Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_A24
         (923 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0143 - 944169-947273                                             30   2.3  
02_01_0252 - 1657268-1657692,1657727-1658445,1658761-1659089,165...    28   9.1  

>05_01_0143 - 944169-947273
          Length = 1034

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +1

Query: 127 KIRIDLTEEDEICLKINEKGPNNKMTELETRQDELLNKLEILYERIKTISS 279
           K ++ LTE   I    N K    K+TE+ET+  E LN++  +   +++ +S
Sbjct: 647 KEKVLLTEYTSILR--NYKNEKRKLTEVETKNQERLNEMSAMISELRSANS 695


>02_01_0252 -
           1657268-1657692,1657727-1658445,1658761-1659089,
           1659223-1659375,1659430-1659561,1659748-1659852,
           1660020-1660193,1660283-1660352,1660458-1660639,
           1660738-1660847,1660948-1661052,1661153-1661231,
           1662128-1662168,1662283-1662358,1662455-1662589
          Length = 944

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 160 ICLKINEKGPNNKMTELETRQDELLNKL 243
           ICL + E+GP+   T L+T+  E  N++
Sbjct: 774 ICLGLWERGPSRIKTSLQTKMGETANRM 801


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,314,294
Number of Sequences: 37544
Number of extensions: 283244
Number of successful extensions: 528
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)