Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_B13
(911 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 36 0.030
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.070
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.070
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.070
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 34 0.12
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.49
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.49
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.49
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 32 0.65
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 0.86
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.1
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 1.1
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 27 1.3
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 31 1.5
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 27 1.9
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 30 2.6
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 30 2.6
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 30 2.6
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 29 3.5
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 29 3.5
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 29 3.5
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 25 3.9
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 25 4.0
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 4.6
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 4.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 4.6
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 26 5.2
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 29 6.1
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 6.1
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 28 8.1
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 28 8.1
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 28 8.1
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 28 8.1
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 28 8.1
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 28 8.1
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 28 8.1
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 23 9.6
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 36.3 bits (80), Expect = 0.030
Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Frame = +3
Query: 726 PPXPKPPP--PXXPPXXXPTLXXPXGXKXXXKXPXTGXTXKRXXFRXFXPXPPPXRVXXP 899
PP P PPP PP L G P + P PPP + P
Sbjct: 530 PPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGP 589
Query: 900 PPPP 911
PPPP
Sbjct: 590 PPPP 593
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.1 bits (77), Expect = 0.070
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 4/65 (6%)
Frame = +3
Query: 729 PXPKPPPPXXPPXXXPTLXXPXGXKXXXKXPXTGXTXKRXXFRXFXPX----PPPXRVXX 896
P P PPP PP P P TG P PPP R
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 296
Query: 897 PPPPP 911
PPPPP
Sbjct: 297 PPPPP 301
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 3/65 (4%)
Frame = +3
Query: 726 PPXPK---PPPPXXPPXXXPTLXXPXGXKXXXKXPXTGXTXKRXXFRXFXPXPPPXRVXX 896
PP P PPPP P P P TG PPP
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA----GGSPPPAGTGS 328
Query: 897 PPPPP 911
PPPPP
Sbjct: 329 PPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.1 bits (77), Expect = 0.070
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 4/65 (6%)
Frame = +3
Query: 729 PXPKPPPPXXPPXXXPTLXXPXGXKXXXKXPXTGXTXKRXXFRXFXPX----PPPXRVXX 896
P P PPP PP P P TG P PPP R
