Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_B11
(907 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 50 2e-06
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 46 3e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 46 3e-05
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 46 3e-05
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 45 7e-05
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 40 0.003
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 40 0.003
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 39 0.004
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 39 0.004
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 39 0.004
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 39 0.004
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 39 0.004
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 39 0.004
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 39 0.004
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 38 0.007
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 38 0.007
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 38 0.007
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 38 0.010
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 38 0.010
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 38 0.013
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 38 0.013
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 36 0.030
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 36 0.030
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 35 0.092
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 34 0.16
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 34 0.16
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 34 0.16
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 34 0.16
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 33 0.21
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 33 0.21
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 33 0.21
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 33 0.28
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.28
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 33 0.28
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 33 0.28
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 33 0.28
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 33 0.28
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 33 0.28
U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna bi... 33 0.37
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 32 0.49
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 31 1.1
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 31 1.1
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 31 1.1
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 30 2.0
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 30 2.0
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 30 2.0
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 29 3.5
Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 29 4.6
U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein. 29 4.6
U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of... 29 4.6
AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical... 29 4.6
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 29 4.6
U46674-4|AAA85756.1| 574|Caenorhabditis elegans Hypothetical pr... 29 6.0
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 29 6.0
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical pr... 28 8.0
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 28 8.0
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 28 8.0
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 28 8.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 8.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 8.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 8.0
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/67 (35%), Positives = 40/67 (59%)
Frame = +3
Query: 168 TKVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCGFVHMQTEEQAAAAIRALHNSTFN 347
+K+FVG+LP L+++F+ F VTECDI+ FVH++ E+ I L T +
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE-EDDVDPIITRLTGYTID 61
Query: 348 GGVISVE 368
G V++++
Sbjct: 62 GKVVNIK 68
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/67 (35%), Positives = 40/67 (59%)
Frame = +3
Query: 168 TKVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCGFVHMQTEEQAAAAIRALHNSTFN 347
+K+FVG+LP L+++F+ F VTECDI+ FVH++ E+ I L T +
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE-EDDVDPIITRLTGYTID 61
Query: 348 GGVISVE 368
G V++++
Sbjct: 62 GKVVNIK 68
