Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_P11
(900 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P40320 Cluster: S-adenosylmethionine synthetase; n=19; ... 315 1e-84
UniRef50_Q00266 Cluster: S-adenosylmethionine synthetase isoform... 268 1e-70
UniRef50_Q8MU02 Cluster: Putative S-adenosylmethionine synthetas... 241 2e-62
UniRef50_P19358 Cluster: S-adenosylmethionine synthetase 2; n=65... 233 5e-60
UniRef50_Q29NR2 Cluster: GA15421-PA; n=3; Bilateria|Rep: GA15421... 231 2e-59
UniRef50_Q837P9 Cluster: S-adenosylmethionine synthetase; n=45; ... 182 1e-44
UniRef50_A7APP7 Cluster: S-adenosylmethionine synthetase, putati... 180 6e-44
UniRef50_Q9K7Q9 Cluster: S-adenosylmethionine synthetase; n=65; ... 178 2e-43
UniRef50_P0A820 Cluster: S-adenosylmethionine synthetase; n=23; ... 176 5e-43
UniRef50_P72871 Cluster: S-adenosylmethionine synthetase; n=119;... 171 3e-41
UniRef50_A4QEH8 Cluster: Putative uncharacterized protein; n=1; ... 158 2e-37
UniRef50_Q650L4 Cluster: S-adenosylmethionine synthetase; n=19; ... 155 1e-36
UniRef50_A7NSM8 Cluster: Chromosome chr18 scaffold_1, whole geno... 148 2e-34
UniRef50_Q1GND0 Cluster: S-adenosylmethionine synthetase; n=29; ... 137 4e-31
UniRef50_Q2U8T6 Cluster: S-adenosylmethionine synthetase; n=2; A... 136 7e-31
UniRef50_Q7QWJ4 Cluster: S-adenosylmethionine synthetase; n=1; G... 136 9e-31
UniRef50_Q4A5F4 Cluster: S-adenosylmethionine synthetase; n=4; B... 132 9e-30
UniRef50_Q661P3 Cluster: S-adenosylmethionine synthetase; n=3; B... 129 8e-29
UniRef50_Q7NB16 Cluster: S-adenosylmethionine synthetase; n=2; M... 127 3e-28
UniRef50_Q6KHY1 Cluster: S-adenosylmethionine synthetase; n=7; M... 122 2e-26
UniRef50_Q5FGR4 Cluster: S-adenosylmethionine synthetase; n=13; ... 118 2e-25
UniRef50_A6BGC6 Cluster: S-adenosylmethionine synthetase; n=1; D... 118 3e-25
UniRef50_UPI00015BD1C2 Cluster: UPI00015BD1C2 related cluster; n... 115 2e-24
UniRef50_Q2GDS4 Cluster: S-adenosylmethionine synthetase; n=1; N... 111 3e-23
UniRef50_Q6SZ22 Cluster: S-adenosylmethionine synthetase; n=4; S... 109 9e-23
UniRef50_P78003 Cluster: S-adenosylmethionine synthetase; n=4; M... 107 5e-22
UniRef50_O09486 Cluster: S-adenosylmethionine synthetase; n=1; A... 107 5e-22
UniRef50_A6QA94 Cluster: S-adenosylmethionine synthetase; n=20; ... 103 8e-21
UniRef50_Q2LSR0 Cluster: S-adenosylmethionine synthetase; n=1; S... 92 2e-17
UniRef50_Q60BL6 Cluster: S-adenosylmethionine synthetase; n=6; B... 91 4e-17
UniRef50_Q6A7D8 Cluster: S-adenosylmethionine synthetase; n=11; ... 83 7e-15
UniRef50_A6PKG8 Cluster: Methionine adenosyltransferase precurso... 83 7e-15
UniRef50_Q1VNA9 Cluster: S-adenosylmethionine synthetase; n=1; P... 71 3e-11
UniRef50_Q7R6Z1 Cluster: Putative uncharacterized protein PY0779... 62 2e-08
UniRef50_A5AMB5 Cluster: Putative uncharacterized protein; n=1; ... 50 1e-04
UniRef50_Q027Y1 Cluster: Methionine adenosyltransferase; n=1; So... 48 2e-04
UniRef50_A7Q4X0 Cluster: Chromosome undetermined scaffold_51, wh... 44 0.007
UniRef50_Q95QX7 Cluster: Putative uncharacterized protein; n=1; ... 42 0.016
UniRef50_A4DEX8 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_Q5BYJ5 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_Q4S5S5 Cluster: Chromosome 9 SCAF14729, whole genome sh... 34 4.3
UniRef50_UPI0000F1FBF8 Cluster: PREDICTED: hypothetical protein;... 34 5.7
UniRef50_UPI00006A2011 Cluster: Tumor necrosis factor receptor s... 34 5.7
UniRef50_Q15TP8 Cluster: Adenosine deaminase; n=2; Gammaproteoba... 34 5.7
UniRef50_Q8TC07 Cluster: TBC1 domain family member 15; n=39; Eut... 34 5.7
UniRef50_Q22516 Cluster: Chromodomain-helicase-DNA-binding prote... 34 5.7
UniRef50_Q8FXU7 Cluster: Protease, putative; n=6; Brucellaceae|R... 33 7.5
UniRef50_Q82ZM8 Cluster: Polysaccharide lyase, family 8; n=1; En... 33 9.9
>UniRef50_P40320 Cluster: S-adenosylmethionine synthetase; n=19;
Eukaryota|Rep: S-adenosylmethionine synthetase -
Drosophila melanogaster (Fruit fly)
Length = 408
Score = 315 bits (773), Expect = 1e-84
Identities = 156/234 (66%), Positives = 178/234 (76%)
Frame = +2
Query: 146 NGYAKTNGHSYDMEDGSVFLFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETI 325
NG +NG+SYDMEDG+ FLFTSES GEGHPDKMCDQISDAILDAHL QDP+A ACET+
Sbjct: 11 NGCNGSNGNSYDMEDGATFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACETV 70
Query: 326 TKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAA 505
KTGM+LLCGEITSKA VDYQKVVRETV+HIGYDDSSKGFD+KTC+V+LALDQQSP IAA
Sbjct: 71 AKTGMILLCGEITSKAVVDYQKVVRETVQHIGYDDSSKGFDFKTCNVLLALDQQSPEIAA 130
Query: 506 GVHENRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRAKWRILVGKTR 685
GVH NR +EE+GAGDQG+MFGYATDETEECMPLTVVLAHKLN+KIAELR +
Sbjct: 131 GVHVNRAEEEIGAGDQGIMFGYATDETEECMPLTVVLAHKLNEKIAELRRSDVFWWARPD 190
Query: 686 FKNTGYLRICICWWCNSPTESSYCSRVTCNTLKKITLXTLRDEIREKVIXXGYP 847
K P + + V+ +KI+L TLR E+ EKV+ P
Sbjct: 191 SKTQVTCEYLFNQGSAVP-KRVHTIVVSMQHSEKISLETLRSEVMEKVVKVVIP 243
Score = 75.8 bits (178), Expect = 1e-12
Identities = 37/88 (42%), Positives = 51/88 (57%)
Frame = +3
Query: 636 KLQSSGRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVSLATL*KRLPXRPCEMR 815
K+ R+ FWWARPDSKTQVTCEY+F G+ VP+RVHT+VVS+ +++
Sbjct: 174 KIAELRRSDVFWWARPDSKTQVTCEYLFNQGSAVPKRVHTIVVSMQHS-EKISLETLRSE 232
Query: 816 SEKRSSXXVILXXYLDXRXVXXIXPXGL 899
++ VI Y+D + I P GL
Sbjct: 233 VMEKVVKVVIPAKYIDANTIVHINPCGL 260
