Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_B19
(1011 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 36 0.035
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 36 0.061
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.19
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.19
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.24
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.24
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.24
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.43
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 0.99
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 0.99
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 1.3
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 27 1.7
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 30 3.0
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.0
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 4.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 4.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 4.0
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 5.3
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 7.0
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 7.0
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 29 7.0
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 29 7.0
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 28 9.2
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 28 9.2
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 28 9.2
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 28 9.2
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 28 9.2
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 36.3 bits (80), Expect = 0.035
Identities = 41/141 (29%), Positives = 41/141 (29%), Gaps = 3/141 (2%)
Frame = -2
Query: 1010 GCXGARRRXPXXDXAGGA--GYPXXCXXXXGX-GGGGAXRXXGGGXXXXHRGRGXERXCX 840
GC G P GG G C G GGGG GGG G G C
Sbjct: 47 GCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCG 106
Query: 839 XXRRRPSXDX*MGXCRGGVXXGXGXKVXGXXHKPXQXGXLXXLCGGNGGXXXX*GGXAXV 660
P G GG G G G G CGG GG GG
Sbjct: 107 GGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGG-GGGCGGGGGGCGG-GGGGCG 164
Query: 659 GXXGYQXWGEXXGLGXPLXGG 597
G G G G G GG
Sbjct: 165 GGGGGCGGGGGGGCGGGGGGG 185
Score = 33.5 bits (73), Expect = 0.24
Identities = 36/121 (29%), Positives = 37/121 (30%), Gaps = 4/121 (3%)
Frame = -2
Query: 965 GGAGYPXXCXXXXGXGGGGAXRXXGGGXXXXHRGRGXERXCXXXRRRPSXDX*MGX---- 798
GG G C G GGGG GGG G G C P+ G
Sbjct: 73 GGGG--GGCGGGGGCGGGGGGCGGGGGGCGG--GGGCGGGCAPPPPPPACGGGCGGGGGG 128
Query: 797 CRGGVXXGXGXKVXGXXHKPXQXGXLXXLCGGNGGXXXX*GGXAXVGXXGYQXWGEXXGL 618
C GG G G G G CGG GG GG G G G G
Sbjct: 129 CGGGCGGGGGGGCGGGGGGGCGGGGGG--CGGGGGGCGGGGGGCGGGGGGGCGGGGGGGC 186
Query: 617 G 615
G
Sbjct: 187 G 187
Score = 29.1 bits (62), Expect = 5.3
Identities = 22/69 (31%), Positives = 22/69 (31%)
Frame = -2
Query: 803 GXCRGGVXXGXGXKVXGXXHKPXQXGXLXXLCGGNGGXXXX*GGXAXVGXXGYQXWGEXX 624
G C GG G G G P CGG GG GG G G G
