BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_P21
(1076 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-1714|AAS64673.2| 1701|Drosophila melanogaster CG33300-P... 30 6.3
>AE014134-1714|AAS64673.2| 1701|Drosophila melanogaster CG33300-PA
protein.
Length = 1701
Score = 29.9 bits (64), Expect = 6.3
Identities = 28/133 (21%), Positives = 42/133 (31%), Gaps = 3/133 (2%)
Frame = +1
Query: 685 QPXQTXXKPXTKXPKTQXHQXXKHKTTQNPXXKPXTXAQKTH--TPQPKXXQXHTXQKXH 858
+P + T KT K KTT+ +P T TH T +P + T + H
Sbjct: 764 KPTEEPTTRKTSTTKTTREPTTKRKTTERTTKEPTTRKTTTHKTTEEPTTNKTTTKKTTH 823
Query: 859 -XKKQXXXXXXXXXXXXXXXXXXXXXTQXPXXXKKNQXXKTNHNXXPHTXTHTTTXXXPE 1035
+ T+ P ++ T T TH TT P
Sbjct: 824 EPTTKKSTTLKPTEEPTTRKTSTTKTTREPTTKRETTERTTQEPSTSKTTTHETT-AEPA 882
Query: 1036 TAXXRHTXKTERT 1074
T H T+++
Sbjct: 883 TKKTTHEPTTQKS 895
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.309 0.121 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,267,234
Number of Sequences: 53049
Number of extensions: 100838
Number of successful extensions: 213
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 212
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5555913888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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