>UniRef50_Q00266 Cluster: S-adenosylmethionine synthetase isoform
type-1; n=171; cellular organisms|Rep:
S-adenosylmethionine synthetase isoform type-1 - Homo
sapiens (Human)
Length = 395
Score = 268 bits (657), Expect = 1e-70
Identities = 119/159 (74%), Positives = 145/159 (91%)
Frame = +2
Query: 176 YDMEDGSVFLFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCG 355
+ + +G VF+FTSES GEGHPDK+CDQISDA+LDAHL QDP+A ACET+ KTGMVLLCG
Sbjct: 11 HSLSEG-VFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCG 69
Query: 356 EITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEE 535
EITS A VDYQ+VVR+T+KHIGYDDS+KGFD+KTC+V++AL+QQSP+IA VH +RN+E+
Sbjct: 70 EITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEED 129
Query: 536 VGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELR 652
VGAGDQGLMFGYATDETEECMPLT++LAHKLN ++A+LR
Sbjct: 130 VGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLR 168
Score = 53.2 bits (122), Expect = 9e-06
Identities = 28/81 (34%), Positives = 43/81 (53%)
Frame = +3
Query: 654 RNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVSLATL*KRLPXRPCEMRSEKRSS 833
R+G W RPDSKTQVT +Y+ GA +P R+HT+V+S+ + + +++
Sbjct: 169 RSGLLPWLRPDSKTQVTVQYMQDNGAVIPVRIHTIVISVQHN-EDITLEEMRRALKEQVI 227
Query: 834 XXVILXXYLDXRXVXXIXPXG 896
V+ YLD V + P G
Sbjct: 228 RAVVPAKYLDEDTVYHLQPSG 248
>UniRef50_Q8MU02 Cluster: Putative S-adenosylmethionine synthetase;
n=1; Heterodera glycines|Rep: Putative
S-adenosylmethionine synthetase - Heterodera glycines
(Soybean cyst nematode worm)
Length = 211
Score = 241 bits (590), Expect = 2e-62
Identities = 111/156 (71%), Positives = 129/156 (82%)
Frame = +2
Query: 185 EDGSVFLFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEIT 364
E FLFTSES GEGHPDKMCDQISDAILDAHL DP A ACE +TKTGMVL+CGE T
Sbjct: 50 EQVGTFLFTSESVGEGHPDKMCDQISDAILDAHLALDPAAKVACEVVTKTGMVLVCGETT 109
Query: 365 SKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGA 544
S A VDYQ VVRET+K IGYDDSSKGF+YKTC+V++AL++QSP IAAGVHE++ E+VGA
Sbjct: 110 SSATVDYQSVVRETIKKIGYDDSSKGFNYKTCNVLVALEKQSPEIAAGVHEDKEPEDVGA 169
Query: 545 GDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELR 652
DQG+MF Y +DE+ E MPLT+VL+HKLN K +LR
Sbjct: 170 RDQGIMFXYPSDESPEAMPLTLVLSHKLNAKYHQLR 205
>UniRef50_P19358 Cluster: S-adenosylmethionine synthetase 2; n=659;
cellular organisms|Rep: S-adenosylmethionine synthetase
2 - Saccharomyces cerevisiae (Baker's yeast)
Length = 384
Score = 233 bits (570), Expect = 5e-60
Identities = 102/157 (64%), Positives = 132/157 (84%)
Frame = +2
Query: 182 MEDGSVFLFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEI 361
M FLFTSES GEGHPDK+CDQ+SDAILDA L QDP + ACET KTGM+++ GEI
Sbjct: 1 MSKSKTFLFTSESVGEGHPDKICDQVSDAILDACLEQDPFSKVACETAAKTGMIMVFGEI 60
Query: 362 TSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVG 541
T+KA +DYQ++VR+T+K IGYDDS+KGFDYKTC+V++A++QQSP+IA G+H ++ E++G
Sbjct: 61 TTKARLDYQQIVRDTIKKIGYDDSAKGFDYKTCNVLVAIEQQSPDIAQGLHYEKSLEDLG 120
Query: 542 AGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELR 652
AGDQG+MFGYATDET E +PLT++LAHKLN +A+ R
Sbjct: 121 AGDQGIMFGYATDETPEGLPLTILLAHKLNMAMADAR 157
Score = 47.2 bits (107), Expect = 6e-04
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +3
Query: 654 RNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 767
R+G W RPD+KTQVT EY G VP+R+ TVV+S
Sbjct: 158 RDGSLPWLRPDTKTQVTVEYEDDNGRWVPKRIDTVVIS 195
>UniRef50_Q29NR2 Cluster: GA15421-PA; n=3; Bilateria|Rep: GA15421-PA
- Drosophila pseudoobscura (Fruit fly)
Length = 200
Score = 231 bits (565), Expect = 2e-59
Identities = 106/144 (73%), Positives = 124/144 (86%)
Frame = +2
Query: 146 NGYAKTNGHSYDMEDGSVFLFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETI 325
NG +NG+SYDMEDG FLFTSES GEGHPDKMCDQISDAILDAHL QDP+A ACET+
Sbjct: 11 NGCNGSNGNSYDMEDGQTFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACETV 70
Query: 326 TKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAA 505
KTGM+LLCGEITSKA VDYQKVVRETV+HIGYDDSSKGFD+KT ++++A++QQSP+IA
Sbjct: 71 AKTGMILLCGEITSKAVVDYQKVVRETVQHIGYDDSSKGFDWKTLNLLVAIEQQSPDIAN 130
Query: 506 GVHENRNDEEVGAGDQGLMFGYAT 577
GVH NR +++VGAGDQ + AT
Sbjct: 131 GVHINREEDDVGAGDQVSILKRAT 154
Score = 36.3 bits (80), Expect = 1.1
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = +3
Query: 474 H*TNNHQTLLLGCMRTEMTRKLGQETRA*CSVMQQMRQKNAC 599
H TNN LLL CM + +K E R C M MRQ N C
Sbjct: 158 HWTNNLPKLLLACMSIALRKKSVPEIRESCLDMLPMRQMNVC 199
>UniRef50_Q837P9 Cluster: S-adenosylmethionine synthetase; n=45;
cellular organisms|Rep: S-adenosylmethionine synthetase
- Enterococcus faecalis (Streptococcus faecalis)
Length = 394
Score = 182 bits (442), Expect = 1e-44
Identities = 91/156 (58%), Positives = 118/156 (75%), Gaps = 6/156 (3%)
Frame = +2
Query: 203 LFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKANVD 382
LFTSES EGHPDK+ DQ+SDAILDA L +DP A ACET TG+VL+ GEI++ A VD
Sbjct: 6 LFTSESVSEGHPDKVADQVSDAILDAILEKDPMARVACETSVTTGLVLVFGEISTTAYVD 65
Query: 383 YQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVH---ENRNDEE---VGA 544
QK+VR+TVK IGY + GFD +T +V++A+D+QSP+IA GV E R+ +E +GA
Sbjct: 66 IQKIVRQTVKDIGYTRAKYGFDGETVAVLVAIDEQSPDIAQGVDAALEVRDQDEKDDIGA 125
Query: 545 GDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELR 652
GDQGLMFG+A DET E MPL + L+H+L +++AELR
Sbjct: 126 GDQGLMFGFAVDETPELMPLPIALSHRLVRRLAELR 161
Score = 34.3 bits (75), Expect = 4.3
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +3
