Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_A10
         (899 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81029-7|CAB02698.2|  366|Caenorhabditis elegans Hypothetical pr...    66   3e-11
Z82078-6|CAB04946.1|  257|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z71181-7|CAA94900.2|  485|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AC006664-2|AAF39903.1|  346|Caenorhabditis elegans Hypothetical ...    29   4.5  
U97196-7|AAB52462.1|  141|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AF101316-1|AAC69231.1|  684|Caenorhabditis elegans Hypothetical ...    28   7.9  
AF067219-6|AAC17030.1|  382|Caenorhabditis elegans Innexin prote...    28   7.9  

>Z81029-7|CAB02698.2|  366|Caenorhabditis elegans Hypothetical
           protein C01A2.3 protein.
          Length = 366

 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 1/159 (0%)
 Frame = +2

Query: 404 AVQSFAANGEPTFASIGLGGWG-PVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVRVVMFP 580
           +V    A+G      +GL  W  P    +   E +HV LD+PWW  IV  T+ +R ++  
Sbjct: 64  SVDELIASGASVLEELGLWTWWKPSSYFRWALESIHVHLDIPWWVTIVAATVTLRALLIG 123

Query: 581 LVILSQRNSAQMNXNLPEIQLLQMKMTQARQTGNQIEAARYAQEMMLFMXRKRIEPS*KF 760
           + ++SQ+  A+ +    E+   + ++ +AR+  NQ+   +   E   F+  K I    +F
Sbjct: 124 VPVMSQKLVAKQSMYRKEMNEFRDRIDEARKENNQLLQQQILLEQRDFLRSKDIRLGRQF 183

Query: 761 NCSISSNTSGYILFYGIXRNG*LSCRSXTIGGLWWFVXL 877
               ++       F+ I +   ++    + GG  WF  L
Sbjct: 184 MVMAANGAVFATQFFAIKKMVVVNYPGLSTGGTLWFTDL 222


>Z82078-6|CAB04946.1|  257|Caenorhabditis elegans Hypothetical
           protein W09D6.5 protein.
          Length = 257

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = +2

Query: 158 NNRNTPCSXLLNRPGRRSAVMKLFCEKVEVRTPRIFYVYSSAGSVRFASTLGSDAGKTLP 337
           +NR T  +   + P R+S VM    +     +PR  ++ SS  S R +S++ S+ G   P
Sbjct: 79  SNRQTKSNKKSSPPPRKSPVMTSSYQVQYPNSPRDLHLVSSTPSSRSSSSMSSNNGIVSP 138


>Z71181-7|CAA94900.2|  485|Caenorhabditis elegans Hypothetical
           protein K07C5.7 protein.
          Length = 485

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 586 HKWEHNNSDNYCAQDNCTPPWNI*SDVQIFET 491
           H ++ NN D Y   D+ TP W I S  + F T
Sbjct: 235 HPFDANNVDKYVVGDDYTPIWEINSLKKYFNT 266


>AC006664-2|AAF39903.1|  346|Caenorhabditis elegans Hypothetical
           protein H24O09.2 protein.
          Length = 346

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 21/54 (38%), Positives = 27/54 (50%)
 Frame = -2

Query: 568 NSDNYCAQDNCTPPWNI*SDVQIFETVLHQSNWSPTS*AYAGKRRFTIRSKRLD 407
           + DNYC Q+ C     +  DVQ F + L   N   +S      R F+ RSKRLD
Sbjct: 140 SKDNYCTQEFCDEFKEL--DVQTFVSPLQMDN---SSFYQKIIRMFSSRSKRLD 188


>U97196-7|AAB52462.1|  141|Caenorhabditis elegans Hypothetical
           protein B0207.8 protein.
          Length = 141

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -2

Query: 721 KHHFLSISCSFNLISSLPGLCHFHLQ*LY 635
           K HF   +  F+ IS LPG    HLQ +Y
Sbjct: 54  KKHFSYFAIRFSFISLLPGFSVVHLQFMY 82


>AF101316-1|AAC69231.1|  684|Caenorhabditis elegans Hypothetical
           protein F52F10.3 protein.
          Length = 684

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 509 VTLDVPWWGAIVLGTIVVRVVMFPLVI 589
           V  DVP+WG  V  TIV+ V +F  ++
Sbjct: 166 VEKDVPFWGFTVFLTIVIAVAIFATLL 192


>AF067219-6|AAC17030.1|  382|Caenorhabditis elegans Innexin protein
           15 protein.
          Length = 382

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 521 HLK*RADIRNSSAPIQLVPNLLGLCW 444
           HLK   D +   +PI L+PN++G  W
Sbjct: 159 HLKKYIDRQGRKSPIPLIPNIIGRNW 184


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,650,631
Number of Sequences: 27780
Number of extensions: 409996
Number of successful extensions: 938
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)