Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_A11
(915 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 89 8e-19
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 86 6e-18
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 71 2e-13
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 60 6e-10
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 56 5e-09
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 36 0.011
SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomy... 32 0.099
SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.70
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 29 0.92
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 28 1.6
SPBC31F10.11c |cwf4|syf3|complexed with Cdc5 protein Cwf4 |Schiz... 28 2.1
SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 2.8
SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual 27 4.9
SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr ... 26 8.6
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 8.6
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 26 8.6
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 89.0 bits (211), Expect = 8e-19
Identities = 48/119 (40%), Positives = 66/119 (55%)
Frame = +1
Query: 376 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 555
L DG+ +P + LGT P T V+TA+ GYR ID A IYGNE +G IK + G
Sbjct: 18 LADGSKIPGLGLGTWRSEPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVGDGIK---ESG 74
Query: 556 TVRRDELFIMGKLWSTFHRTGSGGDGLQDSLADLGLEFFDLFLIHNPMSLKEGNSSIPK 732
R+D +++ KLW H + L+ +L DL L++ D +LIH P+S K G PK
Sbjct: 75 VPRKD-IWVTSKLWCNAHAPEAVPKALEKTLKDLKLDYLDEYLIHWPVSFKTGEDKFPK 132
Score = 43.2 bits (97), Expect = 5e-05
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2
Query: 779 WFGMEDLVXKGLXXNIGVSNFNLTXILKIWTKGKVKPAVNQVE 907
W ME L+ G +IG+SNFN T + +I KVKPAV+Q+E
Sbjct: 149 WKAMEKLLETGKVRHIGLSNFNDTNLERILKVAKVKPAVHQME 191
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 86.2 bits (204), Expect = 6e-18
Identities = 49/123 (39%), Positives = 67/123 (54%)
Frame = +1
Query: 364 ATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNK 543
A L +G +P I LGT T V A+ GYR IDTA+IYGNEK IG+ I+
Sbjct: 13 AYFTLPNGDKIPSIGLGTWRSGKDETKNAVCAALKAGYRHIDTAHIYGNEKEIGEGIR-- 70
Query: 544 IDDGTVRRDELFIMGKLWSTFHRTGSGGDGLQDSLADLGLEFFDLFLIHNPMSLKEGNSS 723
+ V R ++++ KLW HR G L+ +L DL LE+ D +LIH P +L G
Sbjct: 71 --ESGVPRTDIWVTSKLWCNAHRAGLVPLALEKTLQDLNLEYIDAYLIHWPFALLSGPEE 128
Query: 724 IPK 732
+P+
Sbjct: 129 LPR 131
Score = 38.7 bits (86), Expect = 0.001
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +2
Query: 779 WFGMEDLVXKGLXXNIGVSNFNLTXILKIWTKGKVKPAVNQVE 907
W ME+L+ G IG+SNFN + ++ KVKP ++Q+E
Sbjct: 148 WQAMEELLETGKVRYIGISNFNNEYLDRVLKIAKVKPTIHQME 190
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 71.3 bits (167), Expect = 2e-13
Identities = 45/123 (36%), Positives = 67/123 (54%), Gaps = 2/123 (1%)
Frame = +1
Query: 349 SVKEVATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGK 528
S E T+ L +G +P I G +L +V A+D GYR IDTA +YGNE + GK
Sbjct: 4 SQTESTTVTLTNGMVIPRIGFGAFMLKYNECYGLVTQALDSGYRHIDTAAVYGNEDICGK 63
Query: 529 AIKNKIDDGTVRRDELFIMGKL--WSTFHRTGSGGDGLQDSLADLGLEFFDLFLIHNPMS 702
AI + + V+R ++F+ KL S ++ T + ++ SL LG + DLFLI +P
Sbjct: 64 AIVDWCEKNNVKRTDIFLTSKLANCSDYYSTRA---AIRSSLHHLG-TYIDLFLIQSPAG 119
Query: 703 LKE 711
K+
Sbjct: 120 GKK 122
Score = 34.3 bits (75), Expect = 0.024
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 779 WFGMEDLVXKGLXXNIGVSNFNLTXILKIWTKG-KVKPAVNQVE 907
W ME+ V G ++GVSN+ + + +++ K P VNQ+E
Sbjct: 128 WKAMEEFVDSGDIRSVGVSNYGVKHLQELYASNPKFYPCVNQIE 171
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 59.7 bits (138), Expect = 6e-10
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Frame = +1
Query: 394 MPVIALGTALLPP------RLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 555
+P +GTAL R + V+ A+ G+ ID A +YGNE+ +G A+K +
Sbjct: 12 VPAYGVGTALFKKEKGEINRTIVDSVKNALAAGFIHIDCAEVYGNEEEVGVALK----EA 67
Query: 556 TVRRDELFIMGKLWSTFHRTGSGGDGLQDSLADLGLEFFDLFLIHNPMSLKE 711
V R +LFI K+ H + + L +SL LG ++ DL+L+H+P+ E
Sbjct: 68 NVPRSKLFITSKV---MHNVDNIPEALNESLRKLGTDYLDLYLLHSPIPFYE 116
Score = 36.7 bits (81), Expect = 0.005
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 779 WFGMEDLVXKGLXXNIGVSNFNLTXILKIWTKGKVKPAVNQVE 907
W ME + GL ++GVSNF + + ++ + P VNQ+E
Sbjct: 125 WKAMETALGTGLVHSVGVSNFRIPDLEELLKTSTITPRVNQIE 167