Query: 630 IRKLQSSGRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 767
+R+L + + RPD+K+QVT EY G PQRV T+V+S
Sbjct: 154 VRRLAELRKEKVLPYLRPDAKSQVTVEYDDQG---QPQRVDTIVIS 196
>UniRef50_A7APP7 Cluster: S-adenosylmethionine synthetase, putative;
n=1; Babesia bovis|Rep: S-adenosylmethionine synthetase,
putative - Babesia bovis
Length = 416
Score = 180 bits (437), Expect = 6e-44
Identities = 100/227 (44%), Positives = 138/227 (60%), Gaps = 4/227 (1%)
Frame = +2
Query: 179 DMEDGSVFLFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGE 358
D D + FLFTSES EGHPDK+CDQISDAILDA L QDP++ ACE +V++ GE
Sbjct: 7 DTVDKNNFLFTSESVNEGHPDKICDQISDAILDACLRQDPESKVACEVCAIKNLVMVFGE 66
Query: 359 ITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEV 538
IT+ A VDYQ VVR+ + IGY + GFD T +M+ L QQ+P IA+ VH R EE
Sbjct: 67 ITTNAVVDYQAVVRQVLTDIGYTSNELGFDASTVEIMVRLAQQAPEIASAVHLGRKLEET 126
Query: 539 GAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRAKWRILVGKTRFKNTGYLRICI 718
AGDQG+MFGYA+DET E MPL+ LA +L +++ ++R K +++ + G +I +
Sbjct: 127 AAGDQGIMFGYASDETPELMPLSHALATRLGKRLTKVR-KTKVM---PYLRPDGKTQITV 182
Query: 719 CWWC--NSPTESSYCSRVTCNTL--KKITLXTLRDEIREKVIXXGYP 847
+ N E V +T ++L TLR+++ E V+ P
Sbjct: 183 EYRVEPNGHLEPVRVHTVLISTQHDPDVSLDTLREDLMEHVVKPTVP 229
Score = 37.1 bits (82), Expect = 0.61
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 672 WARPDSKTQVTCEY-VFAGGATVPQRVHTVVVS 767
+ RPD KTQ+T EY V G P RVHTV++S
Sbjct: 171 YLRPDGKTQITVEYRVEPNGHLEPVRVHTVLIS 203
>UniRef50_Q9K7Q9 Cluster: S-adenosylmethionine synthetase; n=65;
cellular organisms|Rep: S-adenosylmethionine synthetase
- Bacillus halodurans
Length = 399
Score = 178 bits (433), Expect = 2e-43
Identities = 86/160 (53%), Positives = 116/160 (72%), Gaps = 10/160 (6%)
Frame = +2
Query: 203 LFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKANVD 382
LFTSES EGHPDK+CDQISD+ILD L +DP+A ACET TG+VL+ GEIT+ VD
Sbjct: 9 LFTSESVTEGHPDKICDQISDSILDEILKEDPNARVACETSVTTGLVLVAGEITTSTYVD 68
Query: 383 YQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE----------NRNDE 532
KVVR+T+++IGY + GFD +TC+V+ ++D+QSP+IA GV++ + E
Sbjct: 69 IPKVVRDTIRNIGYTRAKYGFDSETCAVLTSIDEQSPDIAQGVNQALEAREGQMTDAEIE 128
Query: 533 EVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELR 652
+GAGDQGLMFGYA +ET E MPL + L+HKL ++++E R
Sbjct: 129 AIGAGDQGLMFGYANNETPELMPLPISLSHKLARRLSEAR 168
>UniRef50_P0A820 Cluster: S-adenosylmethionine synthetase; n=23;
Proteobacteria|Rep: S-adenosylmethionine synthetase -
Shigella flexneri
Length = 384
Score = 176 bits (429), Expect = 5e-43
Identities = 87/150 (58%), Positives = 109/150 (72%)
Frame = +2
Query: 203 LFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKANVD 382
LFTSES EGHPDK+ DQISDA+LDA L QDP A ACET KTGMVL+ GEIT+ A VD
Sbjct: 5 LFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVD 64
Query: 383 YQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLM 562
+++ R TV+ IGY S GFD +C+V+ A+ +QSP+I GV + + E GAGDQGLM
Sbjct: 65 IEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV-DRADPLEQGAGDQGLM 123
Query: 563 FGYATDETEECMPLTVVLAHKLNQKIAELR 652
FGYAT+ET+ MP + AH+L Q+ AE+R
Sbjct: 124 FGYATNETDVLMPAPITYAHRLVQRQAEVR 153
>UniRef50_P72871 Cluster: S-adenosylmethionine synthetase; n=119;
Bacteria|Rep: S-adenosylmethionine synthetase -
Synechocystis sp. (strain PCC 6803)
Length = 426
Score = 171 bits (415), Expect = 3e-41
Identities = 80/160 (50%), Positives = 117/160 (73%), Gaps = 9/160 (5%)
Frame = +2
Query: 200 FLFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKANV 379
+LFTSES EGHPDK+CDQISD ILDA L DP++ A ET+ TG+ L+ GEITS+A++
Sbjct: 11 YLFTSESVTEGHPDKVCDQISDTILDALLTLDPNSRVAAETVVNTGLTLVTGEITSQAHI 70
Query: 380 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGV-------HENRNDE-- 532
++ +++R+ + IGY ++ G+ +C+VMLA+D+QSP+I+ GV H +DE
Sbjct: 71 NFVELIRQKIAEIGYTNADNGYSANSCAVMLAIDEQSPDISQGVTAAQEQRHALSDDELD 130
Query: 533 EVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELR 652
++GAGDQGLMFGYA +ET E MPL + LAH++ +++E+R
Sbjct: 131 KIGAGDQGLMFGYACNETPELMPLPISLAHRIALRLSEVR 170
>UniRef50_A4QEH8 Cluster: Putative uncharacterized protein; n=1;
Corynebacterium glutamicum R|Rep: Putative
uncharacterized protein - Corynebacterium glutamicum
(strain R)
Length = 257
Score = 158 bits (384), Expect = 2e-37
Identities = 78/162 (48%), Positives = 109/162 (67%), Gaps = 9/162 (5%)
Frame = +2
Query: 194 SVFLFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKA 373
+V LFTSES EGHPDK+CD ISD ILDA L +DP + A ET+ TG+V + GE+ + A
Sbjct: 6 AVRLFTSESVTEGHPDKICDAISDTILDALLEKDPQSRVAVETVVTTGIVHVVGEVRTSA 65
Query: 374 NVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN---------RN 526
V+ ++VR + IG++ S GFD +TC V +++ +QS IA GV +
Sbjct: 66 YVEIPQLVRNKLIEIGFNSSEVGFDGRTCGVSVSIGEQSQEIADGVDNSDEARTNGDVEE 125
Query: 527 DEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELR 652
D+ GAGDQGLMFGYAT+ETEE MPL + LAH+L++++ ++R
Sbjct: 126 DDRAGAGDQGLMFGYATNETEEYMPLPIALAHRLSRRLTQVR 167
>UniRef50_Q650L4 Cluster: S-adenosylmethionine synthetase; n=19;
cellular organisms|Rep: S-adenosylmethionine synthetase
- Bacteroides fragilis
Length = 430
Score = 155 bits (377), Expect = 1e-36
Identities = 75/151 (49%), Positives = 102/151 (67%)
Frame = +2
Query: 200 FLFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKANV 379
+LFTSES EGHPDK+ DQISDA+LD L DP + ACET+ TG V+L GE+ + A V
Sbjct: 3 YLFTSESVSEGHPDKVADQISDAVLDKLLAYDPSSKVACETLVTTGQVVLAGEVKTGAYV 62