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 317
Query: 897 PPPPP 911
PPPPP
Sbjct: 318 PPPPP 322
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 3/65 (4%)
Frame = +3
Query: 726 PPXPK---PPPPXXPPXXXPTLXXPXGXKXXXKXPXTGXTXKRXXFRXFXPXPPPXRVXX 896
PP P PPPP P P P TG PPP
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA----GGSPPPAGTGS 349
Query: 897 PPPPP 911
PPPPP
Sbjct: 350 PPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.070
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 4/65 (6%)
Frame = +3
Query: 729 PXPKPPPPXXPPXXXPTLXXPXGXKXXXKXPXTGXTXKRXXFRXFXPX----PPPXRVXX 896
P P PPP PP P P TG P PPP R
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 302
Query: 897 PPPPP 911
PPPPP
Sbjct: 303 PPPPP 307
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 3/65 (4%)
Frame = +3
Query: 726 PPXPK---PPPPXXPPXXXPTLXXPXGXKXXXKXPXTGXTXKRXXFRXFXPXPPPXRVXX 896
PP P PPPP P P P TG PPP
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA----GGSPPPAGTGS 334
Query: 897 PPPPP 911
PPPPP
Sbjct: 335 PPPPP 339
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/62 (32%), Positives = 21/62 (33%)
Frame = +3
Query: 726 PPXPKPPPPXXPPXXXPTLXXPXGXKXXXKXPXTGXTXKRXXFRXFXPXPPPXRVXXPPP 905
PP P PPPP P P P P P PPP + PPP
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPP---------PPPPPPPPMCPPPP 78
Query: 906 PP 911
PP
Sbjct: 79 PP 80
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +3
Query: 621 PKXPPPPXGXXFPFFXXXXXXXXGHXLFFXXXXXXPPXPKPPPPXXPPXXXPTL 782
P PPPP P F PP P PPPP P P +
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPM 81
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 33.1 bits (72), Expect = 0.28
Identities = 20/64 (31%), Positives = 23/64 (35%), Gaps = 4/64 (6%)
Frame = +3
Query: 726 PPXPKP----PPPXXPPXXXPTLXXPXGXKXXXKXPXTGXTXKRXXFRXFXPXPPPXRVX 893
PP +P PPP PP P P + P + R F P PPP RV
Sbjct: 392 PPRTEPPKTEPPPTEPPKTEPPKTTPPKTEPPTTEPPNIPYCWQQQSRLFAPSPPPPRVN 451
Query: 894 XPPP 905
P
Sbjct: 452 NTMP 455
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.49
Identities = 23/71 (32%), Positives = 23/71 (32%), Gaps = 9/71 (12%)
Frame = +3
Query: 726 PPXPKPPPPXXPPXXXPTLXXPX----GXKXXXKXPXTGXTXKRXXFRXFXPXPPPXRVX 893
PP P PP PP T P G P G T P PPP R
Sbjct: 267 PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG 326
Query: 894 XP-----PPPP 911
P PPPP
Sbjct: 327 PPGMGGMPPPP 337
Score = 30.3 bits (65), Expect = 2.0
Identities = 28/105 (26%), Positives = 32/105 (30%), Gaps = 8/105 (7%)
Frame = +3
Query: 621 PKXPPPPXGXXFPFFXXXXXXXXGHXLFFXXXXXXPPXPKPP---PPXX---PPXXXPTL 782
P+ PPPP +P G PP P P PP PP P +
Sbjct: 285 PRPPPPPSSGMWP---PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGM 341
Query: 783 XXPXGXKXXX--KXPXTGXTXKRXXFRXFXPXPPPXRVXXPPPPP 911
P G + P G P PP PPPPP
Sbjct: 342 RYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 386
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.49
Identities = 22/64 (34%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Frame = -2
Query: 910 GGGGGXXTLXGGGXGXXXRKXXLFXVXPV--XGXXXXXFXPXGXXRVGXXXGGXXGGGGF 737
GGGGG GGG G + V P G G V GG GGGG
Sbjct: 158 GGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGS 217
Query: 736 GXGG 725
GG
Sbjct: 218 SGGG 221
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.49
Identities = 22/64 (34%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Frame = -2
Query: 910 GGGGGXXTLXGGGXGXXXRKXXLFXVXPV--XGXXXXXFXPXGXXRVGXXXGGXXGGGGF 737
GGGGG GGG G + V P G G V GG GGGG
Sbjct: 158 GGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGS 217
Query: 736 GXGG 725
GG
Sbjct: 218 SGGG 221