Sbjct: 34 GGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGG-GGGGCGGGGGCGGGGGGC 92
Query: 623 GLGXPLXGG 597
G G GG
Sbjct: 93 GGGGGGCGG 101
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 35.5 bits (78), Expect = 0.061
Identities = 37/158 (23%), Positives = 42/158 (26%), Gaps = 2/158 (1%)
Frame = +1
Query: 496 PXERPXPPNXXXXXXSPPPXXGXFFLFSXXTQ-TXPPXKGXPNPXXSPXX*XPXXPTXAX 672
P P PPP + S Q T PP P P P P P
Sbjct: 15 PESAPAATTPQPPPPPPPPKPAPYVEQSAQPQQTAPP----PPPAPYPQQAVPA-PAPPP 69
Query: 673 PPYXXXXPPFPPQXXXSXPX-CXGLWXXPXTLXPXPXXTPPLQXPIXXSSXGLLLXXXQX 849
PY P P S P + P P P P +
Sbjct: 70 APYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQ 129
Query: 850 RSXPLPRCXXXXPPPXXRXAPPPPXPNXXXHXXG*PAP 963
+ P P PPP PPPP P+ P P
Sbjct: 130 QQPPPPPPPPHYPPPPPHYPPPPPAPHSAYIDHSAPRP 167
Score = 31.9 bits (69), Expect = 0.75
Identities = 31/122 (25%), Positives = 37/122 (30%), Gaps = 3/122 (2%)
Frame = +3
Query: 654 TPDXRPPPLXXXPPPV--SSTKXXQXPPLSRFMXXXXYLXPXXXXXXAPTXPHSXVXRXP 827
TP PPP P P S + Q P P AP H+ P
Sbjct: 23 TPQPPPPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAP 82
Query: 828 P-PPXXAXSLPTPAPMXXXXXPSXXPXGAAXXXXXPXXAXXWVARPPRXVXXRXPPARPP 1004
P ++P PAP P+ P A P A P + PP PP
Sbjct: 83 PLASYPQNAVPVPAP-----PPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPP 137
Query: 1005 TP 1010
P
Sbjct: 138 PP 139
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.19
Identities = 36/145 (24%), Positives = 41/145 (28%)
Frame = +1
Query: 496 PXERPXPPNXXXXXXSPPPXXGXFFLFSXXTQTXPPXKGXPNPXXSPXX*XPXXPTXAXP 675
P P PP+ PP G T PP P+ P P P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGM-------TPRPPPP---PSSGMWPPPPPPPPGRTPGP 310
Query: 676 PYXXXXPPFPPQXXXSXPXCXGLWXXPXTLXPXPXXTPPLQXPIXXSSXGLLLXXXQXRS 855
P PP PP P G+ P P PP P S+
Sbjct: 311 PGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSA-------GPGMY 363
Query: 856 XPLPRCXXXXPPPXXRXAPPPPXPN 930
P P PP PPPP P+
Sbjct: 364 PPPPPSRPPAPPSGHGMIPPPPPPS 388
Score = 29.9 bits (64), Expect = 3.0
Identities = 25/97 (25%), Positives = 29/97 (29%), Gaps = 1/97 (1%)
Frame = +1
Query: 679 YXXXXPPFPPQXXXSXPXCXGLWXXPX-TLXPXPXXTPPLQXPIXXSSXGLLLXXXQXRS 855
Y PP PP P + P T P P + + P G
Sbjct: 256 YQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPG 315
Query: 856 XPLPRCXXXXPPPXXRXAPPPPXPNXXXHXXG*PAPP 966
P P PP PPPP P + G P PP
Sbjct: 316 MPPPPPPSRFGPPGMGGMPPPPPPG-MRYPGGMPPPP 351
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.9 bits (74), Expect = 0.19
Identities = 36/145 (24%), Positives = 41/145 (28%)
Frame = +1
Query: 496 PXERPXPPNXXXXXXSPPPXXGXFFLFSXXTQTXPPXKGXPNPXXSPXX*XPXXPTXAXP 675
P P PP+ PP G T PP P+ P P P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGM-------TPRPPPP---PSSGMWPPPPPPPPGRTPGP 320
Query: 676 PYXXXXPPFPPQXXXSXPXCXGLWXXPXTLXPXPXXTPPLQXPIXXSSXGLLLXXXQXRS 855
P PP PP P G+ P P PP P S+
Sbjct: 321 PGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSA-------GPGMY 373
Query: 856 XPLPRCXXXXPPPXXRXAPPPPXPN 930
P P PP PPPP P+
Sbjct: 374 PPPPPSRPPAPPSGHGMIPPPPPPS 398
Score = 29.9 bits (64), Expect = 3.0
Identities = 25/97 (25%), Positives = 29/97 (29%), Gaps = 1/97 (1%)
