Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_A15
         (898 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    27   0.31 
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    27   0.31 
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    27   0.31 
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    27   0.31 
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    27   0.31 
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   5.0  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   6.6  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   8.7  

>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 26.6 bits (56), Expect = 0.31
 Identities = 15/64 (23%), Positives = 33/64 (51%)
 Frame = +2

Query: 392 KILNRTRHISPEPSRSLNKIKETRHTTVERIKPPPDLLSGHMKRIKLENVTTKCSHMNSN 571
           K  +R+R    +  ++ N  ++ R T+ ER +   +       +I + +++ K  H N+N
Sbjct: 37  KRYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKI-ISSLSNKTIHNNNN 95

Query: 572 NHKR 583
           N+K+
Sbjct: 96  NYKK 99


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 26.6 bits (56), Expect = 0.31
 Identities = 15/64 (23%), Positives = 33/64 (51%)
 Frame = +2

Query: 392 KILNRTRHISPEPSRSLNKIKETRHTTVERIKPPPDLLSGHMKRIKLENVTTKCSHMNSN 571
           K  +R+R    +  ++ N  ++ R T+ ER +   +       +I + +++ K  H N+N
Sbjct: 37  KRYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKI-ISSLSNKTIHNNNN 95

Query: 572 NHKR 583
           N+K+
Sbjct: 96  NYKK 99


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 26.6 bits (56), Expect = 0.31
 Identities = 15/64 (23%), Positives = 33/64 (51%)
 Frame = +2

Query: 392 KILNRTRHISPEPSRSLNKIKETRHTTVERIKPPPDLLSGHMKRIKLENVTTKCSHMNSN 571
           K  +R+R    +  ++ N  ++ R T+ ER +   +       +I + +++ K  H N+N
Sbjct: 37  KRYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKI-ISSLSNKTIHNNNN 95

Query: 572 NHKR 583
           N+K+
Sbjct: 96  NYKK 99


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 26.6 bits (56), Expect = 0.31
 Identities = 15/64 (23%), Positives = 33/64 (51%)
 Frame = +2

Query: 392 KILNRTRHISPEPSRSLNKIKETRHTTVERIKPPPDLLSGHMKRIKLENVTTKCSHMNSN 571
           K  +R+R    +  ++ N  ++ R T+ ER +   +       +I + +++ K  H N+N
Sbjct: 37  KRYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKI-ISSLSNKTIHNNNN 95

Query: 572 NHKR 583
           N+K+
Sbjct: 96  NYKK 99


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 26.6 bits (56), Expect = 0.31
 Identities = 15/64 (23%), Positives = 33/64 (51%)
 Frame = +2

Query: 392 KILNRTRHISPEPSRSLNKIKETRHTTVERIKPPPDLLSGHMKRIKLENVTTKCSHMNSN 571
           K  +R+R    +  ++ N  ++ R T+ ER +   +       +I + +++ K  H N+N
Sbjct: 270 KRYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKI-ISSLSNKTIHNNNN 328

Query: 572 NHKR 583
           N+K+
Sbjct: 329 NYKK 332


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 318 MTYWTYFINTAFRTDKEN 371
           +TYW +    +F TDK N
Sbjct: 77  LTYWAFGFAMSFGTDKLN 94


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 322 VISQHFFYPINSQMSLFY 269
           V+ Q+FFY I + +  FY
Sbjct: 195 VVCQNFFYQIYATLGSFY 212


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 6/26 (23%), Positives = 16/26 (61%)
 Frame = -1

Query: 226 KHFVRNSHCFSDVKEEDLITCNIETE 149
           K  +RN+HC ++ + +++   N + +
Sbjct: 406 KELIRNTHCVNNNQNDNIQNTNNQND 431


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,730
Number of Sequences: 438
Number of extensions: 4429
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)