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 32.3 bits (70), Expect = 0.49
Identities = 18/62 (29%), Positives = 24/62 (38%)
Frame = +3
Query: 726 PPXPKPPPPXXPPXXXPTLXXPXGXKXXXKXPXTGXTXKRXXFRXFXPXPPPXRVXXPPP 905
P P+ PPP PP P + P + + P + P PP + PPP
Sbjct: 144 PRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRN-------PPRTPPSPI--PPP 194
Query: 906 PP 911
PP
Sbjct: 195 PP 196
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 820 PKXXXPQKGXXSGXFXPPPPPXGFXXLPPP 909
P P+K G PPPPP PPP
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPPPRVPRTPPP 152
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.49
Identities = 23/71 (32%), Positives = 23/71 (32%), Gaps = 9/71 (12%)
Frame = +3
Query: 726 PPXPKPPPPXXPPXXXPTLXXPX----GXKXXXKXPXTGXTXKRXXFRXFXPXPPPXRVX 893
PP P PP PP T P G P G T P PPP R
Sbjct: 277 PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG 336
Query: 894 XP-----PPPP 911
P PPPP
Sbjct: 337 PPGMGGMPPPP 347
Score = 30.3 bits (65), Expect = 2.0
Identities = 28/105 (26%), Positives = 32/105 (30%), Gaps = 8/105 (7%)
Frame = +3
Query: 621 PKXPPPPXGXXFPFFXXXXXXXXGHXLFFXXXXXXPPXPKPP---PPXX---PPXXXPTL 782
P+ PPPP +P G PP P P PP PP P +
Sbjct: 295 PRPPPPPSSGMWP---PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGM 351
Query: 783 XXPXGXKXXX--KXPXTGXTXKRXXFRXFXPXPPPXRVXXPPPPP 911
P G + P G P PP PPPPP
Sbjct: 352 RYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 396
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 31.9 bits (69), Expect = 0.65
Identities = 19/57 (33%), Positives = 21/57 (36%)
Frame = -2
Query: 910 GGGGGXXTLXGGGXGXXXRKXXLFXVXPVXGXXXXXFXPXGXXRVGXXXGGXXGGGG 740
GGGGG GGG G R+ G + P RV G GGGG
Sbjct: 247 GGGGGGYMRSGGGGGGPDRRDHRDNDRNGGGGGHRPYDPSFRRRVESYGSGNSGGGG 303
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.5 bits (68), Expect = 0.86
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = +3
Query: 729 PXPKPPPPXXPPXXXPTLXXPXGXKXXXKXPXTGXTXKRXXFRXFXPXPPPXRVXXPPPP 908
P P PPP P P P P ++ P PPP PPPP
Sbjct: 93 PVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQ-------PPPPPPPPHYPPPP 145
Query: 909 P 911
P
Sbjct: 146 P 146
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/64 (32%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Frame = +3
Query: 726 PPXPKPPPPXXPPXXXP--TLXXPXGXKXXXKXPXTGXTXKRXXFRXFXPXPPPXRVXXP 899
PP PPP PP P T P P +G P PPP P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP--------PPPPPPGGCPPP 771
Query: 900 PPPP 911
PPPP
Sbjct: 772 PPPP 775
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +1
Query: 778 PSXXPXGXKXXXXXPKXXXPQKGXXSGXFXPPPPPXGFXXLPPP 909
P P G P P G PPPPP GF PPP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPP-PPPPPPGGFKGGPPP 786
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +3
Query: 630 PPPPXGXXFPFFXXXXXXXXGHXLFFXXXXXXPPXPKPPPPXXPPXXXPTLXXPXGXKXX 809
PPPP G P L PP P PPP PP P P G K
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGL--PPISGGPPPPPPPPGGCPPPPPP--PPPGGFKGG 783
Query: 810 XKXP 821
P
Sbjct: 784 PPPP 787
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 2/63 (3%)
Frame = +3
Query: 729 PXPKPPPPXXPPXXX--PTLXXPXGXKXXXKXPXTGXTXKRXXFRXFXPXPPPXRVXXPP 902
P P PPP PP P P G P P PP PP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 903 PPP 911
PPP
Sbjct: 786 PPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/64 (32%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Frame = +3
Query: 726 PPXPKPPPPXXPPXXXP--TLXXPXGXKXXXKXPXTGXTXKRXXFRXFXPXPPPXRVXXP 899
PP PPP PP P T P P +G P PPP P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP--------PPPPPPGGCPPP 771
Query: 900 PPPP 911
PPPP
Sbjct: 772 PPPP 775