Frame = +1
Query: 679 YXXXXPPFPPQXXXSXPXCXGLWXXPX-TLXPXPXXTPPLQXPIXXSSXGLLLXXXQXRS 855
Y PP PP P + P T P P + + P G
Sbjct: 266 YQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPG 325
Query: 856 XPLPRCXXXXPPPXXRXAPPPPXPNXXXHXXG*PAPP 966
P P PP PPPP P + G P PP
Sbjct: 326 MPPPPPPSRFGPPGMGGMPPPPPPG-MRYPGGMPPPP 361
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.24
Identities = 30/108 (27%), Positives = 33/108 (30%)
Frame = +1
Query: 598 PPXKGXPNPXXSPXX*XPXXPTXAXPPYXXXXPPFPPQXXXSXPXCXGLWXXPXTLXPXP 777
PP KG P P P + PP PP PP P G P P P
Sbjct: 241 PPPKGSP-PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 778 XXTPPLQXPIXXSSXGLLLXXXQXRSXPLPRCXXXXPPPXXRXAPPPP 921
P P S P P+ PPP +PPPP
Sbjct: 300 PPPPRGSPPTG--------------SLPPPQA-GGSPPPAGTGSPPPP 332
Score = 31.5 bits (68), Expect = 0.99
Identities = 22/78 (28%), Positives = 26/78 (33%)
Frame = +1
Query: 544 PPPXXGXFFLFSXXTQTXPPXKGXPNPXXSPXX*XPXXPTXAXPPYXXXXPPFPPQXXXS 723
PPP G L + PP G P P + P PT + PP P PP+
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS--PPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 724 XPXCXGLWXXPXTLXPXP 777
P P P P
Sbjct: 298 PPPPPPRGSPPTGSLPPP 315
Score = 30.3 bits (65), Expect = 2.3
Identities = 35/129 (27%), Positives = 37/129 (28%), Gaps = 6/129 (4%)
Frame = +1
Query: 436 PXPPXXELXAXXRGIXSXRXPXERPXPPNXXXXXXSPPPXXGXFFLFSXXTQTXPPXKGX 615
P PP + G S P PP PPP G PP G
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPP-PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 296
Query: 616 PNPXXSPXX*XPXX---PTXAX---PPYXXXXPPFPPQXXXSXPXCXGLWXXPXTLXPXP 777
P P P P P A PP PP PP+ P P T P P
Sbjct: 297 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP-P 355
Query: 778 XXTPPLQXP 804
PP P
Sbjct: 356 TGRPPRGGP 364
Score = 29.9 bits (64), Expect = 3.0
Identities = 21/71 (29%), Positives = 23/71 (32%)
Frame = +1
Query: 754 PXTLXPXPXXTPPLQXPIXXSSXGLLLXXXQXRSXPLPRCXXXXPPPXXRXAPPPPXPNX 933
P P P P P+ S G S P PR PPP PPP +
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGS--GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 289
Query: 934 XXHXXG*PAPP 966
G P PP
Sbjct: 290 PPPRAGSPPPP 300
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 853 SXPLPRCXXXXPPPXXRXAPPPPXPNXXXHXXG*PAPPA 969
S P P PPP PPPP P P P A
Sbjct: 279 SPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 317
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.24
Identities = 30/108 (27%), Positives = 33/108 (30%)
Frame = +1
Query: 598 PPXKGXPNPXXSPXX*XPXXPTXAXPPYXXXXPPFPPQXXXSXPXCXGLWXXPXTLXPXP 777
PP KG P P P + PP PP PP P G P P P
Sbjct: 262 PPPKGSP-PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 778 XXTPPLQXPIXXSSXGLLLXXXQXRSXPLPRCXXXXPPPXXRXAPPPP 921
P P S P P+ PPP +PPPP
Sbjct: 321 PPPPRGSPPTG--------------SLPPPQA-GGSPPPAGTGSPPPP 353
Score = 31.5 bits (68), Expect = 0.99
Identities = 22/78 (28%), Positives = 26/78 (33%)
Frame = +1
Query: 544 PPPXXGXFFLFSXXTQTXPPXKGXPNPXXSPXX*XPXXPTXAXPPYXXXXPPFPPQXXXS 723
PPP G L + PP G P P + P PT + PP P PP+
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS--PPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 724 XPXCXGLWXXPXTLXPXP 777
