Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_A12
         (905 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10990-8|AAB59173.2|  223|Caenorhabditis elegans Hypothetical pr...    31   0.86 
Z92803-13|CAB07249.2|  331|Caenorhabditis elegans Hypothetical p...    30   2.0  
AL021482-4|CAA16341.2|  331|Caenorhabditis elegans Hypothetical ...    30   2.0  

>L10990-8|AAB59173.2|  223|Caenorhabditis elegans Hypothetical
           protein C30A5.3 protein.
          Length = 223

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +2

Query: 614 YKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLRESWRFLISS 739
           Y+  R+F +E    ALL +   +P+TC   +  E W FL ++
Sbjct: 71  YEHLRQFCIELNGLALLLQRECIPETCQQMTATEQWIFLCAA 112


>Z92803-13|CAB07249.2|  331|Caenorhabditis elegans Hypothetical
           protein K01G5.9 protein.
          Length = 331

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 18/51 (35%), Positives = 21/51 (41%)
 Frame = +2

Query: 701 FSLRESWRFLISSRCRYLSSVXVVRSKLGCVHEPPVQPDRCALSGNYRLES 853
           F  R S  FLI   CRYL +    R     V E    PD+C       +ES
Sbjct: 278 FKDRMSLEFLIFHNCRYLPAAVRCRDNQIRVFESQFDPDQCTTDPKCVIES 328


>AL021482-4|CAA16341.2|  331|Caenorhabditis elegans Hypothetical
           protein K01G5.9 protein.
          Length = 331

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 18/51 (35%), Positives = 21/51 (41%)
 Frame = +2

Query: 701 FSLRESWRFLISSRCRYLSSVXVVRSKLGCVHEPPVQPDRCALSGNYRLES 853
           F  R S  FLI   CRYL +    R     V E    PD+C       +ES
Sbjct: 278 FKDRMSLEFLIFHNCRYLPAAVRCRDNQIRVFESQFDPDQCTTDPKCVIES 328


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,617,441
Number of Sequences: 27780
Number of extensions: 391112
Number of successful extensions: 1092
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)