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +1
Query: 778 PSXXPXGXKXXXXXPKXXXPQKGXXSGXFXPPPPPXGFXXLPPP 909
P P G P P G PPPPP GF PPP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPP-PPPPPPGGFKGGPPP 786
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +3
Query: 630 PPPPXGXXFPFFXXXXXXXXGHXLFFXXXXXXPPXPKPPPPXXPPXXXPTLXXPXGXKXX 809
PPPP G P L PP P PPP PP P P G K
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGL--PPISGGPPPPPPPPGGCPPPPPP--PPPGGFKGG 783
Query: 810 XKXP 821
P
Sbjct: 784 PPPP 787
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 2/63 (3%)
Frame = +3
Query: 729 PXPKPPPPXXPPXXX--PTLXXPXGXKXXXKXPXTGXTXKRXXFRXFXPXPPPXRVXXPP 902
P P PPP PP P P G P P PP PP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 903 PPP 911
PPP
Sbjct: 786 PPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/64 (32%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Frame = +3
Query: 726 PPXPKPPPPXXPPXXXP--TLXXPXGXKXXXKXPXTGXTXKRXXFRXFXPXPPPXRVXXP 899
PP PPP PP P T P P +G P PPP P
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP--------PPPPPPGGCPPP 354
Query: 900 PPPP 911
PPPP
Sbjct: 355 PPPP 358
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +1
Query: 778 PSXXPXGXKXXXXXPKXXXPQKGXXSGXFXPPPPPXGFXXLPPP 909
P P G P P G PPPPP GF PPP
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPP-PPPPPPGGFKGGPPP 369
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +3
Query: 630 PPPPXGXXFPFFXXXXXXXXGHXLFFXXXXXXPPXPKPPPPXXPPXXXPTLXXPXGXKXX 809
PPPP G P L PP P PPP PP P P G K
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGL--PPISGGPPPPPPPPGGCPPPPPP--PPPGGFKGG 366
Query: 810 XKXP 821
P
Sbjct: 367 PPPP 370
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 2/63 (3%)
Frame = +3
Query: 729 PXPKPPPPXXPPXXX--PTLXXPXGXKXXXKXPXTGXTXKRXXFRXFXPXPPPXRVXXPP 902
P P PPP PP P P G P P PP PP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Query: 903 PPP 911
PPP
Sbjct: 369 PPP 371
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/65 (32%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Frame = +3
Query: 726 PPXPKPPPPXXPPXXXPTLXXPXGXKXXXKXPXTGXTXKRXXFRXFXPXPP---PXRVXX 896
P P PPPP PP T P P T P PP P +
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPP-----PPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILP 1390
Query: 897 PPPPP 911
PPPPP
Sbjct: 1391 PPPPP 1395
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = -2
Query: 910 GGGGGXXTLXGGGXGXXXRKXXLFXVXPVXGXXXXXFXPXGXXRVGXXXGGXXGGGGFGX 731
GGGGG GGG P P G GG GGGG+
Sbjct: 364 GGGGGGGAAAGGGYNAGGGGGGAPQAAPAPQAAPAPAAPAGGGYNAGGGGGAGGGGGYAG 423
Query: 730 G 728
G
Sbjct: 424 G 424
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 27.1 bits (57), Expect(2) = 1.3
Identities = 18/60 (30%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = +3
Query: 738 KPPPPXXPPXXXPTLXXPXGXKXXXKXPXTGXTXKRXX--FRXFXPXPPPXRVXXPPPPP 911
+ PPP PP P P G P + P PPP PPPPP
Sbjct: 53 RKPPPSLPPSTMPP--GPHGMPFMGGPPPHHQYHLQYPPPHGLGPPPPPPHYYTQPPPPP 110
Score = 22.6 bits (46), Expect(2) = 1.3
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 735 PKPPPPXXPP 764
P PPPP PP
Sbjct: 22 PPPPPPPAPP 31
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/61 (32%), Positives = 23/61 (37%)
Frame = -2
Query: 907 GGGGXXTLXGGGXGXXXRKXXLFXVXPVXGXXXXXFXPXGXXRVGXXXGGXXGGGGFGXG 728
GGGG GGG G + + G G G GG GGGG+G G
Sbjct: 125 GGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGG------GGGDFGGYGGGGMGGGGYGGG 178
Query: 727 G 725
G
Sbjct: 179 G 179
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 27.1 bits (57), Expect(2) = 1.9
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 775 GXXXGGXXGGGGFGXGG 725
