Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_A10
(899 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X80695-1|CAA56712.1| 435|Homo sapiens OXA1Hs protein. 112 1e-24
BC112331-1|AAI12332.1| 496|Homo sapiens oxidase (cytochrome c) ... 112 1e-24
BC001669-1|AAH01669.2| 437|Homo sapiens OXA1L protein protein. 112 1e-24
AJ001981-1|CAA05127.1| 495|Homo sapiens OXA1L protein. 112 1e-24
BC101684-1|AAI01685.1| 333|Homo sapiens COX18 cytochrome c oxid... 41 0.007
AY957565-1|AAY35061.1| 333|Homo sapiens mitochondrial COX18 pro... 41 0.007
AY957564-1|AAY35060.1| 333|Homo sapiens mitochondrial COX18 pro... 41 0.007
AK096310-1|BAC04758.1| 333|Homo sapiens protein ( Homo sapiens ... 41 0.007
BC071812-1|AAH71812.1| 156|Homo sapiens COX18 protein protein. 36 0.26
BC110806-1|AAI10807.1| 234|Homo sapiens hypothetical LOC441177 ... 32 2.5
AK094116-1|BAC04291.1| 234|Homo sapiens protein ( Homo sapiens ... 32 2.5
>X80695-1|CAA56712.1| 435|Homo sapiens OXA1Hs protein.
Length = 435
Score = 112 bits (270), Expect = 1e-24
Identities = 53/149 (35%), Positives = 83/149 (55%)
Frame = +2
Query: 431 EPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVRVVMFPLVILSQRNSA 610
E +FA +GLG + PVGL+QN E++HV L +PWWGAI T+ R ++FPL++ QR +A
Sbjct: 108 EQSFAELGLGSYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAA 167
Query: 611 QMNXNLPEIQLLQMKMTQARQTGNQIEAARYAQEMMLFMXRKRIEPS*KFNCSISSNTSG 790
+++ +LPEIQ ++ +A+ G+ IE + + EM L+ + I+ ++
Sbjct: 168 RIHNHLPEIQKFSSRIREAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIF 227
Query: 791 YILFYGIXRNG*LSCRSXTIGGLWWFVXL 877
F + L S GGLWWF L
Sbjct: 228 ISFFIALREMANLPVPSLQTGGLWWFQDL 256
>BC112331-1|AAI12332.1| 496|Homo sapiens oxidase (cytochrome c)
assembly 1-like protein.
Length = 496
Score = 112 bits (270), Expect = 1e-24
Identities = 53/149 (35%), Positives = 83/149 (55%)
Frame = +2
Query: 431 EPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVRVVMFPLVILSQRNSA 610
E +FA +GLG + PVGL+QN E++HV L +PWWGAI T+ R ++FPL++ QR +A
Sbjct: 168 EQSFAELGLGSYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAA 227
Query: 611 QMNXNLPEIQLLQMKMTQARQTGNQIEAARYAQEMMLFMXRKRIEPS*KFNCSISSNTSG 790
+++ +LPEIQ ++ +A+ G+ IE + + EM L+ + I+ ++
Sbjct: 228 RIHNHLPEIQKFSSRIREAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIF 287
Query: 791 YILFYGIXRNG*LSCRSXTIGGLWWFVXL 877
F + L S GGLWWF L
Sbjct: 288 ISFFIALREMANLPVPSLQTGGLWWFQDL 316
>BC001669-1|AAH01669.2| 437|Homo sapiens OXA1L protein protein.
Length = 437
Score = 112 bits (270), Expect = 1e-24
Identities = 53/149 (35%), Positives = 83/149 (55%)
Frame = +2
Query: 431 EPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVRVVMFPLVILSQRNSA 610
E +FA +GLG + PVGL+QN E++HV L +PWWGAI T+ R ++FPL++ QR +A
Sbjct: 110 EQSFAELGLGSYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAA 169
Query: 611 QMNXNLPEIQLLQMKMTQARQTGNQIEAARYAQEMMLFMXRKRIEPS*KFNCSISSNTSG 790
+++ +LPEIQ ++ +A+ G+ IE + + EM L+ + I+ ++
Sbjct: 170 RIHNHLPEIQKFSSRIREAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIF 229
Query: 791 YILFYGIXRNG*LSCRSXTIGGLWWFVXL 877
F + L S GGLWWF L
Sbjct: 230 ISFFIALREMANLPVPSLQTGGLWWFQDL 258
>AJ001981-1|CAA05127.1| 495|Homo sapiens OXA1L protein.
