Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_A13
(905 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC112213-1|AAI12214.1| 581|Homo sapiens Na+/H+ exchanger isofor... 46 2e-04
AL162615-3|CAI18970.1| 581|Homo sapiens solute carrier family 9... 46 2e-04
AL031685-3|CAI23460.1| 581|Homo sapiens solute carrier family 9... 46 2e-04
AB023156-1|BAA76783.2| 595|Homo sapiens KIAA0939 protein protein. 46 2e-04
BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein. 37 0.088
AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens ... 37 0.088
AF137396-9|AAG41683.1| 312|Homo sapiens HOR5'Beta5 protein. 32 2.5
>BC112213-1|AAI12214.1| 581|Homo sapiens Na+/H+ exchanger isoform 8
protein.
Length = 581
Score = 45.6 bits (103), Expect = 2e-04
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +1
Query: 694 EDEHNSSMAIFFVLCILGLRYTVNTF*CSNRIXLSPESVVIVFLGALIGMIINLMSIKNI 873
++E +S M IFF L +L + + R+ PESV +V LG L+G +I ++ K +
Sbjct: 53 QEEQSSGMTIFFSLLVLAICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKIIEFKKL 112
Query: 874 AN 879
AN
Sbjct: 113 AN 114
>AL162615-3|CAI18970.1| 581|Homo sapiens solute carrier family 9
(sodium/hydrogen exchanger), member 8 protein.
Length = 581
Score = 45.6 bits (103), Expect = 2e-04
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +1
Query: 694 EDEHNSSMAIFFVLCILGLRYTVNTF*CSNRIXLSPESVVIVFLGALIGMIINLMSIKNI 873
++E +S M IFF L +L + + R+ PESV +V LG L+G +I ++ K +
Sbjct: 53 QEEQSSGMTIFFSLLVLAICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKIIEFKKL 112
Query: 874 AN 879
AN
Sbjct: 113 AN 114
>AL031685-3|CAI23460.1| 581|Homo sapiens solute carrier family 9
(sodium/hydrogen exchanger), member 8 protein.
Length = 581
Score = 45.6 bits (103), Expect = 2e-04
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +1
Query: 694 EDEHNSSMAIFFVLCILGLRYTVNTF*CSNRIXLSPESVVIVFLGALIGMIINLMSIKNI 873
++E +S M IFF L +L + + R+ PESV +V LG L+G +I ++ K +
Sbjct: 53 QEEQSSGMTIFFSLLVLAICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKIIEFKKL 112
Query: 874 AN 879
AN
Sbjct: 113 AN 114
>AB023156-1|BAA76783.2| 595|Homo sapiens KIAA0939 protein protein.
Length = 595
Score = 45.6 bits (103), Expect = 2e-04
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +1
Query: 694 EDEHNSSMAIFFVLCILGLRYTVNTF*CSNRIXLSPESVVIVFLGALIGMIINLMSIKNI 873
++E +S M IFF L +L + + R+ PESV +V LG L+G +I ++ K +
Sbjct: 67 QEEQSSGMTIFFSLLVLAICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKIIEFKKL 126
Query: 874 AN 879
AN
Sbjct: 127 AN 128
>BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein.