G GG GGGG+G GG
Sbjct: 45 GGGGGGGYGGGGYGGGG 61
Score = 21.8 bits (44), Expect(2) = 1.9
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 910 GGGGGXXTLXGGGXG 866
GGGGG GGG G
Sbjct: 31 GGGGGYSGGRGGGYG 45
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 726 PPXPKPPPPXXPPXXXPT 779
PP P PPPP PP P+
Sbjct: 357 PPPPPPPPPPPPPPQTPS 374
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 726 PPXPKPPPPXXPPXXXP 776
PP P PPPP PP P
Sbjct: 354 PPAPPPPPPPPPPPPPP 370
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/74 (31%), Positives = 24/74 (32%)
Frame = -2
Query: 910 GGGGGXXTLXGGGXGXXXRKXXLFXVXPVXGXXXXXFXPXGXXRVGXXXGGXXGGGGFGX 731
GG GG GGG G F G G GG GG G G
Sbjct: 329 GGRGGFDGGRGGGGGFRGGDRGGFRGGDRGGFRGGDRGGFRGGDRGGDRGGFRGGRGVG- 387
Query: 730 GGXXXXXQKKRXWP 689
GG Q+K WP
Sbjct: 388 GGNANMEQRKNDWP 401
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/81 (28%), Positives = 26/81 (32%), Gaps = 2/81 (2%)
Frame = +1
Query: 673 PXPPPRATXFFSXXPXXXXXXXXXXXXXXXXXSXQPSXXPXGXKXXXXXPKXXXPQ--KG 846
P PPP+ T P S +P P G P PQ G
Sbjct: 220 PPPPPKGTG----SPTPPPTGEPQDLSGEGNASRRPPPPPKGT-GSPPPPPTGEPQDLSG 274
Query: 847 XXSGXFXPPPPPXGFXXLPPP 909
+ PPPPP G PPP
Sbjct: 275 EGNASRRPPPPPKGTGTPPPP 295
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 835 PQKGXXSGXFXPPPPPXGFXXLPPP 909
P +G PPPPP G+ PPP
Sbjct: 201 PPQGMPGYPGGPPPPPHGYEGYPPP 225
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/60 (28%), Positives = 18/60 (30%)
Frame = +3
Query: 729 PXPKPPPPXXPPXXXPTLXXPXGXKXXXKXPXTGXTXKRXXFRXFXPXPPPXRVXXPPPP 908
P K PP PP P G P R P PPP + PPP
Sbjct: 1274 PLLKKKPPLQPPPPPQMTGPPIGIYPGPPAPGNLPGSSRPSGNRKQPLPPPPPMIRGPPP 1333
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/58 (32%), Positives = 21/58 (36%)
Frame = +3
Query: 738 KPPPPXXPPXXXPTLXXPXGXKXXXKXPXTGXTXKRXXFRXFXPXPPPXRVXXPPPPP 911
KPP P P PT+ P + P G T R P P PPPPP
Sbjct: 261 KPPTPTSRPTSAPTIP-PQPSANSTRAPDIGKTLSTQPPRR---TPQPHPKPPPPPPP 314
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/60 (28%), Positives = 18/60 (30%)
Frame = +3
Query: 729 PXPKPPPPXXPPXXXPTLXXPXGXKXXXKXPXTGXTXKRXXFRXFXPXPPPXRVXXPPPP 908
P K PP PP P G P R P PPP + PPP
Sbjct: 1274 PLLKKKPPLQPPPPPQMTGPPIGIYPGPPAPGNLPGSSRPSGNRKQPLPPPPPMIRGPPP 1333
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 24.6 bits (51), Expect(2) = 3.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 726 PPXPKPPPPXXPPXXXPTLXXP 791
PP P PP P P PT P
Sbjct: 295 PPLPPPPLPLSNPPAKPTPPPP 316
Score = 23.0 bits (47), Expect(2) = 3.9
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 867 PXPPPXRVXXPPPPP 911
P PPP PPP P
Sbjct: 314 PPPPPKPTIRPPPIP 328
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 24.6 bits (51), Expect(2) = 4.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 726 PPXPKPPPPXXPPXXXPTLXXP 791
PP P PP P P PT P
Sbjct: 73 PPLPPPPLPLSNPPAKPTPPPP 94
Score = 23.0 bits (47), Expect(2) = 4.0
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 867 PXPPPXRVXXPPPPP 911
P PPP PPP P
Sbjct: 92 PPPPPKPTIRPPPIP 106
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 848 PFPXXSPXPPPPXGXXSSPPP 910
P P P PPPP S+PPP
Sbjct: 4 PPPPPPPPPPPPPPAASAPPP 24
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 726 PPXPKPPPPXXPPXXXPTLXXP 791
PP P PPPP P PT P
Sbjct: 155 PPPPPPPPPVSVPSSKPTPPPP 176
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 729 PXPKPPPPXXPPXXXPTLXXP 791
P P PPPP PP P P
Sbjct: 2 PPPPPPPPPPPPPPPPAASAP 22
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 726 PPXPKPPPPXXPPXXXPTLXXP 791
PP P PPPP PP + P
Sbjct: 3 PPPPPPPPPPPPPPPAASAPPP 24
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 848 PFPXXSPXPPPPXGXXSSPPP 910
