Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_A13
         (905 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_1025 - 22391267-22391767,22392641-22392736,22392838-223931...    34   0.18 
02_04_0460 - 23118221-23118406,23118417-23118671,23118763-231188...    33   0.31 
07_03_1180 - 24601631-24602142,24602518-24602581,24602811-246028...    31   1.7  
11_01_0532 + 4201374-4201401,4201475-4202652,4204316-4204670,420...    30   2.9  
04_04_0666 + 27086568-27086975,27087073-27087477,27088542-270886...    29   3.8  
02_04_0116 + 19901546-19901737,19901825-19901899,19902034-199021...    28   8.9  
01_07_0118 + 41176159-41178909                                         28   8.9  

>10_08_1025 -
           22391267-22391767,22392641-22392736,22392838-22393106,
           22393257-22393431,22393503-22393718,22393819-22393926,
           22394020-22394544,22394631-22394819,22394924-22395041,
           22395172-22395437,22395521-22395658
          Length = 866

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +1

Query: 487 SSTSEISMNVNQTVDSTTP-SSTEKSNXVYEIGPSNSSILAVVQVNASAATPSASVNPSD 663
           SST+  + N N    ST P +S+  +N   E+ P N  +L V     ++A PSA +N S 
Sbjct: 773 SSTTTTTGNGNGETSSTPPRNSSSNNNNADELLPPNGCLLTVGMQVLASAVPSAKLNLSS 832

Query: 664 AAPL 675
              +
Sbjct: 833 VTAI 836


>02_04_0460 -
           23118221-23118406,23118417-23118671,23118763-23118851,
           23119527-23119605,23121317-23121484,23121760-23122137
          Length = 384

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +2

Query: 617 LMLRLRHPVPLLIHQTLLLFQKKAELKMNIIAQWRYFS 730
           LM+ +R P P ++H T+L   +K  L+++ +  W  +S
Sbjct: 290 LMIMIRMPSPTILHTTMLAMIRKCHLQLSSLPCWNVYS 327


>07_03_1180 -
           24601631-24602142,24602518-24602581,24602811-24602876,
           24602949-24603070,24603170-24603344,24603466-24603701,
           24603781-24604129,24605009-24605146,24605242-24605289
          Length = 569

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +1

Query: 487 SSTSEISMNVNQTVDSTTPSSTEKSNXVYEIGPSNSSILAVVQVNA-SAATPSASVNPSD 663
           +S  E S NVN+T D   PS+   ++ V  +  ++SS    V V A +    S + N   
Sbjct: 175 TSEPETSGNVNETADLELPSAENVNDNVENLPANDSSPEENVLVEACTEVVSSCAENIPA 234

Query: 664 AAPLP 678
           AAP P
Sbjct: 235 AAPAP 239


>11_01_0532 +
           4201374-4201401,4201475-4202652,4204316-4204670,
           4204791-4204864,4206965-4207056,4207500-4207573,
           4207680-4207822,4207889-4207909
          Length = 654

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 21/62 (33%), Positives = 28/62 (45%)
 Frame = +1

Query: 517 NQTVDSTTPSSTEKSNXVYEIGPSNSSILAVVQVNASAATPSASVNPSDAAPLPEKS*AE 696
           + T DS       K N      PSN S  A    + S  + SA+VN  D + +PE   A+
Sbjct: 6   SSTSDSRLKWRKWKRNPTASPSPSNRSSAAAAAADHSDDSDSAAVNEDDDSAVPED--AD 63

Query: 697 DE 702
           DE
Sbjct: 64  DE 65


>04_04_0666 +
           27086568-27086975,27087073-27087477,27088542-27088635,
           27088731-27088768,27088853-27088999,27089167-27089266,
           27090001-27090953,27091512-27091569,27092904-27093022
          Length = 773

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +1

Query: 391 KNSESKNSILVDKSN-NYYEILSRXKRLSERNLSSTSEISMN 513
           KN+E KN ++ +KSN + YEI S      ++N  +  +IS N
Sbjct: 66  KNNEQKNDVVDEKSNFSGYEIYSGKLFFDKKNRITGDQISAN 107


>02_04_0116 +
           19901546-19901737,19901825-19901899,19902034-19902115,
           19902219-19902298,19903279-19903482,19903625-19903750,
           19903872-19903985,19904802-19904918
          Length = 329

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/42 (28%), Positives = 25/42 (59%)
 Frame = -3

Query: 435 IALVHKN*IFTFTVFVWSXLFQHLQPQRHLITLLFLHTNTFF 310
           I L+ K   F  ++F+   L+ H+  +RHL+ L+ +H + ++
Sbjct: 162 IPLIQKTFHFC-SIFITIQLWGHIYHKRHLLNLMLIHYSKYY 202


>01_07_0118 + 41176159-41178909
          Length = 916

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -2

Query: 433 CSCPQELNF--YFHCFCLEYXVSTLATTEALNNVIIPAHQYI 314
           C CPQ+LNF    H F L+Y    L    A N++I   H YI
Sbjct: 480 CFCPQDLNFGKSVHSFILKY--GFLTGVSAANSLI---HMYI 516


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,366,854
Number of Sequences: 37544
Number of extensions: 321620
Number of successful extensions: 870
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)