BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_A11
(915 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 24 1.7
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 23 5.1
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 23 5.1
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 23 5.1
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 6.8
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 6.8
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 6.8
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 22 6.8
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 8.9
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 8.9
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 8.9
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 8.9
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 8.9
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 8.9
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.9
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 24.2 bits (50), Expect = 1.7
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 590 NCGVHSIAPDLVETACRIHW 649
N V SI+PDLVET W
Sbjct: 185 NIKVISISPDLVETDMTAQW 204
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 22.6 bits (46), Expect = 5.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 784 EPGRPCSRTPSIGSLMISSV*NCCLP 707
EPG PC T G ++ SS+ + +P
Sbjct: 183 EPGTPCQLTRRQGYVIYSSLGSFFIP 208
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 22.6 bits (46), Expect = 5.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 784 EPGRPCSRTPSIGSLMISSV*NCCLP 707
EPG PC T G ++ SS+ + +P
Sbjct: 183 EPGTPCQLTRRQGYVIYSSLGSFFIP 208
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 22.6 bits (46), Expect = 5.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 784 EPGRPCSRTPSIGSLMISSV*NCCLP 707
EPG PC T G ++ SS+ + +P
Sbjct: 183 EPGTPCQLTRRQGYVIYSSLGSFFIP 208
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 6.8
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = +2
Query: 725 YRRYHQ*SNTRSSTTWTPWFGMEDLVXKGLXXNIGVSNFN 844
YR+Y + S RS E + L N SN+N
Sbjct: 56 YRKYRETSKERSQDRTERETSKEPKIISSLSNNYKYSNYN 95
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 6.8
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = +2
Query: 725 YRRYHQ*SNTRSSTTWTPWFGMEDLVXKGLXXNIGVSNFN 844
YR+Y + S RS E + L N SN+N
Sbjct: 56 YRKYRETSKERSQDRTERETSKEPKIISSLSNNYKYSNYN 95
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 6.8
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = +2
Query: 725 YRRYHQ*SNTRSSTTWTPWFGMEDLVXKGLXXNIGVSNFN 844
YR+Y + S RS E + L N SN+N
Sbjct: 56 YRKYRETSKERSRDRTERERSREPKIISSLSNNYNYSNYN 95
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 22.2 bits (45), Expect = 6.8
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 910 TLDLIDGRLDFAFGP 866
T DL+DG L A GP
Sbjct: 241 TFDLMDGILGLALGP 255
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.9
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = +2
Query: 725 YRRYHQ*SNTRSSTTWTPWFGMEDLVXKGLXXNIGVSNFN 844
YR+Y + S RS E + L N SN+N
Sbjct: 56 YRKYRKTSKERSRDRTERERSKEPKIISSLSNNYNYSNYN 95
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.9
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = +2
Query: 725 YRRYHQ*SNTRSSTTWTPWFGMEDLVXKGLXXNIGVSNFN 844
YR+Y + S RS E + L N SN+N
Sbjct: 56 YRKYRKTSKERSRDRTERERSKEPKIISSLSNNYNYSNYN 95
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.9
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = +2
Query: 725 YRRYHQ*SNTRSSTTWTPWFGMEDLVXKGLXXNIGVSNFN 844
YR+Y + S RS E + L N SN+N
Sbjct: 56 YRKYRKTSKERSRDRTERERSKEPKIISSLSNNYNYSNYN 95
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.9
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = +2
Query: 725 YRRYHQ*SNTRSSTTWTPWFGMEDLVXKGLXXNIGVSNFN 844
YR+Y + S RS E + L N SN+N
Sbjct: 56 YRKYRKTSKERSRDRTERERSKEPKIISSLSNNYNYSNYN 95
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.9
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = +2
Query: 725 YRRYHQ*SNTRSSTTWTPWFGMEDLVXKGLXXNIGVSNFN 844
YR+Y + S RS E + L N SN+N
Sbjct: 56 YRKYRKTSKERSRDRTERERSKEPKIISSLSNNYNYSNYN 95
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.9
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = +2
Query: 725 YRRYHQ*SNTRSSTTWTPWFGMEDLVXKGLXXNIGVSNFN 844
YR+Y + S RS E + L N SN+N
Sbjct: 56 YRKYRKTSKERSRDRTERERSKEPKIISSLSNNYNYSNYN 95
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -2
Query: 416 VPKAMTGMNVPSR 378
VPK++ G+NV SR
Sbjct: 239 VPKSVAGLNVSSR 251
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,423
Number of Sequences: 438
Number of extensions: 5145
Number of successful extensions: 36
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29750994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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