P P P PPPP S+PPP
Sbjct: 4 PPPPPPPPPPPPPPAASAPPP 24
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 726 PPXPKPPPPXXPPXXXPTLXXP 791
PP P PPPP P PT P
Sbjct: 155 PPPPPPPPPVSVPSSKPTPPPP 176
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 729 PXPKPPPPXXPPXXXPTLXXP 791
P P PPPP PP P P
Sbjct: 2 PPPPPPPPPPPPPPPPAASAP 22
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 726 PPXPKPPPPXXPPXXXPTLXXP 791
PP P PPPP PP + P
Sbjct: 3 PPPPPPPPPPPPPPPAASAPPP 24
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/61 (31%), Positives = 21/61 (34%)
Frame = +3
Query: 729 PXPKPPPPXXPPXXXPTLXXPXGXKXXXKXPXTGXTXKRXXFRXFXPXPPPXRVXXPPPP 908
P P PPPP P P+ P + P P PPP PPPP
Sbjct: 470 PKPAPPPPSRIPNPSPS---PQPAEVSKSPPPPPPLPPIATPSSVPPPPPP----PPPPP 522
Query: 909 P 911
P
Sbjct: 523 P 523
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 25.8 bits (54), Expect(2) = 5.2
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 867 PXPPPXRVXXPPPPP 911
P P P R PPPPP
Sbjct: 562 PEPEPVREPTPPPPP 576
Score = 21.4 bits (43), Expect(2) = 5.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 729 PXPKPPPPXXPPXXXPT 779
P P PPPP P PT
Sbjct: 546 PTP-PPPPREPTPREPT 561
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Frame = +3
Query: 726 PPXPK-PPPPXXPPXXXPTLXXPXGXKXXXKXPXTGXTXKRXXFRXFXPXPPPXRVXXPP 902
PP K PPPP PT P P T T K P P P P
Sbjct: 177 PPTTKAPPPPTTKAPPPPTTKAPPPPTTKAPPPPT--TNKEVTTVAPVPKPAPVTAPAPN 234
Query: 903 PP 908
PP
Sbjct: 235 PP 236
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 867 PXPPPXRVXXPPPPP 911
P PPP V PPPPP
Sbjct: 784 PVPPPPPVPPPPPPP 798
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 28.7 bits (61), Expect = 6.1
Identities = 22/71 (30%), Positives = 25/71 (35%)
Frame = -2
Query: 910 GGGGGXXTLXGGGXGXXXRKXXLFXVXPVXGXXXXXFXPXGXXRVGXXXGGXXGGGGFGX 731
GGGGG GGG G G G G GG GGGG+G
Sbjct: 220 GGGGGGGYGSGGGWGGGG------------GGRDRDRGGWGGGGGGRGYGGGGGGGGYGY 267
Query: 730 GGXXXXXQKKR 698
GG ++ R
Sbjct: 268 GGGGGGRRRSR 278
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 867 PXPPPXRVXXPPPPP 911
P PPP + PPPPP
Sbjct: 790 PPPPPLGIIPPPPPP 804
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 726 PPXPKPPPPXXPP 764
PP P PPPP PP
Sbjct: 135 PPPPSPPPPPPPP 147
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 854 PXXSPXPPPPXGXXSSPP 907
P P PPPP G +SPP
Sbjct: 328 PPAPPPPPPPIGGLTSPP 345
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 845 GPFPXXSPXPPPPXGXXSSPP 907
GP+P P PPP SSPP
Sbjct: 347 GPYPPFFPPPPPHFMRPSSPP 367
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 845 GPFPXXSPXPPPPXGXXSSPP 907
GP+P P PPP SSPP
Sbjct: 347 GPYPPFFPPPPPHFMRPSSPP 367
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 775 GXXXGGXXGGGGFGXGG 725
G GG GGGGFG GG
Sbjct: 594 GNGGGGNGGGGGFGGGG 610
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 867 PXPPPXRVXXPPPPP 911
P PPP + PPPPP
Sbjct: 790 PPPPPLGIIPPPPPP 804
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 23.4 bits (48), Expect(2) = 9.6
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 867 PXPPPXRVXXPPPPP 911
P P P PPPPP
Sbjct: 112 PPPAPAAPCCPPPPP 126
Score = 23.0 bits (47), Expect(2) = 9.6
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 726 PPXPKPPPPXXPP 764
PP P PPPP PP
Sbjct: 85 PPAPLPPPP--PP 95
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,553,146
Number of Sequences: 27780
Number of extensions: 230538
Number of successful extensions: 3472
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2180
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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