P P P P
Sbjct: 319 PPPPPPRGSPPTGSLPPP 336
Score = 30.3 bits (65), Expect = 2.3
Identities = 35/129 (27%), Positives = 37/129 (28%), Gaps = 6/129 (4%)
Frame = +1
Query: 436 PXPPXXELXAXXRGIXSXRXPXERPXPPNXXXXXXSPPPXXGXFFLFSXXTQTXPPXKGX 615
P PP + G S P PP PPP G PP G
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPP-PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 317
Query: 616 PNPXXSPXX*XPXX---PTXAX---PPYXXXXPPFPPQXXXSXPXCXGLWXXPXTLXPXP 777
P P P P P A PP PP PP+ P P T P P
Sbjct: 318 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP-P 376
Query: 778 XXTPPLQXP 804
PP P
Sbjct: 377 TGRPPRGGP 385
Score = 29.9 bits (64), Expect = 3.0
Identities = 21/71 (29%), Positives = 23/71 (32%)
Frame = +1
Query: 754 PXTLXPXPXXTPPLQXPIXXSSXGLLLXXXQXRSXPLPRCXXXXPPPXXRXAPPPPXPNX 933
P P P P P+ S G S P PR PPP PPP +
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGS--GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 310
Query: 934 XXHXXG*PAPP 966
G P PP
Sbjct: 311 PPPRAGSPPPP 321
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 853 SXPLPRCXXXXPPPXXRXAPPPPXPNXXXHXXG*PAPPA 969
S P P PPP PPPP P P P A
Sbjct: 300 SPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 338
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.24
Identities = 30/108 (27%), Positives = 33/108 (30%)
Frame = +1
Query: 598 PPXKGXPNPXXSPXX*XPXXPTXAXPPYXXXXPPFPPQXXXSXPXCXGLWXXPXTLXPXP 777
PP KG P P P + PP PP PP P G P P P
Sbjct: 247 PPPKGSP-PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 778 XXTPPLQXPIXXSSXGLLLXXXQXRSXPLPRCXXXXPPPXXRXAPPPP 921
P P S P P+ PPP +PPPP
Sbjct: 306 PPPPRGSPPTG--------------SLPPPQA-GGSPPPAGTGSPPPP 338
Score = 31.5 bits (68), Expect = 0.99
Identities = 22/78 (28%), Positives = 26/78 (33%)
Frame = +1
Query: 544 PPPXXGXFFLFSXXTQTXPPXKGXPNPXXSPXX*XPXXPTXAXPPYXXXXPPFPPQXXXS 723
PPP G L + PP G P P + P PT + PP P PP+
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS--PPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 724 XPXCXGLWXXPXTLXPXP 777
P P P P
Sbjct: 304 PPPPPPRGSPPTGSLPPP 321
Score = 30.3 bits (65), Expect = 2.3
Identities = 35/129 (27%), Positives = 37/129 (28%), Gaps = 6/129 (4%)
Frame = +1
Query: 436 PXPPXXELXAXXRGIXSXRXPXERPXPPNXXXXXXSPPPXXGXFFLFSXXTQTXPPXKGX 615
P PP + G S P PP PPP G PP G
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPP-PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 302
Query: 616 PNPXXSPXX*XPXX---PTXAX---PPYXXXXPPFPPQXXXSXPXCXGLWXXPXTLXPXP 777
P P P P P A PP PP PP+ P P T P P
Sbjct: 303 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP-P 361
Query: 778 XXTPPLQXP 804
PP P
Sbjct: 362 TGRPPRGGP 370
Score = 29.9 bits (64), Expect = 3.0
Identities = 21/71 (29%), Positives = 23/71 (32%)
Frame = +1
Query: 754 PXTLXPXPXXTPPLQXPIXXSSXGLLLXXXQXRSXPLPRCXXXXPPPXXRXAPPPPXPNX 933
P P P P P+ S G S P PR PPP PPP +
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGS--GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 295
Query: 934 XXHXXG*PAPP 966
G P PP
Sbjct: 296 PPPRAGSPPPP 306
