Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_A07
         (917 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0144 + 26258841-26258948,26259099-26259212,26259335-262595...    55   9e-08
04_04_0678 + 27207340-27207447,27207555-27207668,27209111-272093...    54   2e-07
03_06_0282 - 32824950-32825135,32825247-32825505,32825651-328259...    50   3e-06
01_05_0337 + 21115388-21115961,21116471-21116597,21116683-211168...    36   0.034
03_01_0006 + 65675-65808,66385-66457,68290-68526,68648-68785,688...    28   9.0  

>02_05_0144 +
           26258841-26258948,26259099-26259212,26259335-26259556,
           26259660-26259734,26259827-26259943,26260046-26260296,
           26260833-26260908,26261045-26261131,26261216-26261401
          Length = 411

 Score = 54.8 bits (126), Expect = 9e-08
 Identities = 30/91 (32%), Positives = 44/91 (48%)
 Frame = +3

Query: 534 LEIQFPLRRDSGDXEMILGYRAQHSTHRTPTKGGIRFSTDXTRDEVKALSXFDDLQVRVR 713
           ++++  + +D G     +G+R QH   R P KGGIR+  +   DEV AL+     +  V 
Sbjct: 35  IKVECTIPKDDGTLATFVGFRVQHDNSRGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA 94

Query: 714 LTCLSAVLRPGIRIXPKEYSEHELEXITRRF 806
                   + GI   P E S  ELE +TR F
Sbjct: 95  AVPYGGA-KGGIGCTPGELSRSELERLTRVF 124


>04_04_0678 +
           27207340-27207447,27207555-27207668,27209111-27209332,
           27209407-27209481,27209569-27209685,27210145-27210395,
           27210686-27210761,27210862-27210948,27211037-27211222
          Length = 411

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 30/91 (32%), Positives = 44/91 (48%)
 Frame = +3

Query: 534 LEIQFPLRRDSGDXEMILGYRAQHSTHRTPTKGGIRFSTDXTRDEVKALSXFDDLQVRVR 713
           ++++  + +D G     +G+R QH   R P KGGIR+  +   DEV AL+     +  V 
Sbjct: 35  IKVECTIPKDDGTLASFIGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA 94

Query: 714 LTCLSAVLRPGIRIXPKEYSEHELEXITRRF 806
                   + GI   P E S  ELE +TR F
Sbjct: 95  AIPYGGA-KGGIGCAPGELSTSELERLTRVF 124


>03_06_0282 -
           32824950-32825135,32825247-32825505,32825651-32825901,
           32826309-32826425,32826613-32826687,32826788-32827009,
           32827396-32827509,32827694-32827801
          Length = 443

 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 29/91 (31%), Positives = 44/91 (48%)
 Frame = +3

Query: 534 LEIQFPLRRDSGDXEMILGYRAQHSTHRTPTKGGIRFSTDXTRDEVKALSXFDDLQVRVR 713
           ++++  + +D G     +G+R QH   R P KGGIR+  +   DEV AL+     +  V 
Sbjct: 35  IKVECTIPKDDGTLASYVGFRVQHDNARGPMKGGIRYHHEVDPDEVNALAQLMTWKTAVA 94

Query: 714 LTCLSAVLRPGIRIXPKEYSEHELEXITRRF 806
                   + GI   P + S  ELE +TR F
Sbjct: 95  NIPYGGA-KGGIGCSPGDLSISELERLTRVF 124


>01_05_0337 +
           21115388-21115961,21116471-21116597,21116683-21116884,
           21117460-21117546,21117622-21117681,21117800-21117886,
           21118451-21118522,21118675-21118730,21118812-21118897,
           21119427-21119517,21119593-21119750,21119827-21119918,
           21120110-21120190,21120282-21120479
          Length = 656

 Score = 36.3 bits (80), Expect = 0.034
 Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 1/121 (0%)
 Frame = +3

Query: 447 EDLKSRTPIEEKKKKVAGIL-KLMEPCDHILEIQFPLRRDSGDXEMILGYRAQHSTHRTP 623
           E + S  P+  K  +   IL +L+EP +     + P   D G+  +  G+R Q S    P
Sbjct: 220 EVVHSLEPVLVKNSQHVQILERLLEP-ERCFIFRVPWVDDRGEAHVNRGFRVQFSQALGP 278

Query: 624 TKGGIRFSTDXTRDEVKALSXFDDLQVRVRLTCLSAVLRPGIRIXPKEYSEHELEXITRR 803
            +GG+RF    T    K L+    L+  +    L      G    PK  SE E+    + 
Sbjct: 279 CRGGLRFHPSMTLSVAKFLAFEQTLKNALSQYKLGGA-AGGSDFDPKGKSESEIMRFCQS 337

Query: 804 F 806
           F
Sbjct: 338 F 338


>03_01_0006 + 65675-65808,66385-66457,68290-68526,68648-68785,
            68871-69005,69131-69310,69495-69701,69821-69943,
            70240-70359,70758-70880,72067-72171,72254-72398,
            73443-73607,73669-73907,74452-74484,74977-75058,
            75200-75360,75739-75951,76789-76971,77051-77220,
            77375-77474
          Length = 1021

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -3

Query: 669  LHLWLXPLRIEYLLWLESCVWNVVRDSLISFRNRQNRASE 550
            ++L L P++      L    WN+V D+ ++F NR++   E
Sbjct: 905  VYLLLDPMKFAVRYGLSGKAWNLVIDNKVAFTNRKDFGRE 944


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,178,217
Number of Sequences: 37544
Number of extensions: 489101
Number of successful extensions: 1050
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)