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Frame = +3
Query: 168 TKVFVGSLPQGSKPEDLRKLFERFGVVTECDIM------NRCGFVHMQTEEQAAAAIRAL 329
T V+V + E L KLF +FG +T C++M GFV E+A A++AL
Sbjct: 153 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 212
Query: 330 HNSTFNG 350
H+ST G
Sbjct: 213 HDSTIEG 219
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Frame = +3
Query: 168 TKVFVGSLPQGSKPEDLRKLFERFGVVTECDIM------NRCGFVHMQTEEQAAAAIRAL 329
T V+V + E L KLF +FG +T C++M GFV E+A A++AL
Sbjct: 150 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 209
Query: 330 HNSTFNG 350
H+ST G
Sbjct: 210 HDSTIEG 216
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Frame = +3
Query: 168 TKVFVGSLPQGSKPEDLRKLFERFGVVTECDIM------NRCGFVHMQTEEQAAAAIRAL 329
T V+V + E L KLF +FG +T C++M GFV E+A A++AL
Sbjct: 213 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 272
Query: 330 HNSTFNG 350
H+ST G
Sbjct: 273 HDSTIEG 279
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 45.2 bits (102), Expect = 7e-05
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Frame = +3
Query: 168 TKVFVGSLPQGSKPEDLRKLFERFGVVTECDIM------NRCGFVHMQTEEQAAAAIRAL 329
T V+V + E L K+F +FG +T C++M GFV E+A A++AL
Sbjct: 213 TNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 272
Query: 330 HNSTFNG 350
H+ST G
Sbjct: 273 HDSTIEG 279
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIM------NRCGFVHMQTEEQAAAAIRALH 332
++ V ++P + DL+ +FE+FGVV++ +I+ GFV M+ + A A + LH
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELH 213
Query: 333 NSTFNGGVISV 365
S G I V
Sbjct: 214 GSMIEGRKIEV 224
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIM------NRCGFVHMQTEEQAAAAIRALH 332
++ V ++P + DL+ +FE+FGVV++ +I+ GFV M+ + A A + LH
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELH 213
Query: 333 NSTFNGGVISV 365
S G I V
Sbjct: 214 GSMIEGRKIEV 224
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIM--------NRCGFVHMQTEEQAAAAIRA 326
K+FVG +P+ D R+LFE++G V C+I+ C FV + A A A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 327 LHN 335
LHN
Sbjct: 116 LHN 118
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Frame = +3
Query: 165 QTKVFVGSLPQGSKPEDLRKLFERFGVVTECDIM-------NRCGFVHMQTEEQAAAAIR 323
+ K+F+G L + E+LR++F +FG + +C ++ C FV A A +
Sbjct: 141 ERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATK 200
Query: 324 ALHNS 338
+H+S
Sbjct: 201 EMHHS 205
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIM--------NRCGFVHMQTEEQAAAAIRA 326
K+FVG +P+ D R+LFE++G V C+I+ C FV + A A A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 327 LHN 335
LHN
Sbjct: 116 LHN 118
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Frame = +3
Query: 165 QTKVFVGSLPQGSKPEDLRKLFERFGVVTECDIM-------NRCGFVHMQTEEQAAAAIR 323
+ K+F+G L + E+LR++F +FG + +C ++ C FV A A +
Sbjct: 141 ERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATK 200
Query: 324 ALHNS 338
+H+S
Sbjct: 201 EMHHS 205
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIM--------NRCGFVHMQTEEQAAAAIRA 326
K+FVG +P+ D R+LFE++G V C+I+ C FV + A A A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 327 LHN 335
LHN
Sbjct: 116 LHN 118
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Frame = +3
Query: 165 QTKVFVGSLPQGSKPEDLRKLFERFGVVTECDIM-------NRCGFVHMQTEEQAAAAIR 323
+ K+F+G L + E+LR++F +FG + +C ++ C FV A A +
Sbjct: 141 ERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATK 200
Query: 324 ALHNS 338
+H+S
Sbjct: 201 EMHHS 205
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIM--------NRCGFVHMQTEEQAAAAIRA 326
K+FVG +P+ D R+LFE++G V C+I+ C FV + A A A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 327 LHN 335
LHN
Sbjct: 116 LHN 118
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Frame = +3
Query: 165 QTKVFVGSLPQGSKPEDLRKLFERFGVVTECDIM-------NRCGFVHMQTEEQAAAAIR 323
+ K+F+G L + E+LR++F +FG + +C ++ C FV A A +
Sbjct: 141 ERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATK 200
Query: 324 ALHNS 338
+H+S
Sbjct: 201 EMHHS 205
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIM--------NRCGFVHMQTEEQAAAAIRA 326
K+FVG +P+ D R+LFE++G V C+I+ C FV + A A A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 327 LHN 335
LHN
Sbjct: 116 LHN 118
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Frame = +3
Query: 165 QTKVFVGSLPQGSKPEDLRKLFERFGVVTECDIM-------NRCGFVHMQTEEQAAAAIR 323
+ K+F+G L + E+LR++F +FG + +C ++ C FV A A +
Sbjct: 141 ERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATK 200
Query: 324 ALHNS 338
+H+S
Sbjct: 201 EMHHS 205
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIM--------NRCGFVHMQTEEQAAAAIRA 326
K+FVG +P+ D R+LFE++G V C+I+ C FV + A A A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 327 LHN 335
LHN
Sbjct: 116 LHN 118