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 853 SXPLPRCXXXXPPPXXRXAPPPPXPNXXXHXXG*PAPPA 969
S P P PPP PPPP P P P A
Sbjct: 285 SPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 323
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 32.7 bits (71), Expect = 0.43
Identities = 17/61 (27%), Positives = 19/61 (31%)
Frame = +3
Query: 828 PPPXXAXSLPTPAPMXXXXXPSXXPXGAAXXXXXPXXAXXWVARPPRXVXXRXPPARPPT 1007
PPP +P P PM P P P PP + P RP T
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRPKT 134
Query: 1008 P 1010
P
Sbjct: 135 P 135
Score = 32.3 bits (70), Expect = 0.56
Identities = 15/58 (25%), Positives = 18/58 (31%)
Frame = +3
Query: 759 YLXPXXXXXXAPTXPHSXVXRXPPPPXXAXSLPTPAPMXXXXXPSXXPXGAAXXXXXP 932
++ P P P PPPP +P P PM P P G P
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPP 130
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.5 bits (68), Expect = 0.99
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +1
Query: 769 PXPXXTPPLQXPIXXSSXGLLLXXXQXRSXPLPRCXXXXPPPXXRXAPPPPXP 927
P P PP+ P + Q P P C PPP PPPP P
Sbjct: 29 PCPPPPPPMCAPPPLPCPPPPICPPQFCPPP-PMCPPPPPPPPPPMCPPPPPP 80
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/61 (26%), Positives = 22/61 (36%)
Frame = +3
Query: 669 PPPLXXXPPPVSSTKXXQXPPLSRFMXXXXYLXPXXXXXXAPTXPHSXVXRXPPPPXXAX 848
PPP PPP+ + PP + + P P P + PPPP +
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPP--ICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSY 84
Query: 849 S 851
S
Sbjct: 85 S 85
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.5 bits (68), Expect = 0.99
Identities = 19/72 (26%), Positives = 22/72 (30%)
Frame = +3
Query: 654 TPDXRPPPLXXXPPPVSSTKXXQXPPLSRFMXXXXYLXPXXXXXXAPTXPHSXVXRXPPP 833
+P PPP PP T PP M P P S + PPP
Sbjct: 1335 SPSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPP 1394
Query: 834 PXXAXSLPTPAP 869
P + P P
Sbjct: 1395 PLPSEEKKNPLP 1406
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.1 bits (67), Expect = 1.3
Identities = 40/160 (25%), Positives = 43/160 (26%), Gaps = 3/160 (1%)
Frame = +1
Query: 514 PPNXXXXXXSPPPXXGXFFLFSXXTQTXPPXKGXPNPXXSPXX*XPXXPTXAXPPYXXXX 693
PPN PPP F F P G P P P P A PP
Sbjct: 661 PPNIQPPVPHPPPMG---FPFQHQLTQLP---GQPRPAGLPPGVPPMFNLNAPPPPGIPG 714
Query: 694 -PPFPPQXXXSXPXCXGLWXXPXTLXPXPXXTPPLQXPIXXSSXGLLLXXXQXRSXPLPR 870
PP PP P G+ P P P Q + P
Sbjct: 715 YPPAPPPPGVGPPPPQGI--PPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFP- 771
Query: 871 CXXXXPPPXX--RXAPPPPXPNXXXHXXG*PAPPAWSXXG 984
PPP PPPP G P PP + G
Sbjct: 772 -----PPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRG 806
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 27.1 bits (57), Expect(2) = 1.7
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 995 RRRXPXXDXAGGAGYPXXCXXXXGXGGGGA 906
R++ P GG GYP G GGGGA
Sbjct: 257 RQQVPTNPMGGGGGYPQP-PPQQGGGGGGA 285
Score = 22.2 bits (45), Expect(2) = 1.7
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -2
Query: 926 GXGGGGAXRXXGGGXXXXHRGRG 858
G GGGG GG ++G G
Sbjct: 313 GGGGGGGGGMGGGNRGYGYQGGG 335
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical protein
ZC518.2 protein.