Query: 380 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 559
D Q + RE ++ IGY F+ +C V+ A+ +QS +I GV E + GAGDQG+
Sbjct: 63 DLQLIAREVIQKIGYTKGEYMFESNSCGVLSAIHEQSADINRGV-EREDPMNQGAGDQGM 121
Query: 560 MFGYATDETEECMPLTVVLAHKLNQKIAELR 652
MFGYAT+ETE MPL++ LAH++ +A++R
Sbjct: 122 MFGYATNETENYMPLSLDLAHRILLVLADIR 152
>UniRef50_A7NSM8 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 509
Score = 148 bits (359), Expect = 2e-34
Identities = 74/150 (49%), Positives = 101/150 (67%)
Frame = +2
Query: 203 LFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKANVD 382
L+ E GH ++ ISDA+LDA L QDPD+ ACET TKT MV++ GEIT+KAN+D
Sbjct: 243 LYYMEDVSIGHVHQIQSDISDAVLDACLTQDPDSKVACETCTKTDMVMIFGEITTKANID 302
Query: 383 YQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLM 562
Y+K+VR+T + IG+ GFD C V++ + QQSPNI V + + AGDQG M
Sbjct: 303 YEKIVRDTCRTIGFVFYDVGFDVDNCKVLVNIGQQSPNITQDV------QGISAGDQGHM 356
Query: 563 FGYATDETEECMPLTVVLAHKLNQKIAELR 652
FGYAT+ET + MPL+ VL+ KL+ ++ E+R
Sbjct: 357 FGYATNETPKLMPLSHVLSTKLSARLTEVR 386
Score = 34.7 bits (76), Expect = 3.3
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = +3
Query: 615 LHTNSIRKLQSSGRNGEFWWARPDSKTQVTCEYVFAGGATVP 740
L T +L +N W RPD KTQVT EY GA P
Sbjct: 374 LSTKLSARLTEVRKNETCSWLRPDGKTQVTVEYHDENGAMAP 415
>UniRef50_Q1GND0 Cluster: S-adenosylmethionine synthetase; n=29;
Alphaproteobacteria|Rep: S-adenosylmethionine synthetase
- Sphingopyxis alaskensis (Sphingomonas alaskensis)
Length = 406
Score = 137 bits (331), Expect = 4e-31
Identities = 77/162 (47%), Positives = 101/162 (62%), Gaps = 11/162 (6%)
Frame = +2
Query: 200 FLFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSK--- 370
FLFTSES EGHPDK+ DQISD+I+D L +DP+A ACET+T T +V+L GEI K
Sbjct: 5 FLFTSESVSEGHPDKVADQISDSIVDLFLAKDPEARVACETLTTTQLVVLAGEIRCKGVF 64
Query: 371 --------ANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRN 526
A + + VR TV+ IGY+ + GF + L QSP IA GV E
Sbjct: 65 EDGEWAPGALDEIEATVRRTVREIGYEQA--GFHWNRFRFENNLHGQSPQIAQGVDEGAG 122
Query: 527 DEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELR 652
+E GAGDQG+MFGYA+DET + MP T+ +HK+ +++A R
Sbjct: 123 KDE-GAGDQGIMFGYASDETPDFMPATLDYSHKILERMASDR 163
>UniRef50_Q2U8T6 Cluster: S-adenosylmethionine synthetase; n=2;
Ascomycota|Rep: S-adenosylmethionine synthetase -
Aspergillus oryzae
Length = 384
Score = 136 bits (329), Expect = 7e-31
Identities = 66/154 (42%), Positives = 99/154 (64%), Gaps = 1/154 (0%)
Frame = +2
Query: 182 MEDGSVFLFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEI 361
M+ S FLFTSES GEGHPDK+CDQ++DAILD L Q+P + A E + G+V++ G +
Sbjct: 1 MKSQSKFLFTSESVGEGHPDKICDQVADAILDECLKQNPLSKVAIEVAVRPGLVIVFGVV 60
Query: 362 TSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN-RNDEEV 538
+D +VR +K IGY + DY+TC VM ++ P++ G+ ++
Sbjct: 61 HFIPQLDIDAIVRFVLKDIGYTSPDQELDYRTCQVMDCVELH-PSLFNGISSGLEAPDDE 119
Query: 539 GAGDQGLMFGYATDETEECMPLTVVLAHKLNQKI 640
AGDQG+ FGYATDET + +PLT+ LAH++++++
Sbjct: 120 PAGDQGMAFGYATDETPQLLPLTLHLAHRISREL 153
Score = 49.2 bits (112), Expect = 1e-04
Identities = 34/91 (37%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = +3
Query: 633 RKLQSSGRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVSLATL*KRLPXRPCEM 812
R+L+++ N W RPD+K QVT EYV G VP RVH VV++ + P P E
Sbjct: 151 RELKAAHTNRILPWLRPDTKAQVTVEYVEDEGRMVPTRVHNVVITA----QHTPGVPLEK 206
Query: 813 RSEKRSSXXV---ILXXYLDXRXVXXIXPXG 896
+ V I YLD R I P G
Sbjct: 207 LRQGILDKVVRKSIPAKYLDDRTAYHIQPTG 237
>UniRef50_Q7QWJ4 Cluster: S-adenosylmethionine synthetase; n=1;
Giardia lamblia ATCC 50803|Rep: S-adenosylmethionine
synthetase - Giardia lamblia ATCC 50803
Length = 436
Score = 136 bits (328), Expect = 9e-31
Identities = 67/151 (44%), Positives = 94/151 (62%)
Frame = +2
Query: 200 FLFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKANV 379
FLFTSE EGHPDK+CDQISD ILD L QD A A + K V L GEI++ A V
Sbjct: 10 FLFTSEQVSEGHPDKICDQISDRILDTILAQDKIARVAADVAIKDNTVFLLGEISTTAVV 69
Query: 380 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 559
DY ++VR+ ++ IGY+D D++T ++ + QSP+I V +E+ AGDQG+
Sbjct: 70 DYNQIVRDVLREIGYEDEKTSCDWRTVEIINRISSQSPDIYQAVF---RQDELCAGDQGI 126
Query: 560 MFGYATDETEECMPLTVVLAHKLNQKIAELR 652
M GYA+ ET+ MP T + A+ L +++ +R
Sbjct: 127 MIGYASQETKALMPATHLFANLLAMRLSRVR 157
>UniRef50_Q4A5F4 Cluster: S-adenosylmethionine synthetase; n=4;
Bacteria|Rep: S-adenosylmethionine synthetase -
Mycoplasma synoviae (strain 53)
Length = 382
Score = 132 bits (320), Expect = 9e-30
Identities = 67/142 (47%), Positives = 92/142 (64%)
Frame = +2
Query: 203 LFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKANVD 382
LFTSES G GHPDK+CDQISDAILDA+L DP + A ET+ V + GE+ SK VD
Sbjct: 4 LFTSESVGRGHPDKICDQISDAILDAYLTWDPHSKVAVETMVSGNNVFIAGEVKSKVTVD 63
Query: 383 YQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLM 562
++ + +++IGY ++ F + + QS NIA GV+ +D ++GAGDQG M
Sbjct: 64 VIEIAKNVLRNIGYYSNNTSF-------ITDIKSQSENIAMGVNLQDSD-DLGAGDQGFM 115
Query: 563 FGYATDETEECMPLTVVLAHKL 628
FGYAT+ET + MPL + L +K+
Sbjct: 116 FGYATNETSQYMPLGITLCNKI 137
>UniRef50_Q661P3 Cluster: S-adenosylmethionine synthetase; n=3;
Borrelia burgdorferi group|Rep: S-adenosylmethionine
synthetase - Borrelia garinii
Length = 392
Score = 129 bits (312), Expect = 8e-29
Identities = 65/150 (43%), Positives = 95/150 (63%), Gaps = 2/150 (1%)
Frame = +2
Query: 209 TSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITS--KANVD 382
