Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_B09
         (809 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4PM22 Cluster: Tetratricopeptide repeat protein; n=2; ...    63   7e-09
UniRef50_Q9Y3D6 Cluster: Mitochondrial fission 1 protein; n=17; ...    59   1e-07
UniRef50_UPI0000E494FD Cluster: PREDICTED: similar to Mitochondr...    42   0.018
UniRef50_Q15Z34 Cluster: AMP-dependent synthetase and ligase; n=...    34   3.7  
UniRef50_Q5KHD1 Cluster: Mitochondria fission 1 protein; n=2; Fi...    33   8.5  

>UniRef50_Q4PM22 Cluster: Tetratricopeptide repeat protein; n=2;
           Arthropoda|Rep: Tetratricopeptide repeat protein -
           Ixodes scapularis (Black-legged tick) (Deer tick)
          Length = 162

 Score = 63.3 bits (147), Expect = 7e-09
 Identities = 25/54 (46%), Positives = 37/54 (68%)
 Frame = +1

Query: 124 MEDVLDEIVSSEDLQKFERVFHEQLHQGNVXHKAQFEYXWCLVRXKXPTDXQXG 285
           ME +L++ VS  DL+ +E+ +HE++ +G V  K QFEY WCLVR + P D + G
Sbjct: 1   MESILEDYVSPSDLKCYEQQYHEEMKKGEVAPKTQFEYAWCLVRSRYPADIRRG 54


>UniRef50_Q9Y3D6 Cluster: Mitochondrial fission 1 protein; n=17;
           Eumetazoa|Rep: Mitochondrial fission 1 protein - Homo
           sapiens (Human)
          Length = 152

 Score = 59.3 bits (137), Expect = 1e-07
 Identities = 28/54 (51%), Positives = 34/54 (62%)
 Frame = +1

Query: 124 MEDVLDEIVSSEDLQKFERVFHEQLHQGNVXHKAQFEYXWCLVRXKXPTDXQXG 285
           ME VL+E+VS EDL KFE+ F  +   G+V    QFEY WCLVR K   D + G
Sbjct: 1   MEAVLNELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKG 54


>UniRef50_UPI0000E494FD Cluster: PREDICTED: similar to Mitochondrial
           fission 1 protein (Fis1 homolog) (rFis1)
           (Tetratricopeptide repeat protein 11) (TPR repeat
           protein 11); n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to Mitochondrial fission 1 protein
           (Fis1 homolog) (rFis1) (Tetratricopeptide repeat protein
           11) (TPR repeat protein 11) - Strongylocentrotus
           purpuratus
          Length = 177

 Score = 41.9 bits (94), Expect = 0.018
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = +1

Query: 163 LQKFERVFHEQLHQGNVXHKAQFEYXWCLVRXKXPTDXQXG 285
           +QK E++++ +L QG V    QF+Y WCLVR +   D + G
Sbjct: 42  IQKHEQLYNAELAQGRVTVGTQFQYAWCLVRSRYRDDMRRG 82


>UniRef50_Q15Z34 Cluster: AMP-dependent synthetase and ligase; n=1;
           Pseudoalteromonas atlantica T6c|Rep: AMP-dependent
           synthetase and ligase - Pseudoalteromonas atlantica
           (strain T6c / BAA-1087)
          Length = 531

 Score = 34.3 bits (75), Expect = 3.7
 Identities = 19/60 (31%), Positives = 31/60 (51%)
 Frame = +1

Query: 148 VSSEDLQKFERVFHEQLHQGNVXHKAQFEYXWCLVRXKXPTDXQXGSYXXKNWSTPXPEG 327
           ++S+ L+K  +VF  Q+H G+   + +F    C+ R K PT+   G+Y    W  P   G
Sbjct: 302 MNSKSLEKVRKVFGCQMHLGS--GQTEFAPVACMYRDKTPTEFSEGNY----WGVPVCTG 355


>UniRef50_Q5KHD1 Cluster: Mitochondria fission 1 protein; n=2;
           Filobasidiella neoformans|Rep: Mitochondria fission 1
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 154

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 11/40 (27%), Positives = 25/40 (62%)
 Frame = +1

Query: 148 VSSEDLQKFERVFHEQLHQGNVXHKAQFEYXWCLVRXKXP 267
           +S ++L+   R ++ ++ QG+V  +++F Y W L++   P
Sbjct: 15  LSPDELEVLRRQYYREIEQGHVTIQSKFNYGWGLIKSPSP 54


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 515,888,995
Number of Sequences: 1657284
Number of extensions: 8144055
Number of successful extensions: 11743
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11741
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69966202150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)