Length = 257
Score = 37.1 bits (82), Expect = 0.088
Identities = 22/76 (28%), Positives = 42/76 (55%)
Frame = +1
Query: 487 SSTSEISMNVNQTVDSTTPSSTEKSNXVYEIGPSNSSILAVVQVNASAATPSASVNPSDA 666
SS+S S + + + S++PSS+ S+ PS+SS + ++S+++PS+S + S +
Sbjct: 85 SSSSTSSPSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSS 144
Query: 667 APLPEKS*AEDEHNSS 714
+P S +SS
Sbjct: 145 SPSSSSSSPSSSSSSS 160
Score = 32.3 bits (70), Expect = 2.5
Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +1
Query: 454 SRXKRLSERNLSSTSEISMNV-NQTVDSTTPSSTEKSNXVYEIGPSNSSILAVVQVNASA 630
SR S R++ S+S +S ++ + + S++PSS+ S+ PS+S + ++S
Sbjct: 35 SRSSSSSSRSILSSSILSSSIPSSSSSSSSPSSSHSSS-----SPSSSHSSSSPSSSSST 89
Query: 631 ATPSASVNPSDAAPLPEKS*AEDEHNS 711
++PS+S + S ++P S + +S
Sbjct: 90 SSPSSSSSSSSSSPSSSNSSSSSSSSS 116
Score = 31.1 bits (67), Expect = 5.7
Identities = 26/111 (23%), Positives = 52/111 (46%)
Frame = +1
Query: 382 TPNKNSESKNSILVDKSNNYYEILSRXKRLSERNLSSTSEISMNVNQTVDSTTPSSTEKS 561
+P+ + S + S++ S S + SS+S S N + + S++PSS+ S
Sbjct: 64 SPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSS 123
Query: 562 NXVYEIGPSNSSILAVVQVNASAATPSASVNPSDAAPLPEKS*AEDEHNSS 714
+ PS+SS ++S+++PS+S + ++ S + +SS
Sbjct: 124 S---SSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSS 171
Score = 30.7 bits (66), Expect = 7.6
Identities = 23/97 (23%), Positives = 49/97 (50%)
Frame = +1
Query: 382 TPNKNSESKNSILVDKSNNYYEILSRXKRLSERNLSSTSEISMNVNQTVDSTTPSSTEKS 561
+P+ +S S +S S++ S S + SS+S S + + + ++PSS+ S
Sbjct: 127 SPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSS-SPSSSGSSPSSSNSS 185
Query: 562 NXVYEIGPSNSSILAVVQVNASAATPSASVNPSDAAP 672
PS+SS + ++ +++ S++ +PS ++P
Sbjct: 186 PSSSSSSPSSSSSSPSPRSSSPSSSSSSTSSPSTSSP 222
>AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ35107 fis, clone PLACE6006871, moderately
similar to SUPPRESSOR PROTEIN SRP40. ).
Length = 258
Score = 37.1 bits (82), Expect = 0.088
Identities = 29/106 (27%), Positives = 52/106 (49%)
Frame = +1
Query: 397 SESKNSILVDKSNNYYEILSRXKRLSERNLSSTSEISMNVNQTVDSTTPSSTEKSNXVYE 576
S S +S S++ S S + SSTS S + + + S++PSS+ S+
Sbjct: 57 SSSSSSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSS-SSSSPSSSNSSSSSSS 115
Query: 577 IGPSNSSILAVVQVNASAATPSASVNPSDAAPLPEKS*AEDEHNSS 714
PS+SS + ++S+++PS+S + S ++P S +SS
Sbjct: 116 SSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSS 161
Score = 31.1 bits (67), Expect = 5.7
Identities = 26/109 (23%), Positives = 51/109 (46%)
Frame = +1
Query: 388 NKNSESKNSILVDKSNNYYEILSRXKRLSERNLSSTSEISMNVNQTVDSTTPSSTEKSNX 567
+ +S S S S++ S S + S+S S + + + S++PSS+ S+
Sbjct: 85 SSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSS 144
Query: 568 VYEIGPSNSSILAVVQVNASAATPSASVNPSDAAPLPEKS*AEDEHNSS 714
S+S + ++S+++PS+S +PS + P S + +SS
Sbjct: 145 SSPSSSSSSPSSSSSSSSSSSSSPSSS-SPSSSGSSPSSSNSSPSSSSS 192
Score = 30.7 bits (66), Expect = 7.6
Identities = 23/97 (23%), Positives = 49/97 (50%)
Frame = +1
Query: 382 TPNKNSESKNSILVDKSNNYYEILSRXKRLSERNLSSTSEISMNVNQTVDSTTPSSTEKS 561
+P+ +S S +S S++ S S + SS+S S + + + ++PSS+ S
Sbjct: 128 SPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSS-SPSSSGSSPSSSNSS 186
Query: 562 NXVYEIGPSNSSILAVVQVNASAATPSASVNPSDAAP 672
PS+SS + ++ +++ S++ +PS ++P
Sbjct: 187 PSSSSSSPSSSSSSPSPRSSSPSSSSSSTSSPSTSSP 223
>AF137396-9|AAG41683.1| 312|Homo sapiens HOR5'Beta5 protein.
Length = 312
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -2
Query: 400 HCFCLEYXVSTLATTEALNNVIIPAHQYIF-FVMNNMIYGISFSMKIKALFAL 245
H FCL V LA + N + PA +F FV++ +I IS+ + +K + ++
Sbjct: 174 HAFCLHQDVIKLACADTTFNRLYPAVLVVFIFVLDYLIIFISYVLILKTVLSI 226
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,911,130
Number of Sequences: 237096
Number of extensions: 2071838
Number of successful extensions: 3945
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3939
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -