Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_A05
(916 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical pr... 166 2e-41
AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein. 166 2e-41
U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protei... 101 5e-22
AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin prot... 93 3e-19
AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin prot... 93 3e-19
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 43 3e-04
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 43 3e-04
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 43 3e-04
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical pr... 37 0.023
U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.87
U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein. 31 1.1
U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein. 31 1.1
U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein. 31 1.1
U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein. 31 1.1
U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein. 31 1.1
AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated... 31 1.1
AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated... 31 1.1
AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated... 31 1.1
U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical pr... 30 2.0
U80840-13|AAB37936.2| 182|Caenorhabditis elegans Hypothetical p... 30 2.7
Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical p... 28 8.1
AC084153-10|AAK84591.1| 184|Caenorhabditis elegans Hypothetical... 28 8.1
>Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical
protein F43G9.9 protein.
Length = 192
Score = 166 bits (404), Expect = 2e-41
Identities = 81/144 (56%), Positives = 107/144 (74%), Gaps = 1/144 (0%)
Frame = +2
Query: 323 QGDMDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQ 502
QGD DN +V +DG+LLC LAN++ P +KK+NTS+MAFK MENI+ FL+ A + V
Sbjct: 50 QGDADNLVKVFQDGSLLCTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKS 108
Query: 503 ETFQTVDLWERQNLNSVVICLQSLGRKAG-TYGKPSIGPKEAEKNVRNFSEEQLRAGQGV 679
E FQTVDL+E Q+ N+V+ICL SL RK+ +G+ +GPKEA+ + R +++EQL+AG V
Sbjct: 109 ELFQTVDLYEGQDPNAVLICLASLARKSEKNFGRSGLGPKEAQGDRREWTDEQLKAGHNV 168
Query: 680 ISLQYGSNKGANQSGINFGNTRHM 751
I LQ GSNKGA SG+N GNTRHM
Sbjct: 169 IGLQMGSNKGATASGLNMGNTRHM 192
Score = 35.1 bits (77), Expect = 0.071
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +3
Query: 189 ANNRATKSGFAAEAQRKINSKYSEELAHESL 281
+++RA KSG A EAQ+KI KY + LA E L
Sbjct: 6 SSDRAEKSGIALEAQQKIYEKYDKNLAGEIL 36
>AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein.
Length = 192
Score = 166 bits (404), Expect = 2e-41
Identities = 81/144 (56%), Positives = 107/144 (74%), Gaps = 1/144 (0%)
Frame = +2
Query: 323 QGDMDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQ 502
QGD DN +V +DG+LLC LAN++ P +KK+NTS+MAFK MENI+ FL+ A + V
Sbjct: 50 QGDADNLVKVFQDGSLLCTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKS 108
Query: 503 ETFQTVDLWERQNLNSVVICLQSLGRKAG-TYGKPSIGPKEAEKNVRNFSEEQLRAGQGV 679
E FQTVDL+E Q+ N+V+ICL SL RK+ +G+ +GPKEA+ + R +++EQL+AG V
Sbjct: 109 ELFQTVDLYEGQDPNAVLICLASLARKSEKNFGRSGLGPKEAQGDRREWTDEQLKAGHNV 168
Query: 680 ISLQYGSNKGANQSGINFGNTRHM 751
I LQ GSNKGA SG+N GNTRHM
Sbjct: 169 IGLQMGSNKGATASGLNMGNTRHM 192
Score = 35.1 bits (77), Expect = 0.071
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +3
Query: 189 ANNRATKSGFAAEAQRKINSKYSEELAHESL 281
+++RA KSG A EAQ+KI KY + LA E L
Sbjct: 6 SSDRAEKSGIALEAQQKIYEKYDKNLAGEIL 36
>U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protein 3
protein.
Length = 142
Score = 101 bits (243), Expect = 5e-22
Identities = 50/92 (54%), Positives = 63/92 (68%)
Frame = +2
Query: 326 GDMDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQE 505
G+ DNF+ +LKDGTLLCK AN I IKK+ F CMENINAF+E A++ GVP +E
Sbjct: 46 GERDNFHNLLKDGTLLCKAANGIEAGSIKKVQKPISTFACMENINAFVEFAKKQGVPNEE 105
Query: 506 TFQTVDLWERQNLNSVVICLQSLGRKAGTYGK 601
TFQ+V+L E ++L SV + L SLGR GK
Sbjct: 106 TFQSVELVEGRDLFSVCVTLLSLGRVLQKAGK 137
>AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin protein
2 protein.
