Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_A09
         (899 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              27   0.18 
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   8.8  

>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 27.5 bits (58), Expect = 0.18
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = +2

Query: 563 KRFLGTAQSVGCTVEGRPPHDLIDDINSGALTIDE*MFLISI 688
           K  L T QSV C  E      +IDDIN G + +D+   L+ I
Sbjct: 23  KSGLHTVQSV-CMKEIGTAQQIIDDINEGKINMDDENVLLFI 63


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/45 (20%), Positives = 20/45 (44%)
 Frame = +1

Query: 472 HNGNISLEDVIGIAKIMRNRSMARYLSGSVKEILGHSTVSWMYCG 606
           H+ NI   D+     ++ ++   + +     + L H   +W +CG
Sbjct: 483 HSRNIIYRDLKPENLLLDSQGYVKLVDFGFAKRLDHGRKTWTFCG 527


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,147
Number of Sequences: 438
Number of extensions: 4407
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)