Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_B04
(898 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 134 6e-32
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 134 6e-32
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 117 1e-26
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 108 5e-24
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 103 2e-22
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 102 4e-22
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 77 2e-14
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 75 5e-14
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 75 5e-14
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 71 9e-13
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 66 3e-11
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 62 4e-10
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 62 5e-10
U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory... 31 1.1
Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical pr... 28 7.9
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 28 7.9
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 134 bits (325), Expect = 6e-32
Identities = 68/168 (40%), Positives = 97/168 (57%), Gaps = 1/168 (0%)
Frame = +2
Query: 359 VATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 538
V +LKL G +P I LGT P ++TA+ GYR ID A++Y N+K +G+A+K
Sbjct: 2 VQSLKLNSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKE 61
Query: 539 KIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGNS 718
+D+G V+R+ELFI K+W+TFH I L+DL L + DL LIH P EG
Sbjct: 62 ILDEGKVKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAE 121
Query: 719 SIPK-ISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIQK 859
P + ++YS+ DY++ W E G +SIG+SNF +QIQ+
Sbjct: 122 LFPAGENGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQR 169
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 134 bits (325), Expect = 6e-32
Identities = 68/168 (40%), Positives = 97/168 (57%), Gaps = 1/168 (0%)
Frame = +2
Query: 359 VATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 538
V +LKL G +P I LGT P ++TA+ GYR ID A++Y N+K +G+A+K
Sbjct: 2 VQSLKLNSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKE 61
Query: 539 KIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGNS 718
+D+G V+R+ELFI K+W+TFH I L+DL L + DL LIH P EG
Sbjct: 62 ILDEGKVKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAE 121
Query: 719 SIPK-ISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIQK 859
P + ++YS+ DY++ W E G +SIG+SNF +QIQ+
Sbjct: 122 LFPAGENGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQR 169
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 117 bits (282), Expect = 1e-26
Identities = 68/171 (39%), Positives = 96/171 (56%)
Frame = +2
Query: 362 ATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNK 541
A++KL +G MPVI LGT P V+TA+ GYR IDTA +Y NE+ IG AIK
Sbjct: 6 ASIKLSNGVEMPVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKEL 65
Query: 542 IDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGNSS 721
+++G V+R+ELFI K W+ +E R SL L LE+ DL+L H P + + S
Sbjct: 66 LEEGVVKREELFITTKAWTHELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSE 125
Query: 722 IPKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIQKNFGQG 874
I+S ++ D W + + GLAK++GVSN+N+ QI + G
Sbjct: 126 --HIASPVE-------DVWRQFDAVYKAGLAKAVGVSNWNNDQISRALALG 167
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 108 bits (260), Expect = 5e-24
Identities = 58/169 (34%), Positives = 90/169 (53%), Gaps = 3/169 (1%)
Frame = +2
Query: 359 VATLKLRDGTFMPVIALGTALLPPRLT-TEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 535
V ++ L G +P+ LGT + T + A+D GYR IDTA++Y NE +IGK +
Sbjct: 3 VDSIPLNTGAQLPLFGLGTWQVKDEAELTVALRAALDAGYRLIDTAHLYQNEHIIGKVLH 62
Query: 536 NKIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGN 715
I G ++R+++F+ KL T H + V L L LE+ DL+LIH P K
Sbjct: 63 EYISSGKLKREDIFVTSKLPFTAHAPEDVPKCVESQLKALQLEYIDLYLIHCPFPFKHQE 122
Query: 716 SSIPKI--SSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIQ 856
S + + + +E ++D W +E L +G K++GVSNF+ Q+Q
Sbjct: 123 GSFAPLMENGELAVTEIAHIDTWRALEKLYKEGKLKALGVSNFSCNQLQ 171
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 103 bits (247), Expect = 2e-22
Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 6/176 (3%)
Frame = +2
Query: 365 TLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKI 544
