Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_A19
         (899 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase w...    33   1.1  
X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2 pr...    33   1.1  
AK092711-1|BAC03955.1|  149|Homo sapiens protein ( Homo sapiens ...    31   5.7  
D88812-1|BAB46921.1|  729|Homo sapiens cerebral protein-6 protein.     31   7.5  
D87462-1|BAA13401.2|  759|Homo sapiens KIAA0272 protein.               31   7.5  
BC001596-1|AAH01596.1|  729|Homo sapiens BRCA1 associated protei...    31   7.5  
AY130008-1|AAN05092.1|  566|Homo sapiens MU-MB-17.261 protein.         31   7.5  
AF045581-1|AAC15970.1|  729|Homo sapiens BRCA1 associated protei...    31   7.5  

>Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase with
           SH3 domain, leucine zipper domain and proline rich
           protein.
          Length = 953

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 21/68 (30%), Positives = 34/68 (50%)
 Frame = -3

Query: 702 ERRTGIR*AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPAT 523
           ER  G+    GS+Q S+     G++P    +  GFA+ +   +F +A  GG +   +P +
Sbjct: 573 ERLKGL--GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYS 630

Query: 522 RPFYGSWP 499
            P Y S P
Sbjct: 631 TPSYLSVP 638


>X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2
           protein.
          Length = 954

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 21/68 (30%), Positives = 34/68 (50%)
 Frame = -3

Query: 702 ERRTGIR*AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPAT 523
           ER  G+    GS+Q S+     G++P    +  GFA+ +   +F +A  GG +   +P +
Sbjct: 574 ERLKGL--GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYS 631

Query: 522 RPFYGSWP 499
            P Y S P
Sbjct: 632 TPSYLSVP 639


>AK092711-1|BAC03955.1|  149|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35392 fis, clone SKNSH2000716. ).
          Length = 149

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 20/39 (51%), Positives = 20/39 (51%)
 Frame = -3

Query: 561 RQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPPDSV 445
           RQ  G  G   A R F  S P  GLL  CS LR  PDSV
Sbjct: 69  RQHFGIPGYPEAARDFSSS-PAPGLLTLCSRLRAKPDSV 106


>D88812-1|BAB46921.1|  729|Homo sapiens cerebral protein-6 protein.
          Length = 729

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 20/48 (41%), Positives = 24/48 (50%)
 Frame = +3

Query: 633 PPGSSLVRSPVPXLPLTGYLXAFLPSGXVALSHSSRCXYLSSGVGRSR 776
           PPGSSL        P+   L AFL +   A S       L++GVGRSR
Sbjct: 338 PPGSSLNGVHPNPTPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSR 385


>D87462-1|BAA13401.2|  759|Homo sapiens KIAA0272 protein.
          Length = 759

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 20/48 (41%), Positives = 24/48 (50%)
 Frame = +3

Query: 633 PPGSSLVRSPVPXLPLTGYLXAFLPSGXVALSHSSRCXYLSSGVGRSR 776
           PPGSSL        P+   L AFL +   A S       L++GVGRSR
Sbjct: 368 PPGSSLNGVHPNPTPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSR 415


>BC001596-1|AAH01596.1|  729|Homo sapiens BRCA1 associated protein-1
           (ubiquitin carboxy-terminal hydrolase) protein.
          Length = 729

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 20/48 (41%), Positives = 24/48 (50%)
 Frame = +3

Query: 633 PPGSSLVRSPVPXLPLTGYLXAFLPSGXVALSHSSRCXYLSSGVGRSR 776
           PPGSSL        P+   L AFL +   A S       L++GVGRSR
Sbjct: 338 PPGSSLNGVHPNPTPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSR 385


>AY130008-1|AAN05092.1|  566|Homo sapiens MU-MB-17.261 protein.
          Length = 566

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 20/48 (41%), Positives = 24/48 (50%)
 Frame = +3

Query: 633 PPGSSLVRSPVPXLPLTGYLXAFLPSGXVALSHSSRCXYLSSGVGRSR 776
           PPGSSL        P+   L AFL +   A S       L++GVGRSR
Sbjct: 175 PPGSSLNGVHPNPTPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSR 222


>AF045581-1|AAC15970.1|  729|Homo sapiens BRCA1 associated protein 1
           protein.
          Length = 729

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 20/48 (41%), Positives = 24/48 (50%)
 Frame = +3

Query: 633 PPGSSLVRSPVPXLPLTGYLXAFLPSGXVALSHSSRCXYLSSGVGRSR 776
           PPGSSL        P+   L AFL +   A S       L++GVGRSR
Sbjct: 338 PPGSSLNGVHPNPTPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSR 385


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,150,701
Number of Sequences: 237096
Number of extensions: 2698583
Number of successful extensions: 7270
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7268
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)