Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_A02
(905 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43316-1|AAC46993.1| 525|Caenorhabditis elegans transmembrane r... 142 2e-34
AC006736-2|AAF60493.1| 529|Caenorhabditis elegans Abnormal cell... 142 2e-34
AC006736-1|AAF60492.1| 525|Caenorhabditis elegans Abnormal cell... 142 2e-34
Z81128-1|CAB03398.1| 568|Caenorhabditis elegans Hypothetical pr... 119 2e-27
AF013953-1|AAC47750.1| 568|Caenorhabditis elegans mom-5 protein. 119 2e-27
DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homo... 108 6e-24
AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditi... 108 6e-24
AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditi... 108 6e-24
AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein. 108 6e-24
U63557-1|AAC47301.1| 558|Caenorhabditis elegans transmembrane r... 105 6e-23
AC024201-2|AAK82924.1| 556|Caenorhabditis elegans Abnormal cell... 105 6e-23
AC024201-1|AAF36028.1| 558|Caenorhabditis elegans Abnormal cell... 105 6e-23
AC084197-27|AAG23467.2| 314|Caenorhabditis elegans Hypothetical... 77 2e-14
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 33 0.28
Z75543-4|CAA99871.1| 383|Caenorhabditis elegans Hypothetical pr... 33 0.37
Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical pr... 32 0.49
U32305-20|AAK18863.1| 796|Caenorhabditis elegans Worm armadillo... 31 1.1
AF013951-1|AAC47748.1| 796|Caenorhabditis elegans wrm-1 protein. 31 1.1
U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical pr... 29 4.6
AF016427-10|AAB65348.1| 301|Caenorhabditis elegans Hypothetical... 29 4.6
Z78419-7|CAC42290.1| 1601|Caenorhabditis elegans Hypothetical pr... 29 6.0
AF159144-1|AAF80368.1| 1601|Caenorhabditis elegans RRF-1 protein. 29 6.0
AF047659-5|AAC04429.1| 347|Caenorhabditis elegans Hypothetical ... 29 6.0
Z50016-15|CAA90319.1| 329|Caenorhabditis elegans Hypothetical p... 28 8.0
AL032621-9|CAA21496.1| 329|Caenorhabditis elegans Hypothetical ... 28 8.0
>U43316-1|AAC46993.1| 525|Caenorhabditis elegans transmembrane
receptor protein.
Length = 525
Score = 142 bits (345), Expect = 2e-34
Identities = 61/121 (50%), Positives = 75/121 (61%)
Frame = +1
Query: 241 CEPIKVAMCKNIGYNQTGMPNLARHTLQADADITLQTFSPLVQYGCSSQLHLFLCSVYVP 420
C+ + MC ++ YN T PNL DA ++ T+ PL+ CS QL FLCSVY P
Sbjct: 26 CQKVDHEMCNDLPYNLTSFPNLVDEESWKDASESILTYKPLLSVVCSEQLKFFLCSVYFP 85
Query: 421 MCTDKVALPIGPCRGLCDSVHARCFPVLHGFGFSWPPELDCTLFPAENNHEHMCMEGPGE 600
MC +K+A PIGPCR LC SV +C PVL FGF WP + C FP ENN E MCM+GP E
Sbjct: 86 MCNEKLANPIGPCRPLCLSVQEKCLPVLESFGFKWPDVIRCDKFPLENNREKMCMKGPNE 145
Query: 601 R 603
+
Sbjct: 146 Q 146
>AC006736-2|AAF60493.1| 529|Caenorhabditis elegans Abnormal cell
migration protein1, isoform b protein.
Length = 529
Score = 142 bits (345), Expect = 2e-34
Identities = 61/121 (50%), Positives = 75/121 (61%)
Frame = +1
Query: 241 CEPIKVAMCKNIGYNQTGMPNLARHTLQADADITLQTFSPLVQYGCSSQLHLFLCSVYVP 420
C+ + MC ++ YN T PNL DA ++ T+ PL+ CS QL FLCSVY P
Sbjct: 26 CQKVDHEMCNDLPYNLTSFPNLVDEESWKDASESILTYKPLLSVVCSEQLKFFLCSVYFP 85
Query: 421 MCTDKVALPIGPCRGLCDSVHARCFPVLHGFGFSWPPELDCTLFPAENNHEHMCMEGPGE 600
MC +K+A PIGPCR LC SV +C PVL FGF WP + C FP ENN E MCM+GP E
Sbjct: 86 MCNEKLANPIGPCRPLCLSVQEKCLPVLESFGFKWPDVIRCDKFPLENNREKMCMKGPNE 145
Query: 601 R 603
+
Sbjct: 146 Q 146
>AC006736-1|AAF60492.1| 525|Caenorhabditis elegans Abnormal cell
migration protein1, isoform a protein.