Score = 33.9 bits (74), Expect = 0.16
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +3
Query: 165 QTKVFVGSLPQGSKPEDLRKLFERFGVVTECDIM 266
+ K+F+G L + E+LR++F +FG + +C ++
Sbjct: 141 ERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVL 174
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIM--------NRCGFVHMQTEEQAAAAIRA 326
K+FVG +P+ D R+LFE++G V C+I+ C FV + A A A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 327 LHN 335
LHN
Sbjct: 116 LHN 118
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Frame = +3
Query: 165 QTKVFVGSLPQGSKPEDLRKLFERFGVVTECDIM-------NRCGFVHMQTEEQAAAAIR 323
+ K+F+G L + E+LR++F +FG + +C ++ C FV A A +
Sbjct: 141 ERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATK 200
Query: 324 ALHNS 338
+H+S
Sbjct: 201 EMHHS 205
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNR---CGFVHMQTEEQAAAAIRALHNST 341
KV+VG LP + ++L ++F+RFG + + + R FV A A+RAL S
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 342 FNGGVISVE 368
G VE
Sbjct: 64 ICGVRARVE 72
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNR---CGFVHMQTEEQAAAAIRALHNST 341
KV+VG LP + ++L ++F+RFG + + + R FV A A+RAL S
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 342 FNGGVISVE 368
G VE
Sbjct: 64 ICGVRARVE 72
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNR---CGFVHMQTEEQAAAAIRALHNST 341
KV+VG LP + ++L ++F+RFG + + + R FV A A+RAL S
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 342 FNGGVISVE 368
G VE
Sbjct: 64 ICGVRARVE 72
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCG----FVHMQTEEQAAAAIRALHNS 338
KV+VG+LP + +++ +F ++G + DI + G FV + A A+RA
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 339 TFNGGVISVE 368
F+G I VE
Sbjct: 70 EFDGRRIRVE 79
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCG----FVHMQTEEQAAAAIRALHNS 338
KV+VG+LP + +++ +F ++G + DI + G FV + A A+RA
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 339 TFNGGVISVE 368
F+G I VE
Sbjct: 70 EFDGRRIRVE 79
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 37.5 bits (83), Expect = 0.013
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNR-CGFVHMQTEEQAAAAIRALHNSTFN 347
++FVG+LP K +L++LF G + EC + + F+ + T A +A A+ +
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDGRIIH 176
Query: 348 GGVISV 365
G + V
Sbjct: 177 GRQVRV 182
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 37.5 bits (83), Expect = 0.013
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNR-CGFVHMQTEEQAAAAIRALHNSTFN 347
++FVG+LP K +L++LF G + EC + + F+ + T A +A A+ +
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDGRIIH 176
Query: 348 GGVISV 365
G + V
Sbjct: 177 GRQVRV 182
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 37.1 bits (82), Expect = 0.017
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 168 TKVFVGSLPQGSKPEDLRKLFERFGVVTECDIM--NRCGFVHMQTEEQAAAAIRALHNST 341
T V+VG++ Q + DLR LF +G + E I R FV + +E A AI ++
Sbjct: 237 TSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKE 296
Query: 342 FNGGVI 359
G +
Sbjct: 297 MAGNQV 302
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 36.3 bits (80), Expect = 0.030
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIM 266
K+FVG +P+ + +DLR LFE+FG + E I+
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTIL 61
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 36.3 bits (80), Expect = 0.030
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCGFVHMQTEEQAAAAIRALHNSTFNG 350
+V++G LP + D+ F +G +++ + N GFV Q + A A+ L+ G
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELCG 62
Query: 351 GVISVE 368
+ +E
Sbjct: 63 ERVILE 68
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 36.3 bits (80), Expect = 0.030
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIM 266
K+FVG +P+ + +DLR LFE+FG + E I+
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTIL 61
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 34.7 bits (76), Expect = 0.092
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIM-----NRC-GF--VHMQTEEQAAAAIRA 326
++F+ +LP +K +DL+ LF+++G V+E ++ C GF V E A AA A
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSA 339
Query: 327 LHNSTFNGGVISV 365
L F G ++ +
Sbjct: 340 LDGYVFKGRMMHI 352
Score = 31.9 bits (69), Expect = 0.65
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +3
Query: 168 TKVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCG---FVHMQTEEQAAAAIRALHNS 338
T + +LP G + E+L+++FE+FG T+ + G V M A A RAL S
Sbjct: 483 TVMLAKNLPAGVESEELQRMFEKFGDCTKVLMPTEGGVSALVIMGNPVDAKKAFRALAYS 542
Query: 339 TFNGGVISVE 368
F + +E
Sbjct: 543 RFRSQPLYLE 552
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Frame = +3
Query: 168 TKVFVGSLPQGSKPEDLRKLFERFGVVTECDI-------MNRCGFVHMQTEEQAAAAIRA 326