TSE+ EGHPDK+ DQISDAILD L D +A ACE I +V++ GEI S K +D
Sbjct: 12 TSEAVSEGHPDKIADQISDAILDEILKVDKNAKVACEVIITQNLVVIAGEINSPVKKTLD 71
Query: 383 YQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLM 562
+++ ++ +K IGY + G DYKT +V+ A+ QS +I + + + +GAGDQG++
Sbjct: 72 IKEIAKKIIKDIGYTNIDYGLDYKTITVIDAIGNQSQDIINAI-KKKGSNALGAGDQGII 130
Query: 563 FGYATDETEECMPLTVVLAHKLNQKIAELR 652
FGYA DET+ +P LA+ + +K + LR
Sbjct: 131 FGYACDETKNFLPAPYELANSILKKASNLR 160
Score = 34.3 bits (75), Expect = 4.3
Identities = 18/31 (58%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 624 NSIRKLQSSGR-NGEFWWARPDSKTQVTCEY 713
NSI K S+ R +G W RPDSK+QVT EY
Sbjct: 150 NSILKKASNLRKSGAIEWLRPDSKSQVTIEY 180
>UniRef50_Q7NB16 Cluster: S-adenosylmethionine synthetase; n=2;
Mycoplasmataceae|Rep: S-adenosylmethionine synthetase -
Mycoplasma gallisepticum
Length = 395
Score = 127 bits (307), Expect = 3e-28
Identities = 69/170 (40%), Positives = 104/170 (61%)
Frame = +2
Query: 140 KMNGYAKTNGHSYDMEDGSVFLFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACE 319
K+ GY N ++ ++T+ES G HPDK+CDQI+DAILDA L QD ++ ACE
Sbjct: 3 KIKGYFTLN--IINLNHNRKGVYTAESVGSAHPDKLCDQIADAILDACLKQDQNSRVACE 60
Query: 320 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNI 499
+ ++++ GEI++KA+VDY + V GYD S D+ +++ ++QQS I
Sbjct: 61 VMACNHLIIIAGEISTKASVDYVGTAWKVVNQFGYDRS----DF---TIIANINQQSSEI 113
Query: 500 AAGVHENRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAEL 649
A V ++ + ++GAGDQG+ GYA DET+ MPL V++AH L + EL
Sbjct: 114 AQSV--DQKNHKIGAGDQGITVGYACDETKNQMPLAVMMAHDLVRLAKEL 161
>UniRef50_Q6KHY1 Cluster: S-adenosylmethionine synthetase; n=7;
Mycoplasma|Rep: S-adenosylmethionine synthetase -
Mycoplasma mobile
Length = 386
Score = 122 bits (293), Expect = 2e-26
Identities = 62/148 (41%), Positives = 102/148 (68%)
Frame = +2
Query: 203 LFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKANVD 382
+FTSES G+GHPDK+CDQISD ILD+ L +D +A ACE + ++++ GEI + + +D
Sbjct: 5 IFTSESVGKGHPDKICDQISDRILDSILKKDCNARVACEVMASNKLIVIGGEIKTNSYID 64
Query: 383 YQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLM 562
K + +GYD++ D+ +++ +++QS +I+ GV ++++ + AGDQG++
Sbjct: 65 VVKEAWNILLKLGYDEN----DF---TIISNINKQSSDISFGV--DKSNGSIAAGDQGIV 115
Query: 563 FGYATDETEECMPLTVVLAHKLNQKIAE 646
FGYAT+ETE+ +PL V+AH++ KIAE
Sbjct: 116 FGYATNETEQFLPLNFVIAHEI-LKIAE 142
>UniRef50_Q5FGR4 Cluster: S-adenosylmethionine synthetase; n=13;
Rickettsiales|Rep: S-adenosylmethionine synthetase -
Ehrlichia ruminantium (strain Gardel)
Length = 401
Score = 118 bits (285), Expect = 2e-25
Identities = 61/154 (39%), Positives = 91/154 (59%), Gaps = 3/154 (1%)
Frame = +2
Query: 194 SVFLFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKA 373
S ++ TSES GHPDK+ DQISDAILD +++ +P A ET+ V + GEI
Sbjct: 9 SSYIITSESVSSGHPDKIADQISDAILDYYISLNPFVHTAIETLVTKNKVFIAGEICG-V 67
Query: 374 NVD---YQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGA 544
NVD Q + R +K IGY+ GF ++ + + + +QSP+I GV+ N GA
Sbjct: 68 NVDNSIIQSIARSVIKEIGYEQD--GFHWENVDIEILIHEQSPDIIVGVNSGENQ---GA 122
Query: 545 GDQGLMFGYATDETEECMPLTVVLAHKLNQKIAE 646
GDQG+++GYA +ETE MP ++ +H + + I +
Sbjct: 123 GDQGIVYGYAINETETLMPASIFYSHLILRNIMD 156
>UniRef50_A6BGC6 Cluster: S-adenosylmethionine synthetase; n=1;
Dorea longicatena DSM 13814|Rep: S-adenosylmethionine
synthetase - Dorea longicatena DSM 13814
Length = 387
Score = 118 bits (283), Expect = 3e-25
Identities = 79/219 (36%), Positives = 115/219 (52%), Gaps = 10/219 (4%)
Frame = +2
Query: 206 FTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKANVDY 385
+T+ES EGHPDK+CDQI+DAILD L DP + ACE + G V + GEITS
Sbjct: 6 YTAESVTEGHPDKVCDQIADAILDECLRYDPSSRVACEVLATRGNVFVAGEITSGYEPPV 65
Query: 386 QKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENR----------NDEE 535
V+R+ ++ GY + G + T + QQSP+IA V ++ D
Sbjct: 66 FDVIRKVLEECGY--CTDGIEMDT-----FVHQQSPDIAKAVSVSKEFRDNIGAKLRDRS 118
Query: 536 VGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRAKWRILVGKTRFKNTGYLRIC 715
GAGDQG+M GYA D+T + MP+ VLAH++ ++++ R I K F + G ++
Sbjct: 119 RGAGDQGVMVGYACDDTPQLMPMPTVLAHRITRELSACRRSGYI---KDIFSD-GKAQVT 174
Query: 716 ICWWCNSPTESSYCSRVTCNTLKKITLXTLRDEIREKVI 832
+ + P V+C + +L L EIREKV+
Sbjct: 175 VEYEDGKPVRLESVV-VSCQHGAEKSLKKLDAEIREKVL 212
>UniRef50_UPI00015BD1C2 Cluster: UPI00015BD1C2 related cluster; n=1;
unknown|Rep: UPI00015BD1C2 UniRef100 entry - unknown
Length = 372
Score = 115 bits (276), Expect = 2e-24
Identities = 56/149 (37%), Positives = 87/149 (58%)
Frame = +2
Query: 212 SESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKANVDYQK 391
+ES EGHPDK+ D ISD ILD + +DP + + + + +V + GE++S A VD Q
Sbjct: 7 AESPFEGHPDKLADIISDEILDEFMRKDPFSRVSINVLLSSNIVFIAGEVSSSAYVDLQI 66
Query: 392 VVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGY 571
V ++ +K +GY GFD V+ ++++QSP IA + GAGD ++ GY
Sbjct: 67 VSKKAIKEVGYTKPEYGFDGDLIGVISSINEQSPEIALCIASE------GAGDSAIVVGY 120
Query: 572 ATDETEECMPLTVVLAHKLNQKIAELRAK 658
ATDETE +P + AHK+++ ++ R K
Sbjct: 121 ATDETESFLPAPIYFAHKISKTTSDFRKK 149
>UniRef50_Q2GDS4 Cluster: S-adenosylmethionine synthetase; n=1;
Neorickettsia sennetsu str. Miyayama|Rep:
S-adenosylmethionine synthetase - Neorickettsia sennetsu
(strain Miyayama)
Length = 382
Score = 111 bits (266), Expect = 3e-23
Identities = 59/149 (39%), Positives = 90/149 (60%), Gaps = 2/149 (1%)
Frame = +2
Query: 206 FTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEI--TSKANV 379
