Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_P11
(900 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 256 2e-68
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 256 2e-68
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 252 2e-67
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 246 2e-65
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 173 2e-43
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 169 2e-42
U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical pr... 142 3e-34
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 125 5e-29
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 121 6e-28
U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical pr... 73 2e-13
U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 34 0.16
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 34 0.16
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 34 0.16
U61946-2|AAC24387.1| 341|Caenorhabditis elegans Serpentine rece... 30 2.6
Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z72510-2|CAA96652.1| 267|Caenorhabditis elegans Hypothetical pr... 29 6.0
U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical pr... 28 7.9
AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 28 7.9
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 256 bits (626), Expect = 2e-68
Identities = 114/151 (75%), Positives = 135/151 (89%)
Frame = +2
Query: 200 FLFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKANV 379
FLFTSES EGHPDKMCDQISDA+LDAHL QDP A ACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 380 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 559
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125
Query: 560 MFGYATDETEECMPLTVVLAHKLNQKIAELR 652
MFGYATDETEE MPLT++L+HKLN+K+ ELR
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNRKLHELR 156
Score = 64.5 bits (150), Expect = 1e-10
Identities = 30/45 (66%), Positives = 32/45 (71%)
Frame = +3
Query: 633 RKLQSSGRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 767
RKL R+GE W RPDSKTQVT EY GGA VP RVHTVV+S
Sbjct: 150 RKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVPLRVHTVVIS 194
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 256 bits (626), Expect = 2e-68
Identities = 114/151 (75%), Positives = 135/151 (89%)
Frame = +2
Query: 200 FLFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKANV 379
FLFTSES EGHPDKMCDQISDA+LDAHL QDP A ACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 380 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 559
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125
Query: 560 MFGYATDETEECMPLTVVLAHKLNQKIAELR 652
MFGYATDETEE MPLT++L+HKLN+K+ ELR
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNRKLHELR 156
Score = 64.5 bits (150), Expect = 1e-10
Identities = 30/45 (66%), Positives = 32/45 (71%)
Frame = +3
Query: 633 RKLQSSGRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 767
RKL R+GE W RPDSKTQVT EY GGA VP RVHTVV+S
Sbjct: 150 RKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVPLRVHTVVIS 194
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 252 bits (618), Expect = 2e-67
Identities = 114/151 (75%), Positives = 133/151 (88%)
Frame = +2
Query: 200 FLFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKANV 379
FLFTSES EGHPDKMCDQISDA+LDAHL QDP A ACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 380 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 559
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ +VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDIADVGAGDQGI 125
Query: 560 MFGYATDETEECMPLTVVLAHKLNQKIAELR 652
MFGYATDETEE MPLT++L+HKLN K+ ELR
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNYKLHELR 156
Score = 61.7 bits (143), Expect = 7e-10
Identities = 29/44 (65%), Positives = 31/44 (70%)
Frame = +3
Query: 636 KLQSSGRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 767
KL R+GE W RPDSKTQVT EY GGA VP RVHTVV+S
Sbjct: 151 KLHELRRSGELEWVRPDSKTQVTIEYSSEGGACVPLRVHTVVIS 194
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 246 bits (601), Expect = 2e-65
Identities = 110/153 (71%), Positives = 134/153 (87%)
Frame = +2
Query: 194 SVFLFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKA 373
S FLFTSES EGHPDKMCDQISDA+LDAHL QDP+A ACET+TKTGMV+LCGEITSKA
Sbjct: 3 SKFLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKTGMVMLCGEITSKA 62
Query: 374 NVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQ 553
VDYQ +VR ++ IG+ DSS GFD+KTC+V++AL+QQSP IAAGVH N++ E+VGAGDQ
Sbjct: 63 VVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGVHVNKDGEDVGAGDQ 122
Query: 554 GLMFGYATDETEECMPLTVVLAHKLNQKIAELR 652
G+MFGYATDETEE MPLT++L+HK+N ++ +LR
Sbjct: 123 GIMFGYATDETEETMPLTLILSHKINAELHKLR 155
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/44 (61%), Positives = 30/44 (68%)
Frame = +3
Query: 636 KLQSSGRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 767
+L RNG W RPDSK+QVT EY GAT+P RVHTVVVS
Sbjct: 150 ELHKLRRNGTLPWVRPDSKSQVTIEYESRHGATIPLRVHTVVVS 193
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 173 bits (420), Expect = 2e-43
Identities = 76/105 (72%), Positives = 95/105 (90%)
Frame = +2
Query: 338 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 517
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 518 NRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELR 652
+++ ++VGAGDQG+MFGYATDETEE MPLT++L+HKLN+K+ ELR
Sbjct: 61 DKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELR 105
Score = 64.5 bits (150), Expect = 1e-10
Identities = 30/45 (66%), Positives = 32/45 (71%)
Frame = +3
Query: 633 RKLQSSGRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 767
RKL R+GE W RPDSKTQVT EY GGA VP RVHTVV+S
Sbjct: 99 RKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVPLRVHTVVIS 143
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 169 bits (412), Expect = 2e-42
Identities = 76/105 (72%), Positives = 93/105 (88%)
Frame = +2
Query: 338 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 517
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 518 NRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELR 652
+++ +VGAGDQG+MFGYATDETEE MPLT++L+HKLN K+ ELR
Sbjct: 61 DKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELR 105
Score = 61.7 bits (143), Expect = 7e-10
Identities = 29/44 (65%), Positives = 31/44 (70%)
Frame = +3
Query: 636 KLQSSGRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 767
KL R+GE W RPDSKTQVT EY GGA VP RVHTVV+S
Sbjct: 100 KLHELRRSGELEWVRPDSKTQVTIEYSSEGGACVPLRVHTVVIS 143
>U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical
protein C06E7.1d protein.
