Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_A07
         (917 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical pr...   141   7e-34
U28738-2|AAA68309.4|  982|Caenorhabditis elegans Hypothetical pr...    31   0.87 
Z78016-5|CAB01442.2|  479|Caenorhabditis elegans Hypothetical pr...    30   2.7  
AF000299-10|AAC47986.1|  338|Caenorhabditis elegans Seven tm rec...    29   6.2  
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical
           protein ZK829.4 protein.
          Length = 536

 Score =  141 bits (341), Expect = 7e-34
 Identities = 69/160 (43%), Positives = 106/160 (66%), Gaps = 1/160 (0%)
 Frame = +3

Query: 327 ASHEIPDKLKDIPTSANPKFFHMVEYFFHRACQVVEDKLVEDLKSRTPIEEKKKK-VAGI 503
           A  ++ D+ K +    NP F+ MV+++F++  +V+  KL E+LKS +  ++ KK  V+GI
Sbjct: 24  AHSQVLDEQKPMEEQVNPSFYKMVDFYFNKGAEVIAPKLAEELKSNSLSQKDKKNLVSGI 83

Query: 504 LKLMEPCDHILEIQFPLRRDSGDXEMILGYRAQHSTHRTPTKGGIRFSTDXTRDEVKALS 683
           L  ++P + +L I FP+RRD+G+ E+I  +RAQHS HRTPTKGGIR+S D   DEVKALS
Sbjct: 84  LGAIKPVNKVLYITFPIRRDNGEFEVIEAWRAQHSEHRTPTKGGIRYSLDVCEDEVKALS 143

Query: 684 XFDDLQVRVRLTCLSAVLRPGIRIXPKEYSEHELEXITRR 803
                +  V +       + G++I PK+Y+++E+E ITRR
Sbjct: 144 ALMTYKCAV-VDVPFGGAKGGVKIDPKQYTDYEIEKITRR 182



 Score = 36.3 bits (80), Expect = 0.031
 Identities = 23/68 (33%), Positives = 32/68 (47%)
 Frame = +2

Query: 713 VDVPFGGAKARYQDXSQRILRA*TGKXHSSVSPLNLPKKDXWGLAWMSPLLAWGTGQRKM 892
           VDVPFGGAK   +   ++       K    ++ +   KK   G     P    GTG+R+M
Sbjct: 153 VDVPFGGAKGGVKIDPKQYTDYEIEKITRRIA-IEFAKKGFLGPGVDVPAPDMGTGEREM 211

Query: 893 XWIXDIFA 916
            WI D +A
Sbjct: 212 GWIADTYA 219


>U28738-2|AAA68309.4|  982|Caenorhabditis elegans Hypothetical
           protein T28D9.7 protein.
          Length = 982

 Score = 31.5 bits (68), Expect = 0.87
 Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
 Frame = +3

Query: 246 KNSVQNEAL--NTMFRIIPAGVNVCCRTYASHEIPDKLKDIPTSANPKFFHMVEYFFHRA 419
           ++ V+ E L  N  F  +  G    C    S  I  + K     AN  FF + E  F+R 
Sbjct: 443 EDDVEQEELDENVSFSTVSGGETFSCED-KSRPITSEEK----KANQMFFLLDETAFNR- 496

Query: 420 CQVVEDKLVEDLKSR--TPIEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGD 572
                   V DLKSR    +++  +++A IL++ME   H+      +R  +GD
Sbjct: 497 -NATRYMSVGDLKSRYGDKVDDVAEEIAVILRIMEKLWHVFMPDSYIRTMTGD 548


>Z78016-5|CAB01442.2|  479|Caenorhabditis elegans Hypothetical
           protein R186.5 protein.
          Length = 479

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 201 WWLIMLSTTIGLGIGSPYTY 142
           WW I+  TTIG G  +P+TY
Sbjct: 368 WWAIVTMTTIGYGDITPHTY 387


>AF000299-10|AAC47986.1|  338|Caenorhabditis elegans Seven tm
           receptor protein 162 protein.
          Length = 338

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 614 VCGMLCAIA*YHFXIARIAPQRKLNLKNVIAWF 516
           +CG+L  +   HF     A QRK NLK    W+
Sbjct: 95  ICGVLMPMFVVHFIFRYFAMQRKGNLKYFEGWY 127


>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical
           protein W06A7.3f protein.
          Length = 2488

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 468 PIEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDXEMIL 587
           PIE  +++   + K  E CDH+++ Q  L R S   E I+
Sbjct: 444 PIENSEQETVAV-KATESCDHVVDSQKTLERASSLEEDIM 482


>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical
           protein W06A7.3c protein.
          Length = 2484

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 468 PIEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDXEMIL 587
           PIE  +++   + K  E CDH+++ Q  L R S   E I+
Sbjct: 444 PIENSEQETVAV-KATESCDHVVDSQKTLERASSLEEDIM 482


>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical
           protein W06A7.3a protein.
          Length = 2607

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 468 PIEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDXEMIL 587
           PIE  +++   + K  E CDH+++ Q  L R S   E I+
Sbjct: 444 PIENSEQETVAV-KATESCDHVVDSQKTLERASSLEEDIM 482


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,143,239
Number of Sequences: 27780
Number of extensions: 420438
Number of successful extensions: 1015
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)