T++ V +LP + LRK FE++G +++ + FV E A+ A+
Sbjct: 3 TRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALAK 62
Query: 327 LHNSTFNGGVISVE 368
+ + FN ++VE
Sbjct: 63 SNQTFFNSKKLTVE 76
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 33.9 bits (74), Expect = 0.16
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIM 266
K+F+G L + E+LR F RFG V EC +M
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVM 77
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIM--------NRCGFVHMQTEEQAAAAIRA 326
KVF+G L S ED+++ FE +G V + +M GFV ++E A +
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDE-VADKVCE 193
Query: 327 LHNSTFNGGVI 359
+H NG ++
Sbjct: 194 IHFHEINGKMV 204
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 33.9 bits (74), Expect = 0.16
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECD 260
KVFVG LP +DLR FE+FG V + +
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIE 140
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 33.9 bits (74), Expect = 0.16
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECD 260
KVFVG LP +DLR FE+FG V + +
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIE 140
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 33.9 bits (74), Expect = 0.16
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIM 266
K+F+G L + E+LR F RFG V EC +M
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVM 77
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIM--------NRCGFVHMQTEEQAAAAIRA 326
KVF+G L S ED+++ FE +G V + +M GFV ++E A +
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDE-VADKVCE 193
Query: 327 LHNSTFNGGVI 359
+H NG ++
Sbjct: 194 IHFHEINGKMV 204
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNR------CGFVHMQTEEQAAAAIRALH 332
+++V ++P + +DL +F +G V +I+ GFV + + E A ALH
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAALH 111
Query: 333 NSTFNGGVISV 365
S G +I V
Sbjct: 112 ESHVQGRIIEV 122
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCGFVHMQTEEQAA 311
++FVG+LP K +L++LF G + EC + + GF ++ AA
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYLSGK-GFAFLRLISNAA 162
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNR------CGFVHMQTEEQAAAAIRALH 332
+++V ++P + +DL +F +G V +I+ GFV + + E A ALH
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAALH 111
Query: 333 NSTFNGGVISV 365
S G +I V
Sbjct: 112 ESHVQGRIIEV 122
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 168 TKVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCG--FVHMQTEEQAAAAIRALHNST 341
T V+VG++ ++ E +R+ F FG +TE I G FV ++ AA AI ++N
Sbjct: 128 TSVYVGNIASLTEDE-IRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQD 186
Query: 342 FNGGVI 359
G ++
Sbjct: 187 VGGQLV 192
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 168 TKVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCG--FVHMQTEEQAAAAIRALHNST 341
T V+VG++ ++ E +R+ F FG +TE I G FV ++ AA AI ++N
Sbjct: 138 TSVYVGNIASLTEDE-IRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQD 196
Query: 342 FNGGVI 359
G ++
Sbjct: 197 VGGQLV 202
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 168 TKVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCG--FVHMQTEEQAAAAIRALHNST 341
T V+VG++ ++ E +R+ F FG +TE I G FV ++ AA AI ++N
Sbjct: 241 TSVYVGNIASLTEDE-IRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQD 299
Query: 342 FNGGVI 359
G ++
Sbjct: 300 VGGQLV 305
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 168 TKVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCG--FVHMQTEEQAAAAIRALHNST 341
T V+VG++ ++ E +R+ F FG +TE I G FV ++ AA AI ++N
Sbjct: 209 TSVYVGNIASLTEDE-IRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQD 267
Query: 342 FNGGVI 359
G ++
Sbjct: 268 VGGQLV 273
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 33.1 bits (72), Expect = 0.28
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Frame = +3
Query: 174 VFVGSLPQGSKPEDLRKLFERFGVVTECDIMN------RCGFVHMQTEEQAAAA 317
+FVG++P K ++R +FE G V E DI FV QT +QA A
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 224
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 33.1 bits (72), Expect = 0.28
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Frame = +3
Query: 174 VFVGSLPQGSKPEDLRKLFERFGVVTECDIMN------RCGFVHMQTEEQAAAA 317
+FVG++P K ++R +FE G V E DI FV QT +QA A
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 224
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 33.1 bits (72), Expect = 0.28
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Frame = +3
Query: 174 VFVGSLPQGSKPEDLRKLFERFGVVTECDIMN------RCGFVHMQTEEQAAAA 317
+FVG++P K ++R +FE G V E DI FV QT +QA A
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 201
>U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 3 protein.