Length = 203
Score = 92.7 bits (220), Expect = 3e-19
Identities = 55/132 (41%), Positives = 75/132 (56%), Gaps = 5/132 (3%)
Frame = +2
Query: 350 VLKDGTLLCKLANNIHPNMIKKINTS-SMAFKCMENINAFLEAARQLGVPAQETFQTVDL 526
+LKDG +LCKL + P+ N MAF MENI+ FL AA+Q GV FQTVDL
Sbjct: 58 LLKDGVMLCKLIEKLDPSCRVVYNKKPKMAFPMMENISNFLAAAKQFGVMEISCFQTVDL 117
Query: 527 WERQNLNSVVICLQSLGRKAGTYGK----PSIGPKEAEKNVRNFSEEQLRAGQGVISLQY 694
+E + V+ CL+ L A + P+ K A+ + R F E +R G+ VI LQY
Sbjct: 118 YENKQCYKVIECLRLLAAVAQSRSSHLEHPAWVVKLAQSSPRQFPEAVMRRGEMVIPLQY 177
Query: 695 GSNKGANQSGIN 730
G+NK A+Q G++
Sbjct: 178 GTNKCASQKGMS 189
>AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin protein
4 protein.
Length = 154
Score = 92.7 bits (220), Expect = 3e-19
Identities = 50/104 (48%), Positives = 62/104 (59%)
Frame = +2
Query: 323 QGDMDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQ 502
+ DNF E LKDG LCKL N I +KKI F C+ENIN F AAR LGV +
Sbjct: 48 EASRDNFREQLKDGQRLCKLVNAIKAGSVKKIMKPISNFNCLENINQFSTAARSLGVKDE 107
Query: 503 ETFQTVDLWERQNLNSVVICLQSLGRKAGTYGKPSIGPKEAEKN 634
ETFQ+VDL++ ++L SV + LQSL RK G PK+ K+
Sbjct: 108 ETFQSVDLFDGRDLFSVTVTLQSLARKVEKLG--ITPPKQVSKD 149
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 43.2 bits (97), Expect = 3e-04
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Frame = +2
Query: 326 GDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAF-LEAARQLG 490
G M F VL+DG LLC+LAN + PN I KKI ++ F C NIN F +
Sbjct: 27 GTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFCKTYFN 86
Query: 491 VPAQETFQTVDLWERQNLNSVVICLQSL 574
+ + F DL+ V+ L L
Sbjct: 87 LEDADLFTAEDLYYMNGFQKVLKTLSFL 114
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 43.2 bits (97), Expect = 3e-04
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Frame = +2
Query: 326 GDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAF-LEAARQLG 490
G M F VL+DG LLC+LAN + PN I KKI ++ F C NIN F +
Sbjct: 59 GTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFCKTYFN 118
Query: 491 VPAQETFQTVDLWERQNLNSVVICLQSL 574
+ + F DL+ V+ L L
Sbjct: 119 LEDADLFTAEDLYYMNGFQKVLKTLSFL 146
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 43.2 bits (97), Expect = 3e-04
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Frame = +2
Query: 326 GDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAF-LEAARQLG 490
G M F VL+DG LLC+LAN + PN I KKI ++ F C NIN F +
Sbjct: 59 GTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFCKTYFN 118
Query: 491 VPAQETFQTVDLWERQNLNSVVICLQSL 574
+ + F DL+ V+ L L
Sbjct: 119 LEDADLFTAEDLYYMNGFQKVLKTLSFL 146
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 42.3 bits (95), Expect = 5e-04
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +2
Query: 323 QGDMDNFYEVLKDGTLLCKLANNIHPNMIKKINT--SSMA-FKCMENINAFLEAARQLGV 493
+GD+ +F L DG LCK N +HP I ++ SS+A + N++ FL+ R++GV
Sbjct: 539 KGDI-SFSLQLSDGQELCKFINKLHPESISLASSTDSSIATTRSKMNVDRFLQYCRKIGV 597
Query: 494 PAQETFQTVDLWERQNLNSV 553
P +D+ ++N V
Sbjct: 598 PETTLCSQMDIISKRNPQKV 617
>U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical
protein T25F10.6a protein.
Length = 406
Score = 36.7 bits (81), Expect = 0.023
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +2
Query: 530 ERQNLNSVVICLQSLGRK-AGTYGKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNK 706
E+ + ++ LQS K A G IG +VR + +Q R QG I LQ G+NK
Sbjct: 192 EKARASDGIVPLQSGTNKLASQAGMTGIGMPRIV-DVRR-TNDQDRDSQGFIHLQMGTNK 249
Query: 707 GANQSGI-NFGNTRH 748
ANQ+G+ FG RH
Sbjct: 250 FANQAGMTGFGMPRH 264
Score = 31.9 bits (69), Expect = 0.66
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 650 EEQLRAGQGVISLQYGSNKGANQSGI 727
EE+ RA G++ LQ G+NK A+Q+G+
Sbjct: 191 EEKARASDGIVPLQSGTNKLASQAGM 216
Score = 31.5 bits (68), Expect = 0.87
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +2
Query: 533 RQNLNSVVICLQSLGRKAGTY--GKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNK 706
RQ +N QS+ RK Y GKPS ++E+L +G+I +Q GSNK
Sbjct: 62 RQQVNFTPSIPQSVLRKQQNYSSGKPST----------IHTKEKLMRSEGIIPIQAGSNK 111
Query: 707 GANQSGI-NFGNTR 745
A+Q G+ FG R
Sbjct: 112 YASQKGMTGFGVPR 125
>U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical
protein T25F10.6b protein.
