Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_P14
         (888 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y08968-1|CAA70165.1|  111|Drosophila melanogaster Tctex protein ...    92   8e-19
AY069608-1|AAL39753.1|  111|Drosophila melanogaster LD36705p pro...    92   8e-19
AF123058-1|AAD30033.1|  111|Drosophila melanogaster dynein light...    92   8e-19
AE014297-2495|AAF55532.1|  111|Drosophila melanogaster CG12363-P...    92   8e-19
AY113461-1|AAM29466.1|  173|Drosophila melanogaster RE37471p pro...    31   1.6  
AJ863565-1|CAI10732.1|  173|Drosophila melanogaster dynein light...    31   1.6  
AE014297-1064|AAF54474.1|  173|Drosophila melanogaster CG5359-PA...    31   1.6  

>Y08968-1|CAA70165.1|  111|Drosophila melanogaster Tctex protein
           protein.
          Length = 111

 Score = 92.3 bits (219), Expect = 8e-19
 Identities = 38/45 (84%), Positives = 42/45 (93%)
 Frame = +2

Query: 407 ILTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 541
           I+T  I+QKNGAGLHT+SSCYW+N TDGSCTVRWENKTMYCIVSV
Sbjct: 62  IVTAMIMQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSV 106



 Score = 67.7 bits (158), Expect = 2e-11
 Identities = 31/55 (56%), Positives = 35/55 (63%)
 Frame = +3

Query: 246 QNQFIVDDVXXXXXXXXXXXXGGTAYQHNNVNQWTSAVVESCLGQLTKLQKPYKY 410
           ++QFIVDDV            GG AYQH+ VN WT  VVE+CL  LTK QKPYKY
Sbjct: 7   ESQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKY 61


>AY069608-1|AAL39753.1|  111|Drosophila melanogaster LD36705p
           protein.
          Length = 111

 Score = 92.3 bits (219), Expect = 8e-19
 Identities = 38/45 (84%), Positives = 42/45 (93%)
 Frame = +2

Query: 407 ILTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 541
           I+T  I+QKNGAGLHT+SSCYW+N TDGSCTVRWENKTMYCIVSV
Sbjct: 62  IVTAMIMQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSV 106



 Score = 67.7 bits (158), Expect = 2e-11
 Identities = 31/55 (56%), Positives = 35/55 (63%)
 Frame = +3

Query: 246 QNQFIVDDVXXXXXXXXXXXXGGTAYQHNNVNQWTSAVVESCLGQLTKLQKPYKY 410
           ++QFIVDDV            GG AYQH+ VN WT  VVE+CL  LTK QKPYKY
Sbjct: 7   ESQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKY 61


>AF123058-1|AAD30033.1|  111|Drosophila melanogaster dynein light
           chain subunit protein.
          Length = 111

 Score = 92.3 bits (219), Expect = 8e-19
 Identities = 38/45 (84%), Positives = 42/45 (93%)
 Frame = +2

Query: 407 ILTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 541
           I+T  I+QKNGAGLHT+SSCYW+N TDGSCTVRWENKTMYCIVSV
Sbjct: 62  IVTAMIMQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSV 106



 Score = 67.7 bits (158), Expect = 2e-11
 Identities = 31/55 (56%), Positives = 35/55 (63%)
 Frame = +3

Query: 246 QNQFIVDDVXXXXXXXXXXXXGGTAYQHNNVNQWTSAVVESCLGQLTKLQKPYKY 410
           ++QFIVDDV            GG AYQH+ VN WT  VVE+CL  LTK QKPYKY
Sbjct: 7   ESQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKY 61


>AE014297-2495|AAF55532.1|  111|Drosophila melanogaster CG12363-PA
           protein.
          Length = 111

 Score = 92.3 bits (219), Expect = 8e-19
 Identities = 38/45 (84%), Positives = 42/45 (93%)
 Frame = +2

Query: 407 ILTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 541
           I+T  I+QKNGAGLHT+SSCYW+N TDGSCTVRWENKTMYCIVSV
Sbjct: 62  IVTAMIMQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSV 106



 Score = 67.7 bits (158), Expect = 2e-11
 Identities = 31/55 (56%), Positives = 35/55 (63%)
 Frame = +3

Query: 246 QNQFIVDDVXXXXXXXXXXXXGGTAYQHNNVNQWTSAVVESCLGQLTKLQKPYKY 410
           ++QFIVDDV            GG AYQH+ VN WT  VVE+CL  LTK QKPYKY
Sbjct: 7   ESQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKY 61


>AY113461-1|AAM29466.1|  173|Drosophila melanogaster RE37471p
           protein.
          Length = 173

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +2

Query: 428 QKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 541
           Q+ GAG   +S C WD   D S +  + N +++C+ +V
Sbjct: 130 QELGAGATYNSRCCWDCDCDTSVSEVFSNTSLFCVCTV 167


>AJ863565-1|CAI10732.1|  173|Drosophila melanogaster dynein light
           chain protein.
          Length = 173

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +2

Query: 428 QKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 541
           Q+ GAG   +S C WD   D S +  + N +++C+ +V
Sbjct: 130 QELGAGATYNSRCCWDCDCDTSVSEVFSNTSLFCVCTV 167


>AE014297-1064|AAF54474.1|  173|Drosophila melanogaster CG5359-PA
           protein.
          Length = 173

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +2

Query: 428 QKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 541
           Q+ GAG   +S C WD   D S +  + N +++C+ +V
Sbjct: 130 QELGAGATYNSRCCWDCDCDTSVSEVFSNTSLFCVCTV 167


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,106,305
Number of Sequences: 53049
Number of extensions: 628066
Number of successful extensions: 1167
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)