Length = 173
Score = 142 bits (344), Expect = 3e-34
Identities = 64/81 (79%), Positives = 70/81 (86%)
Frame = +2
Query: 200 FLFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKANV 379
FLFTSES EGHPDKMCDQISDA+LDAHL QDP A ACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 380 DYQKVVRETVKHIGYDDSSKG 442
DYQ +VR +K IGYDDSSKG
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKG 86
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +3
Query: 378 WIIKKLCAKRSNILVMMIRPKAL----ITRHAV*CSH*TNNHQTLLLGCMRTEMTRKLGQ 545
W+I LC + S+ L ++I+ ITRHA+ H NNH LL T +
Sbjct: 97 WLIT-LC-QESHFLGLLIKYSIQFQDSITRHAMFLLHSNNNHLKSLLESTWTRIVTMSEP 154
Query: 546 ETRA*CSVMQQMRQKNAC 599
E + C M M+ K C
Sbjct: 155 EIKELCLDMLLMKPKKRC 172
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 125 bits (301), Expect = 5e-29
Identities = 54/78 (69%), Positives = 69/78 (88%)
Frame = +2
Query: 419 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDETEECM 598
GY D GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDETEE M
Sbjct: 20 GYFDYRNGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAM 79
Query: 599 PLTVVLAHKLNQKIAELR 652
PLT++L+HKLN+K+ ELR
Sbjct: 80 PLTLLLSHKLNRKLHELR 97
Score = 64.1 bits (149), Expect = 1e-10
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 633 RKLQSSGRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 767
RKL R+GE W RPDSKTQVT EY GGA +P RVHTVV+S
Sbjct: 91 RKLHELRRSGELEWVRPDSKTQVTIEYASEGGACIPLRVHTVVIS 135
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 121 bits (292), Expect = 6e-28
Identities = 54/83 (65%), Positives = 71/83 (85%), Gaps = 3/83 (3%)
Frame = +2
Query: 413 HIGYDDSSK---GFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDE 583
H+ D +K GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDE
Sbjct: 33 HLAQDPHAKVACGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDE 92
Query: 584 TEECMPLTVVLAHKLNQKIAELR 652
TEE MPLT++L+HKLN+K+ ELR
Sbjct: 93 TEEAMPLTLLLSHKLNRKLHELR 115
Score = 76.6 bits (180), Expect = 2e-14
Identities = 44/86 (51%), Positives = 50/86 (58%)
Frame = +2
Query: 200 FLFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFACETITKTGMVLLCGEITSKANV 379
FLFTSES EGHPDKMCDQISDA+LDAHL QDP A AC KT VL+ E S
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACGFDYKTCNVLVALEQQSPEIA 65
Query: 380 DYQKVVRETVKHIGYDDSSKGFDYKT 457
V +++ +G D F Y T
Sbjct: 66 AGVHVDKDS-DDVGAGDQGIMFGYAT 90
Score = 64.1 bits (149), Expect = 1e-10
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 633 RKLQSSGRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 767
RKL R+GE W RPDSKTQVT EY GGA +P RVHTVV+S
Sbjct: 109 RKLHELRRSGELEWVRPDSKTQVTIEYASEGGACIPLRVHTVVIS 153
>U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical
protein C06E7.1c protein.