Length = 301
Score = 31.5 bits (68), Expect = 0.87
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +2
Query: 533 RQNLNSVVICLQSLGRKAGTY--GKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNK 706
RQ +N QS+ RK Y GKPS ++E+L +G+I +Q GSNK
Sbjct: 62 RQQVNFTPSIPQSVLRKQQNYSSGKPST----------IHTKEKLMRSEGIIPIQAGSNK 111
Query: 707 GANQSGI-NFGNTR 745
A+Q G+ FG R
Sbjct: 112 YASQKGMTGFGVPR 125
>U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 650 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 745
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 120 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 152
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 656 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 748
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 256 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 287
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 629 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 748
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 12 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 52
>U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein.
Length = 565
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 650 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 745
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 328 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 360
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 656 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 748
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 464 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 495
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 629 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 748
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 220 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 260
>U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 650 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 745
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 137 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 169
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 656 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 748
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 273 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 304
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 629 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 748
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 29 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 69
>U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 650 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 745
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 120 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 152
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 656 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 748
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 256 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 287
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 629 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 748
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 12 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 52
>U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 650 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 745
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 137 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 169
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 656 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 748
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 273 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 304
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 629 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 748
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 29 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 69
>AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated
protein 87, isoform c protein.
Length = 544
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 650 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 745
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 307 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 339
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 656 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 748
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 443 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 474
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 629 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 748
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 199 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 239
>AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated
protein 87, isoform a protein.
Length = 565
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 650 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 745
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 328 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 360
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 656 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 748
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 464 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 495
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 629 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 748
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 220 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 260
>AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated
protein 87, isoform b protein.
Length = 374
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 650 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 745
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 137 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 169
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 656 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 748
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 273 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 304
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 629 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 748
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 29 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 69
>U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical
protein C53C9.2 protein.
Length = 397
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 638 RNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 748
++ EE + +G++ LQ G+NK A+Q G+ FG R+
Sbjct: 241 KDIEEELKQKSEGIVPLQSGTNKLASQRGMTGFGTPRN 278
>U80840-13|AAB37936.2| 182|Caenorhabditis elegans Hypothetical
protein F08D12.13 protein.
Length = 182
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +1
Query: 298 ITGEPENTSGGYGQLLRSA*RRHSSVQASQQHPPEHDQKDQ 420
+ G P+ +SG +GQ+ S ++H ++ + PP++ + Q
Sbjct: 110 VGGMPQQSSGSFGQMPSSGSQQHEALCKTNSLPPQYMSQQQ 150
>Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +1
Query: 346 RSA*RRHSSVQASQQHPPEHDQKDQHIVDGLQVYGEYQRFPRSRKTVGCTGTGNFSNCRP 525
R A R+ + + + PP + D GE+Q P SR T + + + P
Sbjct: 473 RPADRQSAVIPTLRGKPPAVPDSQRSGYDSSGNVGEHQSRPSSRTTSSSQRSSDAHSEEP 532
Query: 526 VGETESQLRR--DLLAVTG 576
+G S RR + +TG
Sbjct: 533 IGRNSSGARRAPEAFTITG 551
>Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +1
Query: 346 RSA*RRHSSVQASQQHPPEHDQKDQHIVDGLQVYGEYQRFPRSRKTVGCTGTGNFSNCRP 525
R A R+ + + + PP + D GE+Q P SR T + + + P
Sbjct: 473 RPADRQSAVIPTLRGKPPAVPDSQRSGYDSSGNVGEHQSRPSSRTTSSSQRSSDAHSEEP 532
Query: 526 VGETESQLRR--DLLAVTG 576
+G S RR + +TG
Sbjct: 533 IGRNSSGARRAPEAFTITG 551
>AC084153-10|AAK84591.1| 184|Caenorhabditis elegans Hypothetical
protein Y22D7AL.2 protein.
Length = 184
Score = 28.3 bits (60), Expect = 8.1
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = -2
Query: 639 RTFFSASFGPIDGFP*VPAFLPSDCKQITTELRFCLSHRSTV*KVSCAGTPNCLAASRKA 460
RT + SF G P V A S + T LR +H++T +C GTPN AAS+
Sbjct: 88 RTHQTTSFTSNCGTPNVSA--ASKQPPLHTSLR---THQTTSFTSNC-GTPNVSAASKNN 141
Query: 459 LIFSIH 442
+F++H
Sbjct: 142 HLFTLH 147
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,981,208
Number of Sequences: 27780
Number of extensions: 468556
Number of successful extensions: 1257
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1250
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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