Length = 217
Score = 32.7 bits (71), Expect = 0.37
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +3
Query: 159 VPQTKVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRC---GFVHMQTEEQAAAAIRAL 329
+P +F ++P+G++PE ++ +F +F + E M F+ ++E+ + A +AL
Sbjct: 140 LPNNILFCSNIPEGTEPEQIQTIFSQFPGLREVRWMPNTKDFAFIEYESEDLSEPARQAL 199
Query: 330 HN 335
N
Sbjct: 200 DN 201
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 32.3 bits (70), Expect = 0.49
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 168 TKVFVGSLPQGSKPEDLRKLFERFGVVTECDIM 266
TK+FVG LP + + L + FE+FG + E ++
Sbjct: 35 TKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVI 67
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 31.5 bits (68), Expect = 0.86
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +3
Query: 162 PQTKVFVGSLPQGSKPEDLRKLFERFGVVTECDIM--------NRCGFVHMQTEEQAAAA 317
P + V +L + +DLR +F FG + +CD++ GF++ E A AA
Sbjct: 74 PSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAA 133
Query: 318 IRALHNSTFNGGVISVE 368
L N+ +G I V+
Sbjct: 134 RDKLCNTDLDGHKIRVD 150
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/60 (21%), Positives = 26/60 (43%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCGFVHMQTEEQAAAAIRALHNSTFNG 350
++++G L +D+ F +G + + + N GFV + A A+ L+ G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/60 (21%), Positives = 26/60 (43%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCGFVHMQTEEQAAAAIRALHNSTFNG 350
++++G L +D+ F +G + + + N GFV + A A+ L+ G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/60 (21%), Positives = 26/60 (43%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCGFVHMQTEEQAAAAIRALHNSTFNG 350
++++G L +D+ F +G + + + N GFV + A A+ L+ G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Frame = +3
Query: 156 MVPQTKVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRC-------GFVHMQTEEQA 308
++P ++FVG P + +LR+ FE+F V + ++ GF+ +TE+QA
Sbjct: 63 LIPN-RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQA 119
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Frame = +3
Query: 156 MVPQTKVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRC-------GFVHMQTEEQA 308
++P ++FVG P + +LR+ FE+F V + ++ GF+ +TE+QA
Sbjct: 64 LIPN-RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQA 120
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 162 PQTKVFVGSLPQGSKPEDLRKLFERFGVVTECDIM 266
P+ +FV L + EDL +F RFG + C+I+
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIV 273
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 162 PQTKVFVGSLPQGSKPEDLRKLFERFGVVTECDIM 266
P+ +FV L + EDL +F RFG + C+I+
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIV 273
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 162 PQTKVFVGSLPQGSKPEDLRKLFERFGVVTECDIM 266
P+ +FV L + EDL +F RFG + C+I+
Sbjct: 170 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIV 204
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Frame = +3
Query: 168 TKVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRC-------GFVHMQTEEQAAAAIRA 326
T VFV + + E L +F +FG +T +M GFV ++ A A+
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 327 LHNSTFNG 350
L++S G
Sbjct: 298 LNDSILEG 305
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Frame = +3
Query: 168 TKVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRC-------GFVHMQTEEQAAAAIRA 326
T VFV + + E L +F +FG +T +M GFV ++ A A+
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 327 LHNSTFNG 350
L++S G
