Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_P14
         (888 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71259-5|CAA95796.1|  106|Caenorhabditis elegans Hypothetical pr...    45   8e-05
U40938-8|AAA81699.1|  123|Caenorhabditis elegans Hypothetical pr...    32   0.48 

>Z71259-5|CAA95796.1|  106|Caenorhabditis elegans Hypothetical
           protein F13G3.4 protein.
          Length = 106

 Score = 44.8 bits (101), Expect = 8e-05
 Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = +2

Query: 407 ILTCTILQ-KNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 541
           ++T + LQ  +G+GL+ S+  YW+  TD S   RWE KTM  IV V
Sbjct: 56  VVTSSFLQISSGSGLNVSTISYWNKVTDSSYMYRWEAKTMLAIVYV 101



 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 315 TAYQHNNVNQWTSAVVESCLGQLTKLQKPYKY 410
           T Y H +  QW    VE    +L    KPYKY
Sbjct: 24  TQYTHKDSVQWNQKAVEQITKKLVAAGKPYKY 55


>U40938-8|AAA81699.1|  123|Caenorhabditis elegans Hypothetical
           protein D1009.5 protein.
          Length = 123

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +2

Query: 407 ILTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 541
           ++   I ++ G G  T+  C WD   DG  T R+   +++C V V
Sbjct: 73  VIQTMIAEQCGNGATTAVQCVWDEDCDGYLTQRYVTGSIWCEVLV 117


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,113,848
Number of Sequences: 27780
Number of extensions: 350022
Number of successful extensions: 734
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)