Length = 51
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/39 (82%), Positives = 33/39 (84%)
Frame = +2
Query: 200 FLFTSESXGEGHPDKMCDQISDAILDAHLNQDPDAXFAC 316
FLFTSES EGHPDKMCDQISDA+LDAHL QDP A AC
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVAC 44
>U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical
protein C06E7.1b protein.
Length = 84
Score = 42.3 bits (95), Expect = 5e-04
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +2
Query: 200 FLFTSESXGEGHPDKMCDQ 256
FLFTSES EGHPDKMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 266 AILDAHLNQDPDAXFACETITKTGM-VLLCGEITSKANVDYQKVVRET 406
A +D ++ Q P+ ++C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 266 AILDAHLNQDPDAXFACETITKTGM-VLLCGEITSKANVDYQKVVRET 406
A +D ++ Q P+ ++C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 266 AILDAHLNQDPDAXFACETITKTGM-VLLCGEITSKANVDYQKVVRET 406
A +D ++ Q P+ ++C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>U61946-2|AAC24387.1| 341|Caenorhabditis elegans Serpentine
receptor, class h protein220 protein.
Length = 341
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1
Query: 694 HRLLANMYLLVVQQSHREFIL*SCHL 771
H L++ + +LVVQ+ +REFI SC L
Sbjct: 287 HGLVSTLVMLVVQKPYREFISKSCSL 312
>Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical
protein C46F11.2b protein.
Length = 459
Score = 29.1 bits (62), Expect = 4.5
Identities = 25/90 (27%), Positives = 35/90 (38%)
Frame = +2
Query: 293 DPDAXFACETITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVML 472
D D F E + +V+ G I + + +T I YD + FD K S L
Sbjct: 157 DSDGFFDLEDLPSRTVVVGAGYIAVEIAGVLANLGSDTHLLIRYDKVLRTFD-KMLSDEL 215
Query: 473 ALDQQSPNIAAGVHENRNDEEVGAGDQGLM 562
D +H+N EV GD GL+
Sbjct: 216 TADMDEETNPLHLHKNTQVTEVIKGDDGLL 245
>Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical
protein C46F11.2a protein.
Length = 473
Score = 29.1 bits (62), Expect = 4.5
Identities = 25/90 (27%), Positives = 35/90 (38%)
Frame = +2
Query: 293 DPDAXFACETITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVML 472
D D F E + +V+ G I + + +T I YD + FD K S L
Sbjct: 171 DSDGFFDLEDLPSRTVVVGAGYIAVEIAGVLANLGSDTHLLIRYDKVLRTFD-KMLSDEL 229
Query: 473 ALDQQSPNIAAGVHENRNDEEVGAGDQGLM 562
D +H+N EV GD GL+
Sbjct: 230 TADMDEETNPLHLHKNTQVTEVIKGDDGLL 259
>Z72510-2|CAA96652.1| 267|Caenorhabditis elegans Hypothetical
protein F53B7.3 protein.
Length = 267
Score = 28.7 bits (61), Expect = 6.0
Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Frame = +2
Query: 359 ITSKANVDYQKVVRETVKHIGYDD-SSKGFDYKTCSVML-ALDQQSPNIAAGVHENRNDE 532
I DY+K ++ + IG + +S+G+ Y + L + + G + R+
Sbjct: 92 IRELGGTDYRKYAQKELDAIGRETGNSRGYKYFGAAKDLPGVRELFEKSTEGEEQRRHRA 151
Query: 533 EVGAGDQGLMFGYATDETEECMPLTVVLAHK----LNQKIAELRAK 658
++ FGY DE +PL ++ K +N++ AE +A+
Sbjct: 152 DLLRNIDAHYFGYLDDEDGRLIPLEKLIEEKNIERINKEFAEKQAQ 197
>U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical
protein M03A1.3 protein.
Length = 669
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 320 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNI 499
T+T+TG L + + ++++ K + D ++K D KTC L +DQ N+
Sbjct: 37 TLTRTGDSLNLRIYDENSAIRKVHILQKEGKDVLVDCTNKKEDGKTCEAQLTVDQFEKNL 96
Query: 500 AAGV 511
+
Sbjct: 97 PISI 100
>AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +3
Query: 366 PKLTWIIKKLCAKRSNIL---VMMIRPKALITRH 458
PK+ W ++K+C K+ +I + I P+ L+T H
Sbjct: 253 PKIVWHLEKMCNKKEDISRGNPVSIPPQRLLTHH 286
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,416,551
Number of Sequences: 27780
Number of extensions: 463930
Number of successful extensions: 1225
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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