Length = 525
Score = 142 bits (345), Expect = 2e-34
Identities = 61/121 (50%), Positives = 75/121 (61%)
Frame = +1
Query: 241 CEPIKVAMCKNIGYNQTGMPNLARHTLQADADITLQTFSPLVQYGCSSQLHLFLCSVYVP 420
C+ + MC ++ YN T PNL DA ++ T+ PL+ CS QL FLCSVY P
Sbjct: 26 CQKVDHEMCNDLPYNLTSFPNLVDEESWKDASESILTYKPLLSVVCSEQLKFFLCSVYFP 85
Query: 421 MCTDKVALPIGPCRGLCDSVHARCFPVLHGFGFSWPPELDCTLFPAENNHEHMCMEGPGE 600
MC +K+A PIGPCR LC SV +C PVL FGF WP + C FP ENN E MCM+GP E
Sbjct: 86 MCNEKLANPIGPCRPLCLSVQEKCLPVLESFGFKWPDVIRCDKFPLENNREKMCMKGPNE 145
Query: 601 R 603
+
Sbjct: 146 Q 146
>Z81128-1|CAB03398.1| 568|Caenorhabditis elegans Hypothetical
protein T23D8.1 protein.
Length = 568
Score = 119 bits (287), Expect = 2e-27
Identities = 52/110 (47%), Positives = 69/110 (62%)
Frame = +1
Query: 226 ASVRTCEPIKVAMCKNIGYNQTGMPNLARHTLQADADITLQTFSPLVQYGCSSQLHLFLC 405
++ R CE I + MCKN+ YNQT PNL HT Q++A + F+PL++ CS + LFLC
Sbjct: 32 STTRKCEHITIPMCKNLDYNQTVFPNLLGHTTQSEAGPAIAQFNPLIKVKCSEDIRLFLC 91
Query: 406 SVYVPMCTDKVALPIGPCRGLCDSVHARCFPVLHGFGFSWPPELDCTLFP 555
+VY P+CT + PI PCR LC S C ++ FGF WP +LDC FP
Sbjct: 92 TVYAPVCT-VLEKPIQPCRELCLSAKNGCESLMKKFGFQWPDQLDCNKFP 140
>AF013953-1|AAC47750.1| 568|Caenorhabditis elegans mom-5 protein.
Length = 568
Score = 119 bits (287), Expect = 2e-27
Identities = 52/110 (47%), Positives = 69/110 (62%)
Frame = +1
Query: 226 ASVRTCEPIKVAMCKNIGYNQTGMPNLARHTLQADADITLQTFSPLVQYGCSSQLHLFLC 405
++ R CE I + MCKN+ YNQT PNL HT Q++A + F+PL++ CS + LFLC
Sbjct: 32 STTRKCEHITIPMCKNLDYNQTVFPNLLGHTTQSEAGPAIAQFNPLIKVKCSEDIRLFLC 91
Query: 406 SVYVPMCTDKVALPIGPCRGLCDSVHARCFPVLHGFGFSWPPELDCTLFP 555
+VY P+CT + PI PCR LC S C ++ FGF WP +LDC FP
Sbjct: 92 TVYAPVCT-VLEKPIQPCRELCLSAKNGCESLMKKFGFQWPDQLDCNKFP 140
>DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homolog
protein.
