Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_B02
         (901 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            26   1.4  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.6  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 15/53 (28%), Positives = 25/53 (47%)
 Frame = -3

Query: 383  VLTTSFGCVWIKRALHSGSPSMTCPTWQDSWVENPPSSTTMCGASVFSLLGGV 225
            +  TS G  ++  A  +GS   +   W      N     ++ GAS+F+ +GGV
Sbjct: 2761 ITATSVGFAYVSIASANGSWDPSKWDWSQPGTWNALFIGSLTGASLFNAVGGV 2813


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +1

Query: 340  SARFIHTHPNEVVNTHLDFLRA-GADLIITNTYQASVEGFVEHLGVTKEQG 489
            ++ FI T+PN+++NT        G  L +T T   ++  F    G  K  G
Sbjct: 2843 TSAFIVTNPNQLINTFRSITTTLGRALFVTATVAITIT-FAYLFGALKMGG 2892


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 922,233
Number of Sequences: 2352
Number of extensions: 19834
Number of successful extensions: 89
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 89
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97160985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)