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 56.4 bits (130), Expect = 5e-09
Identities = 33/109 (30%), Positives = 57/109 (52%)
Frame = +1
Query: 370 LKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 549
+KL +G P A G+ ++ + V A+ GYR ID+A +Y NE G+AI ++
Sbjct: 6 VKLNNGLKCPQFAYGSYMVNRTKCFDSVYAALQCGYRHIDSAQMYHNEADCGRAILKFME 65
Query: 550 DGTVRRDELFIMGKLWSTFHRTGSGGDGLQDSLADLGLEFFDLFLIHNP 696
+ +R++++ KL + S + S+ GL + DLFL+H+P
Sbjct: 66 ETGTKREDIWFTSKL-NDLSGYKSTLSSIDASVKACGLGYIDLFLLHSP 113
Score = 29.5 bits (63), Expect = 0.70
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 779 WFGMEDLVXKGLXXNIGVSNFNLTXILKIW-TKGKVKPAVNQVE 907
W +E V +G IGVSNF I ++ + K+ P VNQ+E
Sbjct: 121 WKALEKGVEEGKLRAIGVSNFGPHHIQELLDSHPKIIPCVNQIE 164
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 35.5 bits (78), Expect = 0.011
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Frame = +1
Query: 439 TTEIVETAIDMGYRAIDTAYIYGN---EKLIGKAIKNKIDDGT--VRRDELFIMGKLWST 603
T ++ A D+G DTA IY N E ++GKAIK D + V ++F G
Sbjct: 46 TKNCLKQAWDLGINTFDTAEIYSNGNSETVMGKAIKELGWDRSEYVITTKVF-FGAGTKL 104
Query: 604 FHRTGSGG----DGLQDSLADLGLEFFDLFLIHNP 696
+ TG +GL SL LGL + D+ + H P
Sbjct: 105 PNTTGLSRKHIIEGLNASLKRLGLPYVDVIMAHRP 139
>SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 276
Score = 32.3 bits (70), Expect = 0.099
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 779 WFGMEDLVXKGLXXNIGVSNFNLTXILKIWTKGKVKPAVNQVE 907
W + +G IGVSN+N+ + +I + G PA+NQVE
Sbjct: 122 WRALLQHQKEGRINKIGVSNYNIHHLEEIISLGLPLPAINQVE 164
>SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 773
Score = 29.5 bits (63), Expect = 0.70
Identities = 20/78 (25%), Positives = 37/78 (47%)
Frame = +1
Query: 343 KGSVKEVATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLI 522
K S+K++ G ++ G A++P L +++ A +G R + G +LI
Sbjct: 366 KSSLKKMNQNSQLTGYIAVLLKKGLAIVPYTLPIKML-LADAVGKRTSKIGKLRGTNELI 424
Query: 523 GKAIKNKIDDGTVRRDEL 576
G+ + K +G RD+L
Sbjct: 425 GEGVLTKSKNGPSMRDQL 442
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 29.1 bits (62), Expect = 0.92
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = -2
Query: 338 LASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTEVIFLNTKKHNMNQ 174
++SFS+ + +LY + +S VS +PL + L G S+LT +I++ K+ Q
Sbjct: 49 ISSFSTHLNILYFNLSKSMVSFAQVPL-EEYLNLLGHSLLTSIIYVMLKRRFYEQ 102
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2386
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 395 MNVPSRSFKVAT-SFTLPFSLASFSSAILVLYCSSVRSPVSRFCL 264
MN+ F + T ++TLPF + + + A++V +S V+ CL
Sbjct: 726 MNISEGDFLIRTQAYTLPFLVLTKNKALIVRIAELSQSDVATLCL 770
>SPBC31F10.11c |cwf4|syf3|complexed with Cdc5 protein Cwf4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 674
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -1
Query: 621 RSGAMECTPQFTHNEKLVSPHGAVVNLVLD--RFSYE 517
RS +ME ++TH EK H V + VLD R YE
Sbjct: 273 RSKSMELYKEYTHFEKQFGDHLGVESTVLDKRRLQYE 309
>SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 255
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 389 VPSRSFKVATSFTLPFSLASFSSAILV 309
+PS+ F++ T F PF+ FS +++V
Sbjct: 177 LPSQRFEIVTGFLSPFNKLYFSKSLIV 203
>SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 26.6 bits (56), Expect = 4.9
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 467 SIAVSTISVVNRGGSKAVPKAMTGMNVPSRSFKVA--TSFTLPFSLASFSS 321
SI STI+ GS+ +TG N P + +V T+ T +L S SS
Sbjct: 99 SIITSTITTTITSGSQLYTTTITGQNTPVDTVEVVIPTAGTFTTTLTSGSS 149
>SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 391
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 773 TPWFGMEDLVXKGLXXNIGVSNFNLTXIL 859
+PWF E LV +G NI FN + L
Sbjct: 87 SPWFRQETLVLEGHEHNIPCITFNSSGTL 115
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 683 RKRSKNSKPRSASESCRPSPPDPVRWNVLHNLPI 582
R R K +S S P PP P R N ++P+
Sbjct: 320 RNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPL 353
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -2
Query: 356 FTLPFSLASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTE 213
F+ P++LA S +L + P + CL L R P D++ ++
Sbjct: 301 FSPPWNLAFASMLSQLLKWDPAKRPTAEMCLDLEFCRVSAPADAVASK 348
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,499,453
Number of Sequences: 5004
Number of extensions: 71006
Number of successful extensions: 266
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 262
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 464508080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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