Length = 578
Score = 108 bits (259), Expect = 6e-24
Identities = 49/130 (37%), Positives = 69/130 (53%)
Frame = +1
Query: 166 MLCIIAILFTICLVPRAIAEASVRTCEPIKVAMCKNIGYNQTGMPNLARHTLQADADITL 345
ML I++LF + A+ + CE I + +CK IGYN T PN H Q +A + +
Sbjct: 1 MLLRISVLFLLLGSCGALF-GKRQKCEQITIPLCKGIGYNMTSFPNSYGHEKQEEAGLEV 59
Query: 346 QTFSPLVQYGCSSQLHLFLCSVYVPMCTDKVALPIGPCRGLCDSVHARCFPVLHGFGFSW 525
F PLV+ GC L FLC++Y P+C + PI PC LC ++C P++ +GF W
Sbjct: 60 HQFYPLVEVGCFQHLKFFLCTMYTPICQENYDKPILPCMELCVEARSKCSPIMAKYGFRW 119
Query: 526 PPELDCTLFP 555
P L C P
Sbjct: 120 PETLSCEALP 129
>AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform a protein.
Length = 578
Score = 108 bits (259), Expect = 6e-24
Identities = 49/130 (37%), Positives = 69/130 (53%)
Frame = +1
Query: 166 MLCIIAILFTICLVPRAIAEASVRTCEPIKVAMCKNIGYNQTGMPNLARHTLQADADITL 345
ML I++LF + A+ + CE I + +CK IGYN T PN H Q +A + +
Sbjct: 1 MLLRISVLFLLLGSCGALF-GKRQKCEQITIPLCKGIGYNMTSFPNSYGHEKQEEAGLEV 59
Query: 346 QTFSPLVQYGCSSQLHLFLCSVYVPMCTDKVALPIGPCRGLCDSVHARCFPVLHGFGFSW 525
F PLV+ GC L FLC++Y P+C + PI PC LC ++C P++ +GF W
Sbjct: 60 HQFYPLVEVGCFQHLKFFLCTMYTPICQENYDKPILPCMELCVEARSKCSPIMAKYGFRW 119
Query: 526 PPELDCTLFP 555
P L C P
Sbjct: 120 PETLSCEALP 129
>AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform b protein.
Length = 550
Score = 108 bits (259), Expect = 6e-24
Identities = 49/130 (37%), Positives = 69/130 (53%)
Frame = +1
Query: 166 MLCIIAILFTICLVPRAIAEASVRTCEPIKVAMCKNIGYNQTGMPNLARHTLQADADITL 345
ML I++LF + A+ + CE I + +CK IGYN T PN H Q +A + +
Sbjct: 1 MLLRISVLFLLLGSCGALF-GKRQKCEQITIPLCKGIGYNMTSFPNSYGHEKQEEAGLEV 59
Query: 346 QTFSPLVQYGCSSQLHLFLCSVYVPMCTDKVALPIGPCRGLCDSVHARCFPVLHGFGFSW 525
F PLV+ GC L FLC++Y P+C + PI PC LC ++C P++ +GF W
Sbjct: 60 HQFYPLVEVGCFQHLKFFLCTMYTPICQENYDKPILPCMELCVEARSKCSPIMAKYGFRW 119
Query: 526 PPELDCTLFP 555
P L C P
Sbjct: 120 PETLSCEALP 129
>AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein.
Length = 550
Score = 108 bits (259), Expect = 6e-24
Identities = 49/130 (37%), Positives = 69/130 (53%)
Frame = +1
Query: 166 MLCIIAILFTICLVPRAIAEASVRTCEPIKVAMCKNIGYNQTGMPNLARHTLQADADITL 345
ML I++LF + A+ + CE I + +CK IGYN T PN H Q +A + +
Sbjct: 1 MLLRISVLFLLLGSCGALF-GKRQKCEQITIPLCKGIGYNMTSFPNSYGHEKQEEAGLEV 59
Query: 346 QTFSPLVQYGCSSQLHLFLCSVYVPMCTDKVALPIGPCRGLCDSVHARCFPVLHGFGFSW 525
F PLV+ GC L FLC++Y P+C + PI PC LC ++C P++ +GF W
Sbjct: 60 HQFYPLVEVGCFQHLKFFLCTMYTPICQENYDKPILPCMELCVEARSKCSPIMAKYGFRW 119
Query: 526 PPELDCTLFP 555
P L C P
Sbjct: 120 PETLSCEALP 129
>U63557-1|AAC47301.1| 558|Caenorhabditis elegans transmembrane
receptor LIN-17 protein.