Length = 495
Score = 112 bits (270), Expect = 1e-24
Identities = 53/149 (35%), Positives = 83/149 (55%)
Frame = +2
Query: 431 EPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVRVVMFPLVILSQRNSA 610
E +FA +GLG + PVGL+QN E++HV L +PWWGAI T+ R ++FPL++ QR +A
Sbjct: 168 EQSFAELGLGSYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAA 227
Query: 611 QMNXNLPEIQLLQMKMTQARQTGNQIEAARYAQEMMLFMXRKRIEPS*KFNCSISSNTSG 790
+++ +LPEIQ ++ +A+ G+ IE + + EM L+ + I+ ++
Sbjct: 228 RIHNHLPEIQKFSSRIREAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIF 287
Query: 791 YILFYGIXRNG*LSCRSXTIGGLWWFVXL 877
F + L S GGLWWF L
Sbjct: 288 ISFFIALREMANLPVPSLQTGGLWWFQDL 316
>BC101684-1|AAI01685.1| 333|Homo sapiens COX18 cytochrome c oxidase
assembly homolog (S. cerevisiae) protein.
Length = 333
Score = 40.7 bits (91), Expect = 0.007
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 395 AVSAVQSFAANGEPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVR-VV 571
AV+ V + ANG L PV + + +H +PWWG+I+L T+ +R V
Sbjct: 42 AVAPVSAVHANGWYE----ALAASSPVRVAEEVLLGVHAATGLPWWGSILLSTVALRGAV 97
Query: 572 MFPLVILSQRNSAQMNXNLPEIQLLQMKMTQ 664
PL A++ PEI+ + + Q
Sbjct: 98 TLPLAAYQHYILAKVENLQPEIKTIARHLNQ 128
>AY957565-1|AAY35061.1| 333|Homo sapiens mitochondrial COX18
protein.
Length = 333
Score = 40.7 bits (91), Expect = 0.007
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 395 AVSAVQSFAANGEPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVR-VV 571
AV+ V + ANG L PV + + +H +PWWG+I+L T+ +R V
Sbjct: 42 AVAPVSAVHANGWYE----ALAASSPVRVAEEVLLGVHAATGLPWWGSILLSTVALRGAV 97
Query: 572 MFPLVILSQRNSAQMNXNLPEIQLLQMKMTQ 664
PL A++ PEI+ + + Q
Sbjct: 98 TLPLAAYQHYILAKVENLQPEIKTIARHLNQ 128
>AY957564-1|AAY35060.1| 333|Homo sapiens mitochondrial COX18
protein.
Length = 333
Score = 40.7 bits (91), Expect = 0.007
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 395 AVSAVQSFAANGEPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVR-VV 571
AV+ V + ANG L PV + + +H +PWWG+I+L T+ +R V
Sbjct: 42 AVAPVSAVHANGWYE----ALAASSPVRVAEEVLLGVHAATGLPWWGSILLSTVALRGAV 97
Query: 572 MFPLVILSQRNSAQMNXNLPEIQLLQMKMTQ 664
PL A++ PEI+ + + Q
Sbjct: 98 TLPLAAYQHYILAKVENLQPEIKTIARHLNQ 128
>AK096310-1|BAC04758.1| 333|Homo sapiens protein ( Homo sapiens
cDNA FLJ38991 fis, clone NT2RI2008622. ).
Length = 333
Score = 40.7 bits (91), Expect = 0.007
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 395 AVSAVQSFAANGEPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVR-VV 571
AV+ V + ANG L PV + + +H +PWWG+I+L T+ +R V
Sbjct: 42 AVAPVSAVHANGWYE----ALAASSPVRVAEEVLLGVHAATGLPWWGSILLSTVALRGAV 97
Query: 572 MFPLVILSQRNSAQMNXNLPEIQLLQMKMTQ 664
PL A++ PEI+ + + Q
Sbjct: 98 TLPLAAYQHYILAKVENLQPEIKTIARHLNQ 128
>BC071812-1|AAH71812.1| 156|Homo sapiens COX18 protein protein.
Length = 156
Score = 35.5 bits (78), Expect = 0.26
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 395 AVSAVQSFAANGEPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVR-VV 571
AV+ V + ANG L PV + + +H +PWWG+I+L T+ +R V
Sbjct: 42 AVAPVSAVHANGWYE----ALAASSPVRVAEEVLLGVHAATGLPWWGSILLSTVALRGAV 97
Query: 572 MFPL 583
PL
Sbjct: 98 TLPL 101
>BC110806-1|AAI10807.1| 234|Homo sapiens hypothetical LOC441177
protein.
Length = 234
Score = 32.3 bits (70), Expect = 2.5
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 537 APHHGTSKVTCRYSKQFCTNPTGPQP-PRPMLANVG 433
AP + S V+ + Q CT P PQP PRP+ VG
Sbjct: 85 APEYINSAVSSQTLSQSCTPPQSPQPDPRPLSLRVG 120
>AK094116-1|BAC04291.1| 234|Homo sapiens protein ( Homo sapiens
cDNA FLJ36797 fis, clone ADRGL2006846. ).
Length = 234
Score = 32.3 bits (70), Expect = 2.5
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 537 APHHGTSKVTCRYSKQFCTNPTGPQP-PRPMLANVG 433
AP + S V+ + Q CT P PQP PRP+ VG
Sbjct: 85 APEYINSAVSSQTLSQSCTPPQSPQPDPRPLSLRVG 120
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,766,606
Number of Sequences: 237096
Number of extensions: 2585589
Number of successful extensions: 5558
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5541
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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