Sbjct: 298 LNDSILEG 305
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +3
Query: 222 KLFERFGVVTE----CDIMNRCGFVHMQTEEQAAAAIRALHNSTFNGGVISV 365
+L++ FG +T+ C + + GFV T A I + T NG +ISV
Sbjct: 111 ELYQAFGGITDGVVQCHVADGYGFVLFDTRANAQKKIVEMDGKTLNGKLISV 162
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 9/78 (11%)
Frame = -2
Query: 723 RHREAHRNVAYPPPLRCDSGSVRQGKQAPA---------VHKRP*GRDPSARTHAGPRRT 571
R RE R + PP R S R+ ++P +R R P R+ + PRR
Sbjct: 79 RKREPIRAPSASPPRRRRDDSPRKRSRSPPRRTRRSPSPPRRRRISRSPVRRSRSPPRRQ 138
Query: 570 HSARHRAPPADRVRSRAP 517
S PP + RSR+P
Sbjct: 139 VSRSRSPPPRRQQRSRSP 156
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = +3
Query: 666 QNHISVVEGTRRYDEPPYDDRHYDERAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPX 845
Q +S EG+ + +H D Q P P + P RR+ + Y RGGP
Sbjct: 800 QRRLSKFEGSIQNLRAATSTQHLDSMQQLHFPMPDYEPPQPPQQRRRTESSGY--RGGPP 857
Query: 846 P 848
P
Sbjct: 858 P 858
>Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 29.1 bits (62), Expect = 4.6
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Frame = -2
Query: 744 RARRSXGRHREAHRNVAYPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHS 565
R R RE R+ PPP R S APA + R R PS RR +
Sbjct: 251 REIRDSREPREVRRS---PPPRRAASPRKASSPSAPAKNDRKRERSPSGSVAPSVRRESA 307
Query: 564 A----RHRAPPADRVRSRAPDLAGP 502
+ R R P R++ P L P
Sbjct: 308 SPPRRRARIIPRYECRAQKPALLSP 332
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 29.1 bits (62), Expect = 4.6
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Frame = -2
Query: 744 RARRSXGRHREAHRNVAYPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHS 565
R R RE R+ PPP R S APA + R R PS RR +
Sbjct: 251 REIRDSREPREVRRS---PPPRRAASPRKASSPSAPAKNDRKRERSPSGSVAPSVRRESA 307
Query: 564 A----RHRAPPADRVRSRAPDLAGP 502
+ R R P R++ P L P
Sbjct: 308 SPPRRRARIIPRYECRAQKPALLSP 332
>U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein.
Length = 449
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -2
Query: 795 TCPR*VCGEQVSGVHTVRARRSXGRHREAHRNVAYPPPLRCDSG 664
TCP + E+ SG+H + RH++ R +AYP D G
Sbjct: 150 TCP--ILSEKWSGIHVSGDQLKGQRHKQEDRFLAYPNGQYMDRG 191
>U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of xx
and xo animalsprotein 2 protein.
Length = 449
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -2
Query: 795 TCPR*VCGEQVSGVHTVRARRSXGRHREAHRNVAYPPPLRCDSG 664
TCP + E+ SG+H + RH++ R +AYP D G
Sbjct: 150 TCP--ILSEKWSGIHVSGDQLKGQRHKQEDRFLAYPNGQYMDRG 191
>AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 29.1 bits (62), Expect = 4.6
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Frame = -2
Query: 744 RARRSXGRHREAHRNVAYPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHS 565
R R RE R+ PPP R S APA + R R PS RR +
Sbjct: 251 REIRDSREPREVRRS---PPPRRAASPRKASSPSAPAKNDRKRERSPSGSVAPSVRRESA 307
Query: 564 A----RHRAPPADRVRSRAPDLAGP 502
+ R R P R++ P L P
Sbjct: 308 SPPRRRARIIPRYECRAQKPALLSP 332
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 29.1 bits (62), Expect = 4.6
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Frame = -2
Query: 744 RARRSXGRHREAHRNVAYPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHS 565
R R RE R+ PPP R S APA + R R PS RR +
Sbjct: 251 REIRDSREPREVRRS---PPPRRAASPRKASSPSAPAKNDRKRERSPSGSVAPSVRRESA 307
Query: 564 A----RHRAPPADRVRSRAPDLAGP 502
+ R R P R++ P L P
Sbjct: 308 SPPRRRARIIPRYECRAQKPALLSP 332
>U46674-4|AAA85756.1| 574|Caenorhabditis elegans Hypothetical
protein T26A8.4 protein.