Length = 558
Score = 105 bits (251), Expect = 6e-23
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 9/209 (4%)
Frame = +1
Query: 184 ILFTICLVPRAIAEASVR-TCEPIKVAMCKNIGYNQTGMPNLARHTLQADADITLQTFSP 360
IL I L +I + +V+ C PI + +CK++ YN T PN H Q + F P
Sbjct: 8 ILLFIPLATGSIFDQAVKGKCIPIDIELCKDLPYNYTYFPNTILHNDQHTLQTHTEHFKP 67
Query: 361 LVQYGCSSQLHLFLCSVYVPMCTDKVALPIGPCRGLCDSVHARCFPVLHGFGFSWPPELD 540
L++ C +H F+CSV+ PMC + + C+ +C+ V A CF +L FG WP L+
Sbjct: 68 LMKTKCHPHIHFFICSVFAPMCPIGMPQAVTSCKSVCEQVKADCFSILEEFGIGWPEPLN 127
Query: 541 CTLFPAENNHEHMCMEGPGERAPPVGSIP-LNATGACRRLIK----PNSWVWV---RGSG 696
C FP + +CM+ + S P L G+ K P+ V V
Sbjct: 128 CAQFP---DPPELCMKPTEDEITGGFSAPRLPTKGSSSSSSKPTGCPSDLVDVDPHDPKS 184
Query: 697 RCAQFCDAEVLWETGERRAXEVWLATWAA 783
CA C + V++ T +R W +AA
Sbjct: 185 HCAFACQSNVMFSTDNKRMVRSWSIWFAA 213
>AC024201-2|AAK82924.1| 556|Caenorhabditis elegans Abnormal cell
lineage protein 17,isoform b protein.
Length = 556
Score = 105 bits (251), Expect = 6e-23
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 9/209 (4%)
Frame = +1
Query: 184 ILFTICLVPRAIAEASVR-TCEPIKVAMCKNIGYNQTGMPNLARHTLQADADITLQTFSP 360
IL I L +I + +V+ C PI + +CK++ YN T PN H Q + F P
Sbjct: 8 ILLFIPLATGSIFDQAVKGKCIPIDIELCKDLPYNYTYFPNTILHNDQHTLQTHTEHFKP 67
Query: 361 LVQYGCSSQLHLFLCSVYVPMCTDKVALPIGPCRGLCDSVHARCFPVLHGFGFSWPPELD 540
L++ C +H F+CSV+ PMC + + C+ +C+ V A CF +L FG WP L+
Sbjct: 68 LMKTKCHPHIHFFICSVFAPMCPIGMPQAVTSCKSVCEQVKADCFSILEEFGIGWPEPLN 127
Query: 541 CTLFPAENNHEHMCMEGPGERAPPVGSIP-LNATGACRRLIK----PNSWVWV---RGSG 696
C FP + +CM+ + S P L G+ K P+ V V
Sbjct: 128 CAQFP---DPPELCMKPTEDEITGGFSAPRLPTKGSSSSSSKPTGCPSDLVDVDPHDPKS 184
Query: 697 RCAQFCDAEVLWETGERRAXEVWLATWAA 783
CA C + V++ T +R W +AA
Sbjct: 185 HCAFACQSNVMFSTDNKRMVRSWSIWFAA 213
>AC024201-1|AAF36028.1| 558|Caenorhabditis elegans Abnormal cell
lineage protein 17,isoform a protein.
Length = 558
Score = 105 bits (251), Expect = 6e-23
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 9/209 (4%)
Frame = +1
Query: 184 ILFTICLVPRAIAEASVR-TCEPIKVAMCKNIGYNQTGMPNLARHTLQADADITLQTFSP 360
IL I L +I + +V+ C PI + +CK++ YN T PN H Q + F P
Sbjct: 8 ILLFIPLATGSIFDQAVKGKCIPIDIELCKDLPYNYTYFPNTILHNDQHTLQTHTEHFKP 67
Query: 361 LVQYGCSSQLHLFLCSVYVPMCTDKVALPIGPCRGLCDSVHARCFPVLHGFGFSWPPELD 540
L++ C +H F+CSV+ PMC + + C+ +C+ V A CF +L FG WP L+
Sbjct: 68 LMKTKCHPHIHFFICSVFAPMCPIGMPQAVTSCKSVCEQVKADCFSILEEFGIGWPEPLN 127
Query: 541 CTLFPAENNHEHMCMEGPGERAPPVGSIP-LNATGACRRLIK----PNSWVWV---RGSG 696
C FP + +CM+ + S P L G+ K P+ V V
Sbjct: 128 CAQFP---DPPELCMKPTEDEITGGFSAPRLPTKGSSSSSSKPTGCPSDLVDVDPHDPKS 184
Query: 697 RCAQFCDAEVLWETGERRAXEVWLATWAA 783
CA C + V++ T +R W +AA
Sbjct: 185 HCAFACQSNVMFSTDNKRMVRSWSIWFAA 213
>AC084197-27|AAG23467.2| 314|Caenorhabditis elegans Hypothetical
protein Y73B6BL.21 protein.