Length = 984
Score = 30.7 bits (66), Expect = 1.7
Identities = 23/74 (31%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Frame = +3
Query: 795 TXPHSXVXRXPPPPXXAX--SLPTPAPMXXXXXPSXXPXGAAXXXXXPXXAXXWVARPPR 968
T P PPPP + + PTP P PS P P + ARP
Sbjct: 113 TQPSMNGHHAPPPPAVSRPPAFPTPPPSVGSAAPSIQP---------PIPSALASARPAP 163
Query: 969 XVXXRXPPARPPTP 1010
+ PPA PTP
Sbjct: 164 FPAAQPPPAPTPTP 177
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 29.9 bits (64), Expect = 3.0
Identities = 21/69 (30%), Positives = 22/69 (31%)
Frame = -1
Query: 516 GVGAFXXXPXRXNSSPXXXELPPGGXGKXXXAGXXXXSXXGXPXPXXDXRAXPXXQNPPG 337
G GA P + P PPGG G G G P P Q PPG
Sbjct: 188 GPGAPGNTPSGGAAGPPGPPGPPGGPGNDGQPGGP-----GNPGAPGAVTEVPGQQGPPG 242
Query: 336 XXVXXXPPG 310
PPG
Sbjct: 243 PPGPAGPPG 251
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical protein
B0035.1b protein.
Length = 341
Score = 29.9 bits (64), Expect = 3.0
Identities = 22/106 (20%), Positives = 29/106 (27%)
Frame = +3
Query: 693 PPVSSTKXXQXPPLSRFMXXXXYLXPXXXXXXAPTXPHSXVXRXPPPPXXAXSLPTPAPM 872
P ++ PP+ M + P P+ P PP + +P
Sbjct: 98 PDEKRSRMDNGPPMPTPMPFPQHF-PFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMP 156
Query: 873 XXXXXPSXXPXGAAXXXXXPXXAXXWVARPPRXVXXRXPPARPPTP 1010
P P A P PPR PP PP P
Sbjct: 157 GAYPPPRGYPPAPAPGVYMPPPGMPGAYPPPRMPIGHGPPGGPPMP 202
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical protein
B0035.1a protein.
Length = 298
Score = 29.9 bits (64), Expect = 3.0
Identities = 22/106 (20%), Positives = 29/106 (27%)
Frame = +3
Query: 693 PPVSSTKXXQXPPLSRFMXXXXYLXPXXXXXXAPTXPHSXVXRXPPPPXXAXSLPTPAPM 872
P ++ PP+ M + P P+ P PP + +P
Sbjct: 98 PDEKRSRMDNGPPMPTPMPFPQHF-PFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMP 156
Query: 873 XXXXXPSXXPXGAAXXXXXPXXAXXWVARPPRXVXXRXPPARPPTP 1010
P P A P PPR PP PP P
Sbjct: 157 GAYPPPRGYPPAPAPGVYMPPPGMPGAYPPPRMPIGHGPPGGPPMP 202
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 29.9 bits (64), Expect = 3.0
Identities = 32/114 (28%), Positives = 38/114 (33%), Gaps = 9/114 (7%)
Frame = -2
Query: 803 GXCRGGVXXGXGXKVXGXXHKPXQXGXLXXLCGGNGGXXXX*GGXAXVGXXGY------- 645
G RGG G G G + + G GG GG GG G GY
Sbjct: 84 GQSRGGGRGGFGGSRGGGGYDGGRGGSRGGYDGGRGGYGGDRGGRGG-GRGGYDGERRGG 142
Query: 644 QXW--GEXXGLGXPLXGGXVWVXXEKRKKXPXXGGGEXXXXXXFGGXGRSXGXR 489
W G G P G + R+ P GGG +GG G + G R
Sbjct: 143 SRWDDGNSDRQGGPPGGRGGYQDRGPRRDGPPSGGG-------YGGGGAASGNR 189
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical protein
C36H8.1 protein.