Length = 574
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 705 DEPPYDDRHYDERAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGG 839
+E P+ D Y + R P+H +GD + RS P Y GRGG
Sbjct: 111 EEEPFSDTDYRVNRR-RRLSPSHD--DGD-FDPRSKRPYYGGRGG 151
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFG 242
KVFVG LP K D+ F R+G
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYG 112
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 28.3 bits (60), Expect = 8.0
Identities = 20/73 (27%), Positives = 29/73 (39%)
Frame = -2
Query: 738 RRSXGRHREAHRNVAYPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHSAR 559
RR +E+ + A PP R S S + + R R S R +R
Sbjct: 147 RRRRSDSQESSKRSASPPVRRGRSKSRSRSRSPSRSRSRSRSRSVSRSKSPASRNGRVSR 206
Query: 558 HRAPPADRVRSRA 520
HR+ +R RSR+
Sbjct: 207 HRSRSQNRSRSRS 219
>Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical
protein Y57G11C.9a protein.
Length = 553
Score = 28.3 bits (60), Expect = 8.0
Identities = 20/73 (27%), Positives = 29/73 (39%)
Frame = -2
Query: 738 RRSXGRHREAHRNVAYPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHSAR 559
RR +E+ + A PP R S S + + R R S R +R
Sbjct: 147 RRRRSDSQESSKRSASPPVRRGRSKSRSRSRSPSRSRSRSRSRSVSRSKSPASRNGRVSR 206
Query: 558 HRAPPADRVRSRA 520
HR+ +R RSR+
Sbjct: 207 HRSRSQNRSRSRS 219
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 28.3 bits (60), Expect = 8.0
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIM 266
K+FVG L + + +R+ + +FG +T+ +M
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVM 55
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 28.3 bits (60), Expect = 8.0
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIM 266
K+FVG L + + +R+ + +FG +T+ +M
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVM 55
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 28.3 bits (60), Expect = 8.0
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +3
Query: 171 KVFVGSLPQGSKPEDLRKLFERFGVVTECDIM 266
K+FVG L + + +R+ + +FG +T+ +M
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVM 55
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 8.0
Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Frame = -2
Query: 687 PPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTH-AGPRRTHSARHRAPPADRVRSRAPDL 511
PP S RQ + P G P+ R H GP ++ S+ R P R R+P
Sbjct: 436 PPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESSESREGP--RGPRRSPPT 493
Query: 510 AGPSCMVRPEAGARVARG 457
P P GA +G
Sbjct: 494 GSPP-TGSPPTGAPPKKG 510
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 8.0
Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Frame = -2
Query: 687 PPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTH-AGPRRTHSARHRAPPADRVRSRAPDL 511
PP S RQ + P G P+ R H GP ++ S+ R P R R+P
Sbjct: 457 PPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESSESREGP--RGPRRSPPT 514
Query: 510 AGPSCMVRPEAGARVARG 457
P P GA +G
Sbjct: 515 GSPP-TGSPPTGAPPKKG 531
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 8.0
Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Frame = -2
Query: 687 PPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTH-AGPRRTHSARHRAPPADRVRSRAPDL 511
PP S RQ + P G P+ R H GP ++ S+ R P R R+P
Sbjct: 442 PPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESSESREGP--RGPRRSPPT 499
Query: 510 AGPSCMVRPEAGARVARG 457
P P GA +G
Sbjct: 500 GSPP-TGSPPTGAPPKKG 516
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,467,359
Number of Sequences: 27780
Number of extensions: 390120
Number of successful extensions: 1282
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1272
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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