Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_A24
         (923 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical ...    31   1.5  
AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage...    31   1.5  
U64604-1|AAF98623.1|  243|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr...    28   8.2  
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p...    28   8.2  
AC024817-53|AAP13744.1|  549|Caenorhabditis elegans Hypothetical...    28   8.2  
AC024817-52|AAF59568.4|  611|Caenorhabditis elegans Hypothetical...    28   8.2  

>AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical
           protein Y39A1B.3 protein.
          Length = 1499

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
 Frame = +1

Query: 121 TLKIRIDLTEEDEICLKINE-KGPNNKMTELETRQDELLNKLEILYE--RIKTISSQCKL 291
           T K+++   ++D++     E +  NN++ +L  +  +L+NK+ I  E  R  TI+ +C L
Sbjct: 650 TFKVQLTQMDDDQLLENEQEARDRNNQIMQLRAQVQQLINKMSIEQELSRCVTIALRCVL 709

Query: 292 D 294
           +
Sbjct: 710 N 710


>AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage
           compensation protein protein.
          Length = 1455

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
 Frame = +1

Query: 121 TLKIRIDLTEEDEICLKINE-KGPNNKMTELETRQDELLNKLEILYE--RIKTISSQCKL 291
           T K+++   ++D++     E +  NN++ +L  +  +L+NK+ I  E  R  TI+ +C L
Sbjct: 606 TFKVQLTQMDDDQLLENEQEARDRNNQIMQLRAQVQQLINKMSIEQELSRCVTIALRCVL 665

Query: 292 D 294
           +
Sbjct: 666 N 666


>U64604-1|AAF98623.1|  243|Caenorhabditis elegans Hypothetical
           protein F49E7.2 protein.
          Length = 243

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +1

Query: 115 CTTLKIRIDLTEEDEICLKINEKGPNNKMTELETRQDELL 234
           CTTLK   DL  + E    ++ K P+    ELET +DE L
Sbjct: 179 CTTLKTSRDLRLKSESPNWLSVKSPSRAPVELETFRDEQL 218


>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical
           protein C47E8.8 protein.
          Length = 1675

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
 Frame = +1

Query: 133 RIDLTEED---EICLKINEKGPNNKMT-ELETRQDELLNKLEILYERIK 267
           R D+TEED   ++    +   P  + + ELETRQ E + KL+ L   IK
Sbjct: 641 RWDVTEEDLKRKLSATSSTHNPRERASVELETRQSEEIQKLQRLVNVIK 689


>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
           protein C47E8.8 protein.
          Length = 1675

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
 Frame = +1

Query: 133 RIDLTEED---EICLKINEKGPNNKMT-ELETRQDELLNKLEILYERIK 267
           R D+TEED   ++    +   P  + + ELETRQ E + KL+ L   IK
Sbjct: 641 RWDVTEEDLKRKLSATSSTHNPRERASVELETRQSEEIQKLQRLVNVIK 689


>AC024817-53|AAP13744.1|  549|Caenorhabditis elegans Hypothetical
           protein Y54G2A.26b protein.
          Length = 549

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 13/53 (24%), Positives = 29/53 (54%)
 Frame = +1

Query: 121 TLKIRIDLTEEDEICLKINEKGPNNKMTELETRQDELLNKLEILYERIKTISS 279
           T++  ID+  ++E+  +  +K   N        ++ELL+KL  ++E  K++ +
Sbjct: 230 TVRKCIDMAVDEEVFTRCTDKNLVNLTPSERAEREELLSKLSTVFEDEKSLGA 282


>AC024817-52|AAF59568.4|  611|Caenorhabditis elegans Hypothetical
           protein Y54G2A.26a protein.
          Length = 611

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 13/53 (24%), Positives = 29/53 (54%)
 Frame = +1

Query: 121 TLKIRIDLTEEDEICLKINEKGPNNKMTELETRQDELLNKLEILYERIKTISS 279
           T++  ID+  ++E+  +  +K   N        ++ELL+KL  ++E  K++ +
Sbjct: 292 TVRKCIDMAVDEEVFTRCTDKNLVNLTPSERAEREELLSKLSTVFEDEKSLGA 344


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,412,194
Number of Sequences: 27780
Number of extensions: 272955
Number of successful extensions: 623
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)