F+SE+ GHPDK+ DQISD +LD +L +DP + A ET+ V++ GEI N
Sbjct: 8 FSSEAVLPGHPDKIADQISDLVLDTYLQKDPSSRVAAETMVTPDRVIVAGEIYGPEVTNA 67
Query: 380 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 559
+ ++ +R +K IGY+ D+++ ++ L +QSP I+AG+ R +GAGDQG+
Sbjct: 68 ELEEKIRLFLKGIGYEKHL--LDWESLEIVNLLHEQSPEISAGL---RRSASLGAGDQGV 122
Query: 560 MFGYATDETEECMPLTVVLAHKLNQKIAE 646
MFGYATDET MP + A ++ + + E
Sbjct: 123 MFGYATDETPVGMPAPMYYAREIIRVVRE 151
>UniRef50_Q6SZ22 Cluster: S-adenosylmethionine synthetase; n=4;
Streptococcus|Rep: S-adenosylmethionine synthetase -
Streptococcus pyogenes
Length = 353
Score = 109 bits (262), Expect = 9e-23
Identities = 63/153 (41%), Positives = 88/153 (57%)
Frame = +2
Query: 191 GSVFLFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSK 370
G + + +SE GHPDK+CDQISDAIL L D + A ET+ K V++ GEI+++
Sbjct: 6 GGIMIISSEQVSVGHPDKICDQISDAILTECLKYDKSSRVAVETLIKDNQVVVAGEISTR 65
Query: 371 ANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGD 550
+ + +VR+ V+ +G K V L QS +IA GV + GAGD
Sbjct: 66 HYFNLENIVRQVVEPLG---------MKNVRVTNLLGLQSSDIAQGV------DNGGAGD 110
Query: 551 QGLMFGYATDETEECMPLTVVLAHKLNQKIAEL 649
QG+MFGYATDET E +PL VLA ++ +K+ L
Sbjct: 111 QGMMFGYATDETPEYLPLPYVLATRVLEKLMSL 143
>UniRef50_P78003 Cluster: S-adenosylmethionine synthetase; n=4;
Mycoplasma|Rep: S-adenosylmethionine synthetase -
Mycoplasma pneumoniae
Length = 383
Score = 107 bits (256), Expect = 5e-22
Identities = 54/148 (36%), Positives = 85/148 (57%)
Frame = +2
Query: 206 FTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKANVDY 385
+ +E+ G GHPDK+CDQI+D+ILD + Q P + ACE ++++ GEI + VD
Sbjct: 13 YVAEAVGRGHPDKICDQIADSILDECIKQSPTSHVACEVFASKNLIMVGGEILTTGYVDV 72
Query: 386 QKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMF 565
+ + + +GY ++ F + +C ++ QS I V N +E+GAGDQG+
Sbjct: 73 VQTGWKVLNRLGYTEND--FSFLSC-----INSQSSEINQAVQSN---DEIGAGDQGITV 122
Query: 566 GYATDETEECMPLTVVLAHKLNQKIAEL 649
GYA ETE+ MPL ++A L Q+ A +
Sbjct: 123 GYACSETEQLMPLGSIVAQALVQRAARI 150
>UniRef50_O09486 Cluster: S-adenosylmethionine synthetase; n=1;
Amoeba proteus|Rep: S-adenosylmethionine synthetase -
Amoeba proteus (Amoeba)
Length = 426
Score = 107 bits (256), Expect = 5e-22
Identities = 77/205 (37%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Frame = +2
Query: 182 MEDGSVFLFTSESXGEGHPDKMCDQISDAILDAHLNQDPD----AXFACETITKTGMVLL 349
M+ + +LF SE+ GHPDK CDQ+SD +LD L + + A ET K +V L
Sbjct: 1 MQQNTRYLFASEAVSRGHPDKACDQVSDRVLDYCLQAEKKCKKASRVALETTIKGNVVGL 60
Query: 350 CGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVH--ENR 523
GE+T + RE V IGY D TCSV + + Q I VH E
Sbjct: 61 FGEVTCQKTFPTISWFRELVTEIGYSREDLDLDPTTCSVHINVRGQEAEIRGVVHNQERA 120
Query: 524 NDEEVGAGDQGLMFGYATDETEECMPLTVVLAHK----LNQKIAELR-AKWRILVGK--- 679
E +GAGDQGLMFGYATDET E P L + L K E R K + V K
Sbjct: 121 AKETLGAGDQGLMFGYATDETPERCPCLWFLLRRFKLALRSKFEEARKKKIELAVAKGIK 180
Query: 680 -TRFKNTGYLRICI-CWWCNSPTES 748
++ T LR I WW ++ +S
Sbjct: 181 VSQVDATPELRDTIDFWWLHTDAKS 205
Score = 33.5 bits (73), Expect = 7.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 663 EFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVSL 770
+FWW D+K+QV EY GA P V+S+
Sbjct: 195 DFWWLHTDAKSQVIIEYEDDSGALKPITARVAVLSV 230
>UniRef50_A6QA94 Cluster: S-adenosylmethionine synthetase; n=20;
Epsilonproteobacteria|Rep: S-adenosylmethionine
synthetase - Sulfurovum sp. (strain NBC37-1)
Length = 405
Score = 103 bits (246), Expect = 8e-21
Identities = 58/155 (37%), Positives = 90/155 (58%), Gaps = 7/155 (4%)
Frame = +2
Query: 197 VFLFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEI-TSKA 373
++LFTSES GHPDK D I+D I+D+ L +DP+A A E +++ GE+ TS A
Sbjct: 1 MYLFTSESVSAGHPDKCADLIADTIVDSLLQRDPNAKVATEVFISGKHIIIGGEVKTSTA 60
Query: 374 --NVDYQKVVRETVKHIGYDDS----SKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEE 535
NV Y++ ++ ++ IGY + + F + + + +QSP+I GV + N E
Sbjct: 61 VDNVFYEECAQKALEKIGYPEGGFKRGETFFPDEAEIEVYVSKQSPDITMGVVKEGN--E 118
Query: 536 VGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKI 640
+GAGDQG+MFGYAT E ++ MP A ++ +
Sbjct: 119 IGAGDQGMMFGYATCERDDYMPSAFAYAREIRDAL 153
>UniRef50_Q2LSR0 Cluster: S-adenosylmethionine synthetase; n=1;
Syntrophus aciditrophicus SB|Rep: S-adenosylmethionine
synthetase - Syntrophus aciditrophicus (strain SB)
Length = 392
Score = 92.3 bits (219), Expect = 2e-17
Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 9/157 (5%)
Frame = +2
Query: 209 TSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVL-----LC---GEIT 364
TSES GHPD + D I+ I+ A L+++ + + G+ + LC GE+
Sbjct: 4 TSESVKVGHPDIVADSIAANIIAAILDEEKKIGLTVDNMPHCGIEVFLGKGLCIVGGEVA 63
Query: 365 SKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRND-EEVG 541
++ VD ++ VR+TV +GY D G + + ++ + QSP+I G + +E+G
Sbjct: 64 TRIYVDIERCVRDTVLKLGYCDYELGLNGNSMGILNTIIPQSPDINIGTRADLGKYKEIG 123
Query: 542 AGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELR 652
AGDQG+++G+A DET E +PL VLA K+ + E +
Sbjct: 124 AGDQGIIYGFACDETPELLPLPYVLATKMMRVFEEAK 160
>UniRef50_Q60BL6 Cluster: S-adenosylmethionine synthetase; n=6;
Bacteria|Rep: S-adenosylmethionine synthetase -
Methylococcus capsulatus
Length = 397
Score = 91.1 bits (216), Expect = 4e-17
Identities = 54/159 (33%), Positives = 82/159 (51%), Gaps = 3/159 (1%)
Frame = +2
Query: 200 FLFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKANV 379
FLFTSE+ EGHPD +CD ISDA++D L QDP A E +V L S A V