Length = 418
Score = 29.5 bits (63), Expect = 4.0
Identities = 21/75 (28%), Positives = 25/75 (33%), Gaps = 1/75 (1%)
Frame = +3
Query: 789 APTXPHSXVXRXPPPPXXAXSLPTPAPMXXXXXPSXXPXGAAXXXXXPXXAXXWVARP-P 965
AP P P P A P PAPM + P A P A P P
Sbjct: 176 APPPPRPPPQEPPKPVEQAAPPPPPAPMPVPVEKAPEPVPAPVEQIAPPPAPVQDPAPAP 235
Query: 966 RXVXXRXPPARPPTP 1010
PP++ P+P
Sbjct: 236 VEPSDPAPPSKLPSP 250
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 4.0
Identities = 37/127 (29%), Positives = 37/127 (29%), Gaps = 4/127 (3%)
Frame = -2
Query: 965 GGAGYPXXCXXXXGXGGGGAX--RXXGGGXXXXHRGRGXERXCXXXRRR--PSXDX*MGX 798
GG G C G GGG A GGG G G C G
Sbjct: 30 GGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGG 89
Query: 797 CRGGVXXGXGXKVXGXXHKPXQXGXLXXLCGGNGGXXXX*GGXAXVGXXGYQXWGEXXGL 618
C GG G G G G CGG GG GG G G G G
Sbjct: 90 CGGG-GGGCGGG-GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGC 147
Query: 617 GXPLXGG 597
G GG
Sbjct: 148 GGGSSGG 154
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 4.0
Identities = 37/127 (29%), Positives = 37/127 (29%), Gaps = 4/127 (3%)
Frame = -2
Query: 965 GGAGYPXXCXXXXGXGGGGAX--RXXGGGXXXXHRGRGXERXCXXXRRR--PSXDX*MGX 798
GG G C G GGG A GGG G G C G
Sbjct: 30 GGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGG 89
Query: 797 CRGGVXXGXGXKVXGXXHKPXQXGXLXXLCGGNGGXXXX*GGXAXVGXXGYQXWGEXXGL 618
C GG G G G G CGG GG GG G G G G
Sbjct: 90 CGGG-GGGCGGG-GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGC 147
Query: 617 GXPLXGG 597
G GG
Sbjct: 148 GGGSSGG 154
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 886 PPPXXRXAPPPPXPNXXXHXXG*PAPP 966
PPP PPPP P G P PP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 886 PPPXXRXAPPPPXPNXXXHXXG*PAPP 966
PPP PPPP P G P PP
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 886 PPPXXRXAPPPPXPNXXXHXXG*PAPP 966
PPP PPPP P G P PP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 886 PPPXXRXAPPPPXPNXXXHXXG*PAPP 966
PPP PPPP P G P PP
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 886 PPPXXRXAPPPPXPNXXXHXXG*PAPP 966
PPP PPPP P G P PP
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 886 PPPXXRXAPPPPXPNXXXHXXG*PAPP 966
PPP PPPP P G P PP
Sbjct: 345 PPPPGGCPPPPPPPPPGGFKGGPPPPP 371
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.1 bits (62), Expect = 5.3
Identities = 27/95 (28%), Positives = 27/95 (28%), Gaps = 3/95 (3%)
Frame = -2
Query: 707 GGNGGXXXX*GGXAXVGXXGYQXWGEXXGLGXPL---XGGXVWVXXEKRKKXPXXGGGEX 537
GG G GG G G WG G G GG W GG
Sbjct: 26 GGGPGRWGGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGR 85
Query: 536 XXXXXFGGXGRSXGXRXDXIPLXXASSSXXGGLGN 432
GG GR G R D GG GN
Sbjct: 86 GDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGN 120
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 7.0
Identities = 23/91 (25%), Positives = 26/91 (28%), Gaps = 7/91 (7%)
Frame = +3
Query: 759 YLXPXXXXXXAPTXPHSXVXRXPPPPXXAXSL----PTPAPMXXXXXPSXXPXGAAXXXX 926
Y P P H PPPP +P P P P +
Sbjct: 100 YPVPGQEGHQVPAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRR 159