T+ L G MPVI GT LP L E V A++ GYR ID+A + N++ + IK+
Sbjct: 6 TVTLNSGYEMPVIGYGTWQLPKNLAAERVRDALEAGYRHIDSALSFKNQEEVAAGIKDWC 65
Query: 545 DDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKE----G 712
VRR+ELF+ K+W+T+H + L + DL +IH P E G
Sbjct: 66 KIRKVRREELFLSSKIWNTYHSRNRCMQQIDEMLEIFETTYMDLIVIHWPFGWAEDEPPG 125
Query: 713 NSSI-PK-ISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIQKNFGQG 874
+ P+ + ++YS+ DY++ W +ED G +SIG++NFN Q+++ + +G
Sbjct: 126 ERGLWPRGANGKMRYSDVDYLETWKALEDAHRSGKIRSIGLANFNIGQVEQVWTKG 181
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 102 bits (244), Expect = 4e-22
Identities = 62/166 (37%), Positives = 86/166 (51%)
Frame = +2
Query: 356 EVATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 535
+V L +G MP I LGT + ++ A+ GYR IDTA +Y NE IG A+
Sbjct: 4 KVPIFTLSNGVLMPSIGLGTWQMTGEEGKTVIRNAVLAGYRHIDTATLYQNEHQIGDALA 63
Query: 536 NKIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGN 715
+G ++R+++FI K + D+VE A R SL L L++ DL+L H P S K+
Sbjct: 64 ELFAEGILKREDIFITTKAFCHEVAPDVVEEALRNSLKRLRLDYVDLYLAHIPASTKDDG 123
Query: 716 SSIPKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQI 853
S S+ D W G E + GL K+IGVSNFN +QI
Sbjct: 124 SF---------RSDVKVEDIWRGFEKVYGLGLTKAIGVSNFNESQI 160
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 77.0 bits (181), Expect = 2e-14
Identities = 46/158 (29%), Positives = 85/158 (53%), Gaps = 2/158 (1%)
Frame = +2
Query: 392 MPVIALGT-ALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRD 568
MP+I +GT + + ++++ GYR IDTA +Y NE IG+ ++ + ++R+
Sbjct: 11 MPLIGIGTWQVQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLPANGLKRE 70
Query: 569 ELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNP-MSLKEGNSSIPKISSVI 745
+++I KL + + SL++L +E+ DL LIH P SLK N + K+
Sbjct: 71 DIWITSKLAPSNAGVKKARESIEESLSNLKVEYLDLLLIHWPGSSLKSENPANKKLR--- 127
Query: 746 QYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIQK 859
+++W M +++A+G +S+GVSNF +++
Sbjct: 128 -------VESWNVMCEMMAEGKLRSVGVSNFEICHLEE 158
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 75.4 bits (177), Expect = 5e-14
Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 3/172 (1%)
Frame = +2
Query: 371 KLRDGTFMPVIALGTALLPPRLTTEI-VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 547
K DG MP I LG + + + ++ +E A+ GYR DTA +Y NE +G ++K +
Sbjct: 13 KFSDGYEMPKIGLGISRIETQQDLDVSIEAALKSGYRQFDTANLYKNETFLGNSLKKYLP 72
Query: 548 DGTVRRDELFIMGKLWSTFHRTDLVETACRI--SLADLGLEFFDLFLIHNPMSLKEGNSS 721
+ R+++FI K+ T + + ET ++ SLA L ++ DL LIH P GN
Sbjct: 73 QFGLTREDVFITTKV-RTLNENTVEETEKQLANSLATLQTDYVDLLLIHYPRDRDTGNDD 131
Query: 722 IPKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIQKNFGQGK 877
+I+ + W +E G +SIGVSN+ + + F K
Sbjct: 132 DYEINKSRR------KIVWQTLEKAKESGRVRSIGVSNYEVYHLVEMFEYAK 177
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 75.4 bits (177), Expect = 5e-14
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 2/165 (1%)
Frame = +2
Query: 371 KLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDD 550
KL++G +P +ALGT V+ A+ +GYR+ DTA Y NEK +G A+K +
Sbjct: 3 KLKNGQEIPKLALGTYEAKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLGLALKTLLPR 62
Query: 551 GTVRRDELFIMGKL--WSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGNSSI 724
+ +++++ K+ +S+ + +L+ SL L ++ DL L+H P L
Sbjct: 63 HNICSEDIYLTSKVFPYSSKNAAELIRKDVNESLELLDRKYLDLVLVHYPRPL------- 115
Query: 725 PKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIQK 859
+ + ++ D W +E L A+G +SIGVSN+ I++
Sbjct: 116 -DTEDLNENNKMYRKDTWIALEKLHAEGKIRSIGVSNYEPHHIEE 159
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 71.3 bits (167), Expect = 9e-13
Identities = 48/175 (27%), Positives = 89/175 (50%)
Frame = +2
Query: 365 TLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKI 544
++KL G P+I LGT + +++ A+ GYR DTA +Y NEK IG A++ +
Sbjct: 2 SIKLNTGYDCPLIGLGTYKIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDALEILL 61
Query: 545 DDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGNSSI 724
++R+++FI K+ + + V+ SL+ L + D++LIH P S G+
Sbjct: 62 PKHNLKREDIFITTKMHP--NTVENVKKLVDESLSLLKTSYIDMYLIHYPKSFDYGDQD- 118
Query: 725 PKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIQKNFGQGKSSLP 889
++ ++ + ++ D W + G +S+GVS+F +++ GK+ P
Sbjct: 119 -PMNKTLRIATWN--DLW----ECKNAGKIRSVGVSSFEIRHLEELKDLGKNFPP 166
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 66.1 bits (154), Expect = 3e-11