Sbjct: 5 FLFTSEAVTEGHPDCVCDIISDAVVDRFLQQDPYARVVTECALSKSVVFLAARFASTAVV 64
Query: 380 DYQKVVRETVKHIGY---DDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGD 550
D + R T++ IGY + S+ T ++ +L+ +S A + + D ++ +
Sbjct: 65 DIPDLARRTIEDIGYHPAEFSAPESTVVTSFIVQSLEGRSERDEAEMTDKELD-QLTVKN 123
Query: 551 QGLMFGYATDETEECMPLTVVLAHKLNQKIAELRAKWRI 667
Q FG+A T E +PL +VLA +L ++ R + +
Sbjct: 124 QITQFGFACSHTPELLPLPIVLARRLAHQLTGARRRGEV 162
>UniRef50_Q6A7D8 Cluster: S-adenosylmethionine synthetase; n=11;
Bacteria|Rep: S-adenosylmethionine synthetase -
Propionibacterium acnes
Length = 396
Score = 83.4 bits (197), Expect = 7e-15
Identities = 57/152 (37%), Positives = 82/152 (53%), Gaps = 8/152 (5%)
Frame = +2
Query: 209 TSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKANVDYQ 388
T+ES GHPDK+ DQI+D ILD L D A A E + +++ GEIT+ +
Sbjct: 6 TAESVCAGHPDKLADQIADQILDDILYDDKAARVAVEVMAAGRRIIVTGEITTNHRPRIR 65
Query: 389 KVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVH---ENRNDEE-----VGA 544
+ VR + GY S G + + +QS +I AGV E R + GA
Sbjct: 66 ESVRTALARAGY--SPLGI-----LIYVWTRRQSSDINAGVTTSLEARGGDSSAFALQGA 118
Query: 545 GDQGLMFGYATDETEECMPLTVVLAHKLNQKI 640
GDQG ++GYAT ET E +PL +VLAH++ +++
Sbjct: 119 GDQGTVYGYATAETPERLPLPLVLAHRICERL 150
>UniRef50_A6PKG8 Cluster: Methionine adenosyltransferase precursor;
n=1; Victivallis vadensis ATCC BAA-548|Rep: Methionine
adenosyltransferase precursor - Victivallis vadensis
ATCC BAA-548
Length = 338
Score = 83.4 bits (197), Expect = 7e-15
Identities = 62/161 (38%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Frame = +2
Query: 203 LFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKANV- 379
L TSE GHPDK+ D IS +LD HL++DP FA E K V L GE+TSKAN
Sbjct: 2 LKTSEWVSLGHPDKIADYISCYLLDRHLDRDPYTRFAVEVQIKDNHVTLGGEVTSKANYS 61
Query: 380 --DYQKVVRETVKHIGYDDSSK---GFDYKTCS----VMLALDQQSPNIAAGVHENRNDE 532
D VR V IGY + G + C V + QQSP+IA GV +
Sbjct: 62 PEDIAAFVRAAVNQIGYTPEYQKRWGKENTICGDDLIVTQHIGQQSPDIAQGVDAD---- 117
Query: 533 EVGAGDQGLMFGYATDE-TEECMPLTVVLAHKLNQKIAELR 652
G GDQG+ G A + + MP LA K+ + + ++R
Sbjct: 118 --GYGDQGIFHGMAVNSPATDYMPEDWYLAKKIGKHLYDIR 156
>UniRef50_Q1VNA9 Cluster: S-adenosylmethionine synthetase; n=1;
Psychroflexus torquis ATCC 700755|Rep:
S-adenosylmethionine synthetase - Psychroflexus torquis
ATCC 700755
Length = 344
Score = 71.3 bits (167), Expect = 3e-11
Identities = 48/141 (34%), Positives = 77/141 (54%), Gaps = 7/141 (4%)
Frame = +2
Query: 251 DQISDAILDAHLNQDPDAXFACETI---TKTG-MVLLCGEITSKANV---DYQKVVRETV 409
D ISD +L L +P + A ET+ TK G +V++ GEI+ AN+ D + +V E +
Sbjct: 2 DLISDYVLTKALENNPSSRVAVETVLTGTKDGGLVMVGGEISEIANISTEDIKTIVHEAL 61
Query: 410 KHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDETE 589
S + F+ ++ L QS I A V E DE+ GAGDQG+M G+AT++T+
Sbjct: 62 NKT-IKTSFEDFNLDRLNIYNELTPQSEEIRAAVEE---DEDQGAGDQGIMIGFATNKTD 117
Query: 590 ECMPLTVVLAHKLNQKIAELR 652
MP T ++ + + + +L+
Sbjct: 118 SFMPSTFDISRNIQKTLWDLQ 138
>UniRef50_Q7R6Z1 Cluster: Putative uncharacterized protein PY07799;
n=2; cellular organisms|Rep: Putative uncharacterized
protein PY07799 - Plasmodium yoelii yoelii
Length = 1022
Score = 61.7 bits (143), Expect = 2e-08
Identities = 41/134 (30%), Positives = 63/134 (47%)
Frame = -3
Query: 601 RHAFFCLICCITEHQALVSCPNFLVISVLMHPSSNVW*LLV*CEHHTACLVIKAFGRIII 422
RH + L+ + EHQ LV+ F+V+ +H +V LL A L I+A +++
Sbjct: 889 RHQYVGLVGGVAEHQTLVARSLFVVVE-FVHTHGDVGRLLADGGQDGAALPIEADFGVVV 947
Query: 421 TNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGFTCKXCVRILIQVRV*NSVAYLVAHF 242
++ AH FL +H G DFA + H G GF + IL Q R+ + + LV
Sbjct: 948 ADLVHDLAHQFLGVHPGGGGDFAGEHDHAGLHEGFHGHAGLGILCQDRIQHRIGNLVRDL 1007
Query: 241 VWMTLAXRFRCEQK 200
V +T R E +
Sbjct: 1008 VGVTFGDGLRSEDE 1021
>UniRef50_A5AMB5 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 237
Score = 49.6 bits (113), Expect = 1e-04
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = +2
Query: 530 EEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAEL 649
+E+G GDQ MFGYATD+ E MPL VLA KL +++E+
Sbjct: 145 KEIGVGDQSHMFGYATDDIPEFMPLNHVLATKLGARLSEV 184
Score = 43.2 bits (97), Expect = 0.009
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +3
Query: 636 KLQSSGRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 767
+L +NG + W RP+ KTQV +Y G A VP R+HTV+ S
Sbjct: 180 RLSEVCKNGTYPWLRPNDKTQVIVKYHNDGDAMVPIRMHTVLTS 223
>UniRef50_Q027Y1 Cluster: Methionine adenosyltransferase; n=1;
Solibacter usitatus Ellin6076|Rep: Methionine
adenosyltransferase - Solibacter usitatus (strain
Ellin6076)
Length = 364
Score = 48.4 bits (110), Expect = 2e-04
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 5/155 (3%)
Frame = +2
Query: 203 LFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKA--N 376
L+ +E GHPDK+CD I+DA+++ + + A A E V + G I +
Sbjct: 2 LYAAEYVLPGHPDKLCDAIADALVEEAVRHEKRALCAIEVAVHRASVFVTGRIACRGARR 61
Query: 377 VDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAG--VHENRNDEEVGAGD 550
+ + +VRE + GY + + LD ++ N+ G V EV A D
Sbjct: 62 IPVKDIVRECYRVAGYRTEWRPSPEE-------LDVRT-NLCLGPLVEGEAGFREV-ADD 112
Query: 551 QGLMFGYATDET-EECMPLTVVLAHKLNQKIAELR 652
Q ++ GYA D +P LA +L +++ LR
Sbjct: 113 QSIITGYAIDSPGTNFLPPEHWLASRLARRLETLR 147
>UniRef50_A7Q4X0 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 306
Score = 43.6 bits (98), Expect = 0.007
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +3
Query: 636 KLQSSGRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVV 764