Query: 927 XPXXAXXWVARPPRXV---XXRXPPARPPTP 1010
P RPPR R PP PP+P
Sbjct: 160 PPMTPPSPQRRPPRTPPSPEPRNPPRTPPSP 190
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 859 PLPRCXXXXPPPXXRXAPPPPXP 927
P P C PPP PPPP P
Sbjct: 67 PPPICPPPPPPPMPCPPPPPPMP 89
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 28.7 bits (61), Expect = 7.0
Identities = 24/71 (33%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Frame = -2
Query: 794 RGGVXXGXGXKVXGXXHKPXQXGXLXXLCGGNGGXXXX*GGXAXVGXXGYQXWGEXXGLG 615
RGG G G G P Q G G GG GG G G Q G G G
Sbjct: 178 RGGYNGGGGG--GGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWG 235
Query: 614 XP--LXGGXVW 588
P GG W
Sbjct: 236 GPQQQQGGGGW 246
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 28.7 bits (61), Expect = 7.0
Identities = 24/71 (33%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Frame = -2
Query: 794 RGGVXXGXGXKVXGXXHKPXQXGXLXXLCGGNGGXXXX*GGXAXVGXXGYQXWGEXXGLG 615
RGG G G G P Q G G GG GG G G Q G G G
Sbjct: 216 RGGYNGGGGG--GGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWG 273
Query: 614 XP--LXGGXVW 588
P GG W
Sbjct: 274 GPQQQQGGGGW 284
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 965 GGAGYPXXCXXXXGXGGGGAXRXXGGGXXXXHRGRGXER 849
GG G G GGGG R GGG G G R
Sbjct: 90 GGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGR 128
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 598 PPXKGXPNPXXSPXX*XPXXPTXAXPPYXXXXPPFPPQ 711
PP G P P P P PP+ PP PP+
Sbjct: 50 PPPFGPPPPWDRPPPPWRRPPWHRRPPWGLPPPPPPPE 87
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 28.3 bits (60), Expect = 9.2
Identities = 20/71 (28%), Positives = 24/71 (33%)
Frame = +3
Query: 657 PDXRPPPLXXXPPPVSSTKXXQXPPLSRFMXXXXYLXPXXXXXXAPTXPHSXVXRXPPPP 836
P PPP+ PPP+ PP + Y P P P S PPP
Sbjct: 90 PPFMPPPIGMPPPPLG------MPPPHIGLGAAPYAVPPPMSLLGP-PPFSVPPSVPPPT 142
Query: 837 XXAXSLPTPAP 869
A + P P
Sbjct: 143 SSAAAPIVPPP 153
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 28.3 bits (60), Expect = 9.2
Identities = 20/71 (28%), Positives = 24/71 (33%)
Frame = +3
Query: 657 PDXRPPPLXXXPPPVSSTKXXQXPPLSRFMXXXXYLXPXXXXXXAPTXPHSXVXRXPPPP 836
P PPP+ PPP+ PP + Y P P P S PPP
Sbjct: 113 PPFMPPPIGMPPPPLG------MPPPHIGLGAAPYAVPPPMSLLGP-PPFSVPPSVPPPT 165
Query: 837 XXAXSLPTPAP 869
A + P P
Sbjct: 166 SSAAAPIVPPP 176
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 28.3 bits (60), Expect = 9.2
Identities = 20/71 (28%), Positives = 24/71 (33%)
Frame = +3
Query: 657 PDXRPPPLXXXPPPVSSTKXXQXPPLSRFMXXXXYLXPXXXXXXAPTXPHSXVXRXPPPP 836
P PPP+ PPP+ PP + Y P P P S PPP
Sbjct: 363 PPFMPPPIGMPPPPLG------MPPPHIGLGAAPYAVPPPMSLLGP-PPFSVPPSVPPPT 415
Query: 837 XXAXSLPTPAP 869
A + P P
Sbjct: 416 SSAAAPIVPPP 426
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,889,253
Number of Sequences: 27780
Number of extensions: 265369
Number of successful extensions: 1756
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1318
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2657408452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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