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 4/167 (2%)
Frame = +2
Query: 371 KLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDD 550
KL G +P + GT + ++ A+ GYR DTA Y NEK +G+A+K +
Sbjct: 14 KLNSGYNIPFVGFGTYKVTGENVPPAIDAALTAGYRMFDTAKYYLNEKELGEALKILLPK 73
Query: 551 GTVRRDELFIMGKLWSTFHRTDLVETACR----ISLADLGLEFFDLFLIHNPMSLKEGNS 718
+ R ++F+ K F + ACR SL L ++ D++L+H P K +S
Sbjct: 74 HGLSRSDVFLTSKF---FPESKNCREACRGFVEESLQSLQTDYIDMYLVHYP---KPNDS 127
Query: 719 SIPKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIQK 859
+++ +Y + A+ +E+ A G +SIGVSN+ +++
Sbjct: 128 DNDDVNNA-EYRKI----AYEVLEEAKAAGKVRSIGVSNYEIVHLEE 169
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 62.5 bits (145), Expect = 4e-10
Identities = 50/161 (31%), Positives = 75/161 (46%)
Frame = +2
Query: 359 VATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 538
+ T L + MP+I LGT ++ + GYR IDTA YG EK +G A+KN
Sbjct: 2 IPTTVLSNNVEMPLIGLGTTHSGGYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAVKN 61
Query: 539 KIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGNS 718
+V R+E+F+ KLW D V A + S L ++ D+++IH
Sbjct: 62 ----CSVPREEMFLSTKLWPV-DCGDEVYNAFQTSCEKLQTDYLDMYMIH---------- 106
Query: 719 SIPKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFN 841
+P++ I + W ME L +SIGVSN++
Sbjct: 107 -MPQLPDWIVNQKETKEKTWRQMELLYEDEHVRSIGVSNYS 146
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 62.1 bits (144), Expect = 5e-10
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Frame = +2
Query: 260 GKQKRDTGDLTDEQYKTRIAE-LNEAKLKGSVKEVATLKLRDGTFMPVIALGTALLPPRL 436
G+ G+ +D+ + + L ++ LK S + + L L + MP + LGT
Sbjct: 12 GRSSNSDGNASDDGHPPALTPILLKSYLKNSDAK-SHLTLSNAHSMPAVGLGTWQSNAED 70
Query: 437 TTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTD 616
V+ A+ GY IDTA Y NE+ IG AIK I +G V+R++LFI K+ + F
Sbjct: 71 VISAVKAAVKNGYSLIDTASGYNNEEFIGTAIKEVIAEGVVKREDLFITTKVPNLFSSLR 130
Query: 617 LV 622
LV
Sbjct: 131 LV 132
>U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical
protein C56G3.2 protein.
Length = 131
Score = 48.4 bits (110), Expect = 7e-06
Identities = 31/88 (35%), Positives = 46/88 (52%)
Frame = +2
Query: 593 WSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGNSSIPKISSVIQYSEFDYMD 772
W+ +E A R SL L LE+ DL+L H P + + S KI S ++ D
Sbjct: 53 WTNELAPGRLEGALRDSLKKLHLEYVDLYLAHMPTAFSDDMSQ--KIESSVE-------D 103
Query: 773 AWFGMEDLVAKGLAKSIGVSNFNSTQIQ 856
W + + GLAK++GVSN+N+ QI+
Sbjct: 104 IWRQFDAVYKAGLAKAVGVSNWNNDQIR 131
>U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory
abnormality protein14 protein.
Length = 439
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +2
Query: 443 EIVETAIDMGYRAIDTAYIYG---NEKLIGKAI 532
+IVETAI G IDT Y Y +E ++GKA+
Sbjct: 118 KIVETAIKQGINYIDTGYWYSQSRSESILGKAL 150
>Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical
protein T28F4.4 protein.
Length = 717
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -1
Query: 613 GAMECTPQFTHNEKLVSPHGAVVNLVLDRFSYELFVAVNISGIYSSVAHINSSLHYFR 440
G QFT + + GA+ +VL + L +S +++++AH+ SS FR
Sbjct: 422 GDAHINSQFTKEDFVHRTKGAIAKIVLVKERIRLAKVPALSELFNALAHVMSSPENFR 479
>Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical
protein T07F10.1b protein.
Length = 976
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +2
Query: 536 NKIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLF 679
++I DG +R E F M LWS + T D +E D F
Sbjct: 419 DEISDGNMRMREWFTMDALWSALAADSVASTHPLTFKIDKAMEVLDSF 466
>Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical
protein T07F10.1a protein.
Length = 988
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +2
Query: 536 NKIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLF 679
++I DG +R E F M LWS + T D +E D F
Sbjct: 431 DEISDGNMRMREWFTMDALWSALAADSVASTHPLTFKIDKAMEVLDSF 478
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Frame = +1
Query: 712 QQFYTEDIISDPILGVRLHGRLVRHG------RPRSERLGQEHRGQQLQFDPDPEEFWTR 873
QQF E+ + P++ + R+ R +LG+ H+G QL D + E W R
Sbjct: 759 QQFQEEEHFNAPVIVRKQENLQQRYNALRDPLEKRKRKLGESHQGNQLFRDIEDELAWIR 818
Query: 874 Q 876
+
Sbjct: 819 E 819
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,784,858
Number of Sequences: 27780
Number of extensions: 428524
Number of successful extensions: 1542
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1527
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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