Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_B10
         (1024 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1174 - 26696869-26698191                                         30   2.6  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    30   3.4  
07_03_1160 - 24430240-24431268                                         29   4.5  
03_02_0283 - 7078754-7078856,7079358-7079431,7079995-7080090,708...    29   5.9  

>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 16/56 (28%), Positives = 18/56 (32%)
 Frame = +3

Query: 261 PXXDPPLRNPXGPXGTXXXXXPGPRARXXPXGGXXRRPXXLXGXRDPPPPXXXXXP 428
           P   PP   P  P  T     P P+    P     + P  L     PPPP     P
Sbjct: 221 PPPPPPTVPPRTPGDTPAVVEPKPQPPPPPPRAPVKMPRVLEPKPSPPPPSPLPPP 276


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -1

Query: 955  APPXPXGQXXGPPPPXG 905
            APP P G   GPPPP G
Sbjct: 1206 APPMPPGVPGGPPPPPG 1222


>07_03_1160 - 24430240-24431268
          Length = 342

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 17/62 (27%), Positives = 17/62 (27%)
 Frame = +3

Query: 273 PPLRNPXGPXGTXXXXXPGPRARXXPXGGXXRRPXXLXGXRDPPPPXXXXXPXTHXXDQX 452
           PP  NP GP        P P     P       P        PP P     P      Q 
Sbjct: 271 PPQPNPNGPPKPDQPPQPNPNGPSKPDQPPRPNPDMPPKPDQPPQPEYYEQPPKPDAPQM 330

Query: 453 PP 458
           PP
Sbjct: 331 PP 332


>03_02_0283 -
           7078754-7078856,7079358-7079431,7079995-7080090,
           7080145-7080270,7080856-7080939,7081458-7081506,
           7081630-7081688,7081908-7081925,7082141-7082620
          Length = 362

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 15/50 (30%), Positives = 16/50 (32%)
 Frame = +3

Query: 261 PXXDPPLRNPXGPXGTXXXXXPGPRARXXPXGGXXRRPXXLXGXRDPPPP 410
           P   PP  +P  P        P PRA         RR         PPPP
Sbjct: 5   PPQRPPATSPPAPAAAAASPQPLPRAFLAAAASSPRRAAASPAPAPPPPP 54


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,604,811
Number of Sequences: 37544
Number of extensions: 289457
Number of successful extensions: 976
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3001039372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)