Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_A12
(905 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U07652-1|AAA20518.1| 390|Drosophila melanogaster La/SS-B protein. 33 0.71
L32988-1|AAA21776.1| 390|Drosophila melanogaster La ribonucleop... 33 0.71
AY075257-1|AAL68124.1| 390|Drosophila melanogaster AT22034p pro... 33 0.71
AE014134-3230|AAN11073.1| 390|Drosophila melanogaster CG10922-P... 33 0.71
AE014134-3229|AAF53885.1| 390|Drosophila melanogaster CG10922-P... 33 0.71
BT029916-1|ABM92790.1| 295|Drosophila melanogaster FI01121p pro... 30 3.8
AY119274-1|AAM51134.1| 295|Drosophila melanogaster SD25936p pro... 30 3.8
AE014298-3071|AAF50867.2| 295|Drosophila melanogaster CG1529-PA... 30 3.8
AE014297-4641|AAN14249.1| 659|Drosophila melanogaster CG31019-P... 29 6.6
U31961-5|AAA84404.1| 424|Drosophila melanogaster protein ( Dros... 29 8.8
AE014297-2268|AAF55361.3| 417|Drosophila melanogaster CG10349-P... 29 8.8
>U07652-1|AAA20518.1| 390|Drosophila melanogaster La/SS-B protein.
Length = 390
Score = 32.7 bits (71), Expect = 0.71
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 738 ELMRKRHDSRREKGGQVSGKRQGRNRRAHEGASRGK 631
E M+KR D R KG + + KR G N H G + +
Sbjct: 353 EFMKKRRDFTRNKGKRFNRKRHGGNDHKHGGGKKAR 388
>L32988-1|AAA21776.1| 390|Drosophila melanogaster La
ribonucleoprotein protein.
Length = 390
Score = 32.7 bits (71), Expect = 0.71
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 738 ELMRKRHDSRREKGGQVSGKRQGRNRRAHEGASRGK 631
E M+KR D R KG + + KR G N H G + +
Sbjct: 353 EFMKKRRDFTRNKGKRFNRKRHGGNDHKHGGGKKAR 388
>AY075257-1|AAL68124.1| 390|Drosophila melanogaster AT22034p
protein.
Length = 390
Score = 32.7 bits (71), Expect = 0.71
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 738 ELMRKRHDSRREKGGQVSGKRQGRNRRAHEGASRGK 631
E M+KR D R KG + + KR G N H G + +
Sbjct: 353 EFMKKRRDFTRNKGKRFNRKRHGGNDHKHGGGKKAR 388
>AE014134-3230|AAN11073.1| 390|Drosophila melanogaster CG10922-PB,
isoform B protein.
Length = 390
Score = 32.7 bits (71), Expect = 0.71
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 738 ELMRKRHDSRREKGGQVSGKRQGRNRRAHEGASRGK 631
E M+KR D R KG + + KR G N H G + +
Sbjct: 353 EFMKKRRDFTRNKGKRFNRKRHGGNDHKHGGGKKAR 388
>AE014134-3229|AAF53885.1| 390|Drosophila melanogaster CG10922-PA,
isoform A protein.
Length = 390
Score = 32.7 bits (71), Expect = 0.71
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 738 ELMRKRHDSRREKGGQVSGKRQGRNRRAHEGASRGK 631
E M+KR D R KG + + KR G N H G + +
Sbjct: 353 EFMKKRRDFTRNKGKRFNRKRHGGNDHKHGGGKKAR 388
>BT029916-1|ABM92790.1| 295|Drosophila melanogaster FI01121p
protein.
Length = 295
Score = 30.3 bits (65), Expect = 3.8
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -3
Query: 795 CTQPSLERTTYTELRYLQRELMRKRHDSRREKGGQVSGKRQGRNRRAHEGASRGKR 628
C +P + R T EL +L+R RK H RRE + + Q +R +GA ++
Sbjct: 146 CQKPCVSRQTL-EL-HLRRHRARKTHRKRREHSRESQEQEQEHDRDQEQGAREAQQ 199
>AY119274-1|AAM51134.1| 295|Drosophila melanogaster SD25936p
protein.
Length = 295
Score = 30.3 bits (65), Expect = 3.8
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -3
Query: 795 CTQPSLERTTYTELRYLQRELMRKRHDSRREKGGQVSGKRQGRNRRAHEGASRGKR 628
C +P + R T EL +L+R RK H RRE + + Q +R +GA ++
Sbjct: 146 CQKPCVSRQTL-EL-HLRRHRARKTHRKRREHSRESQEQEQEHDRDQEQGAREAQQ 199
>AE014298-3071|AAF50867.2| 295|Drosophila melanogaster CG1529-PA
protein.
Length = 295
Score = 30.3 bits (65), Expect = 3.8
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -3
Query: 795 CTQPSLERTTYTELRYLQRELMRKRHDSRREKGGQVSGKRQGRNRRAHEGASRGKR 628
C +P + R T EL +L+R RK H RRE + + Q +R +GA ++
Sbjct: 146 CQKPCVSRQTL-EL-HLRRHRARKTHRKRREHSRESQEQEQEHDRDQEQGAREAQQ 199
>AE014297-4641|AAN14249.1| 659|Drosophila melanogaster CG31019-PA
protein.
Length = 659
Score = 29.5 bits (63), Expect = 6.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 693 QVSGKRQGRNRRAHEGASRGK 631
+V KR+GRNR AH SR K
Sbjct: 491 EVRSKRRGRNRHAHHSRSRSK 511
>U31961-5|AAA84404.1| 424|Drosophila melanogaster protein (
Drosophila melanogasterbithorax complex (BX-C), complete
sequence. ).
Length = 424
Score = 29.1 bits (62), Expect = 8.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 311 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 406
ES +VC G LP+P L C + GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371
>AE014297-2268|AAF55361.3| 417|Drosophila melanogaster CG10349-PA
protein.
Length = 417
Score = 29.1 bits (62), Expect = 8.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 311 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 406
ES +VC G LP+P L C + GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,787,519
Number of Sequences: 53049
Number of extensions: 816456
Number of successful extensions: 2360
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2358
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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