGNQ 636


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,295,294
Number of Sequences: 53049
Number of extensions: 651404
Number of successful extensions: 1253
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4566862269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)