+L +NG W +PD KTQVT EY GA VP VH V++
Sbjct: 42 RLTEVKKNGTCSWLKPDGKTQVTIEYHNENGAMVPFHVHIVLI 84
>UniRef50_Q95QX7 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 84
Score = 42.3 bits (95), Expect = 0.016
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +2
Query: 200 FLFTSESXGEGHPDKMCDQ 256
FLFTSES EGHPDKMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
>UniRef50_A4DEX8 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes FSL N1-017|Rep: Putative
uncharacterized protein - Listeria monocytogenes FSL
N1-017
Length = 277
Score = 35.9 bits (79), Expect = 1.4
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +2
Query: 215 ESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKANVDYQKV 394
E HPDK+ D+IS AI+D ++ + A E + G+ + I + A + +++
Sbjct: 20 EKVNPSHPDKIADRISGAIVDLAYQEETNPKIAVEVLIGHGICHVI--IETSAALSFEE- 76
Query: 395 VRETVKHIGYD 427
VR+ +K I D
Sbjct: 77 VRKAIKRIAGD 87
>UniRef50_Q5BYJ5 Cluster: Putative uncharacterized protein; n=1;
Schistosoma japonicum|Rep: Putative uncharacterized
protein - Schistosoma japonicum (Blood fluke)
Length = 43
Score = 35.1 bits (77), Expect = 2.5
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = -1
Query: 381 STLALDVISPHKSTIPVLVMVSHAKXASGS*FRCASRIASLI 256
S AL+ ISP P+L SHA ASGS F+ +S +ASLI
Sbjct: 2 SITALEEISPPTIIRPLLTNDSHATLASGSCFKNSSSMASLI 43
>UniRef50_Q4S5S5 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 9
SCAF14729, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 664
Score = 34.3 bits (75), Expect = 4.3
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +2
Query: 266 AILDAHLNQDPDAXFACETIT---KTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSS 436
A L+A LN+ AC+ IT KT +VLL + N Q +RET+ IGY D
Sbjct: 343 ACLEA-LNEHLVCHPACKAITWQEKTAVVLLKKRRAYRDNQALQSALRETLALIGYMDPV 401
Query: 437 KGFDYKTCSV 466
KG + S+
Sbjct: 402 KGHGIRVLSI 411
>UniRef50_UPI0000F1FBF8 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 1206
Score = 33.9 bits (74), Expect = 5.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 586 RRMHAVDCSACTQTQSENCRAQGEMENFGGQDQIQKHRLL 705
RR+ C AC +T+ NC +M FGG +++K +L
Sbjct: 496 RRVRCKRCEACLRTECGNCNYCRDMRKFGGPGRLKKSCVL 535
>UniRef50_UPI00006A2011 Cluster: Tumor necrosis factor receptor
superfamily member 19L precursor (Receptor expressed in
lymphoid tissues).; n=1; Xenopus tropicalis|Rep: Tumor
necrosis factor receptor superfamily member 19L
precursor (Receptor expressed in lymphoid tissues). -
Xenopus tropicalis
Length = 313
Score = 33.9 bits (74), Expect = 5.7
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = -2
Query: 548 LLPQLPRHFCSHAPQQQCLVIVGLVRASHCMSCNQSLWTN 429
LLPQ+P H C H + L S C C+Q WTN
Sbjct: 223 LLPQMP-HLCKHQHHLHTVQGPALPTGSCCSRCSQKKWTN 261
>UniRef50_Q15TP8 Cluster: Adenosine deaminase; n=2;
Gammaproteobacteria|Rep: Adenosine deaminase -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 537
Score = 33.9 bits (74), Expect = 5.7
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 377 VDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDE 532
VD + + + +G +D+ KG+ + S + L Q+ PNI +H DE
Sbjct: 317 VDRHRDIYVGINMVGREDNDKGYPLRFLSTLRKLRQRIPNIPLAIHAGEVDE 368
>UniRef50_Q8TC07 Cluster: TBC1 domain family member 15; n=39;
Euteleostomi|Rep: TBC1 domain family member 15 - Homo
sapiens (Human)
Length = 691
Score = 33.9 bits (74), Expect = 5.7
Identities = 24/79 (30%), Positives = 38/79 (48%)
Frame = +2
Query: 95 LYXWANSKFRMPETSKMNGYAKTNGHSYDMEDGSVFLFTSESXGEGHPDKMCDQISDAIL 274
++ W K + P T+ M G++K + +D GS S + P +M D +SDAI
Sbjct: 232 IHHWKKIK-KDPYTATMIGFSKVTNYIFDSLRGS-----DPSTHQRPPSEMADFLSDAIP 285
Query: 275 DAHLNQDPDAXFACETITK 331
+NQ + F E IT+
Sbjct: 286 GLKINQQEEPGF--EVITR 302
>UniRef50_Q22516 Cluster: Chromodomain-helicase-DNA-binding protein
3 homolog; n=3; Caenorhabditis|Rep:
Chromodomain-helicase-DNA-binding protein 3 homolog -
Caenorhabditis elegans
Length = 1787
Score = 33.9 bits (74), Expect = 5.7
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 266 AILDAHLNQDPDAXFACETITKTGM-VLLCGEITSKANVDYQKVVRET 406
A +D ++ Q P+ ++C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>UniRef50_Q8FXU7 Cluster: Protease, putative; n=6; Brucellaceae|Rep:
Protease, putative - Brucella suis
Length = 261
Score = 33.5 bits (73), Expect = 7.5
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +2
Query: 176 YDMEDGSVFLFTSESXGEGHPDKMCDQISDAILDAHL 286
YD + G++ + SE+ G+GH + + D + A+ +A +
Sbjct: 50 YDSDSGAMLAYVSENIGKGHAEVLMDYVGQAMREAQI 86
>UniRef50_Q82ZM8 Cluster: Polysaccharide lyase, family 8; n=1;
Enterococcus faecalis|Rep: Polysaccharide lyase, family
8 - Enterococcus faecalis (Streptococcus faecalis)
Length = 1372
Score = 33.1 bits (72), Expect = 9.9
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 509 VHENRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRAKWRI-LVGKTR 685
V + N V +G+ + E + +P+TVV N++ AE+RAKW++ L+G T+
Sbjct: 224 VDQTGNLTAVKSGEAKVTVKIKGTEISDTIPVTVVAE---NKQYAEMRAKWKMRLLGTTQ 280
Query: 686 FKN 694
+ N
Sbjct: 281 YDN 283
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 862,547,614
Number of Sequences: 1657284
Number of extensions: 18188102
Number of successful extensions: 44326
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 42525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44276
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81571813589
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -