Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_P14
         (888 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    25   2.3  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   5.4  
AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450 CY...    23   9.4  

>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 115 LLPILKQNNGSQRMQRFGRRSNNSHLCVLV 204
           LL I +  N ++R   FGR +N    C++V
Sbjct: 541 LLAIQQVVNAARRAMSFGRTNNRDRRCLMV 570


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 184  YYYFFVQIVAFFDFHYFVSR*VVSIERYQNE 92
            YY  ++ I+AFF  + FV   +V+   +QNE
Sbjct: 1101 YYIIYIIIIAFFMVNIFVGFVIVT---FQNE 1128


>AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450
           CYP6S2 protein.
          Length = 504

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 172 FVQIVAFFDFHYFVSR*VVSIERY 101
           F + V   DF+YFV R V S E +
Sbjct: 89  FARTVMVKDFNYFVDRGVYSNEEF 112


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 784,989
Number of Sequences: 2352
Number of extensions: 16031
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)