Length = 314
Score = 76.6 bits (180), Expect = 2e-14
Identities = 37/125 (29%), Positives = 60/125 (48%)
Frame = +1
Query: 247 PIKVAMCKNIGYNQTGMPNLARHTLQADADITLQTFSPLVQYGCSSQLHLFLCSVYVPMC 426
P +++C I Y Q +PN+ H ++A + + L++ C FLCS++ P+C
Sbjct: 41 PSNLSICNGIEYTQMRLPNILEHETVSEAIHASKDWESLLRLNCHPDTQRFLCSLFAPVC 100
Query: 427 TDKVALPIGPCRGLCDSVHARCFPVLHGFGFSWPPELDCTLFPAENNHEHMCMEGPGERA 606
++ I PC+ LC +V C + +GF WP L C F + MC++
Sbjct: 101 LMQMDRLILPCKSLCMAVKQGCENRMANYGFPWPEMLSCEKF----EDDDMCIKPMQPAK 156
Query: 607 PPVGS 621
PP GS
Sbjct: 157 PPAGS 161
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 33.1 bits (72), Expect = 0.28
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +2
Query: 338 SRCKRSVRWSSTAAPPSFICFCVR--STFPCVRIKWRCRSGPVEDCVTVCTPDVSLCFMV 511
SRC +R + P + +C C+ STF C + C VE C + PDV C V
Sbjct: 1557 SRCPYGIRTDGSGCPANGVCECINICSTFNCPQ-NMECALRRVE-CTSNPCPDVPFCVEV 1614
>Z75543-4|CAA99871.1| 383|Caenorhabditis elegans Hypothetical
protein K01D12.4 protein.
Length = 383
Score = 32.7 bits (71), Expect = 0.37
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +1
Query: 37 LRFDKPASVRDQLRSSVAPPATARAQTSTIQ*LRAFTCKQKFVMLCIIAILF 192
L+F + R+ LR++ P T RA+ LR + +FV++CII I++
Sbjct: 4 LQFARGIGQREMLRANTLPSIT-RAKVGCFARLRIYEENARFVLICIILIVY 54
>Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical
protein F47G4.4 protein.
Length = 722
Score = 32.3 bits (70), Expect = 0.49
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = -1
Query: 845 PPRSPHANCAATAAKVQAKLNAAHVASHTSXALRSPVSHRTSASQ 711
PPRSP +C T +++ +S TS +PV HR SASQ
Sbjct: 333 PPRSPGLSCEETETSASPVNSSSSHSSPTSPVKPAPVKHR-SASQ 376
>U32305-20|AAK18863.1| 796|Caenorhabditis elegans Worm armadillo
protein 1 protein.
Length = 796
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/70 (21%), Positives = 31/70 (44%)
Frame = +3
Query: 561 KQSRTHVYGGARRKSPTGREYPVERHGCV*EINQTKQLGVG*RIRPLRPVL*CRSPVGNW 740
+++ T V + + PT R+YP+ + + T+ + IR L P++ + W
Sbjct: 146 QRALTRVSQVSENQDPTNRQYPMTAPEIIENLESTELINQAAAIRALEPIVKAGGMLQTW 205
Query: 741 GTQSGRSMAR 770
G + + R
Sbjct: 206 GPKGAEPIIR 215
>AF013951-1|AAC47748.1| 796|Caenorhabditis elegans wrm-1 protein.
Length = 796
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/70 (21%), Positives = 31/70 (44%)
Frame = +3
Query: 561 KQSRTHVYGGARRKSPTGREYPVERHGCV*EINQTKQLGVG*RIRPLRPVL*CRSPVGNW 740
+++ T V + + PT R+YP+ + + T+ + IR L P++ + W
Sbjct: 146 QRALTRVSQVSENQDPTNRQYPMTAPEIIENLESTELINQAAAIRALEPIVKAGGMLQTW 205
Query: 741 GTQSGRSMAR 770
G + + R
Sbjct: 206 GPKGAEPIIR 215
>U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical
protein F53B3.2 protein.
Length = 634
Score = 29.1 bits (62), Expect = 4.6
Identities = 22/92 (23%), Positives = 34/92 (36%)
Frame = +2
Query: 308 PGTPCKLMPISRCKRSVRWSSTAAPPSFICFCVRSTFPCVRIKWRCRSGPVEDCVTVCTP 487
P T L+P + +SSTA P FI + T P + K S P + C P
Sbjct: 338 PSTITMLIPTPPSEYQTVYSSTAGIP-FIIKAKKFTRPPIVEKIAVTSAPHTNKYDTCVP 396
Query: 488 DVSLCFMVSDFLGPRS*IAHCFQRKTITNTCV 583
D + F +C+ T+ + +
Sbjct: 397 DQRCSIKLKSFETSDPLFQYCYSHSTMIDNSI 428
>AF016427-10|AAB65348.1| 301|Caenorhabditis elegans Hypothetical
protein F32D1.7 protein.
Length = 301
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 215 PSPRPP-CGRANPLKWQCARTSATTRPVCRTWPGTPCKLMPISRCK 349
P PRPP G NP TS T+ P T +P + IS+ K
Sbjct: 188 PPPRPPPAGHQNPFLGNQPSTSNTSEPSTSTQGVSPSRTSKISKKK 233
>Z78419-7|CAC42290.1| 1601|Caenorhabditis elegans Hypothetical protein
F26A3.8 protein.
Length = 1601
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 208 PRAIAEASVRTCEPIKVAMCKNIGYNQTGMPNLARHTLQADADITLQTFSPL 363
P AE R CEP + + +NI N + N+ +HT + + Q +P+
Sbjct: 1489 PTITAETMDRECEPFVIELPENINVNDL-INNMKKHTNVSTVKMRRQEKNPI 1539
>AF159144-1|AAF80368.1| 1601|Caenorhabditis elegans RRF-1 protein.
Length = 1601
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 208 PRAIAEASVRTCEPIKVAMCKNIGYNQTGMPNLARHTLQADADITLQTFSPL 363
P AE R CEP + + +NI N + N+ +HT + + Q +P+
Sbjct: 1489 PTITAETMDRECEPFVIELPENINVNDL-INNMKKHTNVSTVKMRRQEKNPI 1539
>AF047659-5|AAC04429.1| 347|Caenorhabditis elegans Hypothetical
protein K07H8.8 protein.
Length = 347
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 151 KQKFVMLCIIAILFTICLVPRAIAEASVRTCEPIKVAMCKNIGYNQTGMP 300
K V++ I +I F+I + E + C + +A C NI +NQT +P
Sbjct: 52 KAVLVVMGIFSICFSIDKYQILMKEIESKECNDV-LAECNNIPFNQTFVP 100
>Z50016-15|CAA90319.1| 329|Caenorhabditis elegans Hypothetical
protein Y45F3A.1 protein.
Length = 329
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 199 CLVPRAIAEASVRTCEPIKVAMCKNIGYNQTGMPNLARHTLQADADITLQT 351
C + + E VRT K AMCK IG+ + N + + A +TL++
Sbjct: 102 CQLKVLLNEIIVRTSFNEK-AMCKEIGHQEAEFENRLKEVISGRAQLTLKS 151
>AL032621-9|CAA21496.1| 329|Caenorhabditis elegans Hypothetical
protein Y45F3A.1 protein.
Length = 329
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 199 CLVPRAIAEASVRTCEPIKVAMCKNIGYNQTGMPNLARHTLQADADITLQT 351
C + + E VRT K AMCK IG+ + N + + A +TL++
Sbjct: 102 CQLKVLLNEIIVRTSFNEK-AMCKEIGHQEAEFENRLKEVISGRAQLTLKS 151
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,352,648
Number of Sequences: 27780
Number of extensions: 586806
Number of successful extensions: 1542
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1536
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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