Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_P10
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0105 - 4337047-4337079,4337175-4337242,4337323-4337425,433...   104   8e-23
08_02_1361 - 26398987-26399019,26399320-26399387,26399458-263995...    93   3e-19
03_03_0132 + 14711645-14711839,14712641-14712970,14713689-147137...    29   6.5  
11_03_0158 + 10911997-10912078,10912203-10912288,10913780-109138...    28   8.5  

>09_02_0105 -
           4337047-4337079,4337175-4337242,4337323-4337425,
           4337507-4337737,4339307-4339347,4339437-4339473,
           4339603-4339605
          Length = 171

 Score =  104 bits (250), Expect = 8e-23
 Identities = 50/74 (67%), Positives = 59/74 (79%)
 Frame = +3

Query: 303 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 482
           M +YSRE +NP KS KA G +LRVHFKNT ETA AIRK+PL +A RYL++VI  K+ IPF
Sbjct: 1   MVKYSREANNPTKSSKAMGRDLRVHFKNTRETAFAIRKLPLGKAKRYLEDVIAHKQAIPF 60

Query: 483 RRFNGGVGRCAQAK 524
           RR+ GGVGR AQAK
Sbjct: 61  RRYCGGVGRTAQAK 74



 Score = 58.0 bits (134), Expect = 9e-09
 Identities = 26/38 (68%), Positives = 30/38 (78%)
 Frame = +1

Query: 547 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQV 660
           RWP KSA F+L LL+NAESNA+ K LDVD L + HIQV
Sbjct: 83  RWPAKSARFILDLLKNAESNAEVKGLDVDTLYVSHIQV 120


>08_02_1361 -
           26398987-26399019,26399320-26399387,26399458-26399560,
           26399658-26399888,26400791-26400826,26400891-26400931,
           26401028-26401064,26401158-26401160
          Length = 183

 Score = 93.1 bits (221), Expect = 3e-19
 Identities = 49/86 (56%), Positives = 58/86 (67%), Gaps = 12/86 (13%)
 Frame = +3

Query: 303 MGRYSREPDNPAKSCKARGSNLRVHFK------------NTYETAMAIRKMPLRRAVRYL 446
           MG+YS EP NP KS KA G +LRVHFK            NT ETA A+RK+PL +A RYL
Sbjct: 1   MGKYSTEPSNPTKSAKAMGRDLRVHFKVIVFARFVQCCSNTRETAFALRKLPLVKAKRYL 60

Query: 447 KNVIEKKECIPFRRFNGGVGRCAQAK 524
           ++VI  K+ IPFRR+ GGVGR AQ K
Sbjct: 61  EDVIAHKQAIPFRRYCGGVGRTAQVK 86



 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 28/47 (59%), Positives = 34/47 (72%)
 Frame = +1

Query: 520 QSSLAQHRXRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQV 660
           +S  +  + RWP KSA F+L LL+NAESNAD K LDVD L + HIQV
Sbjct: 86  KSRQSNGQGRWPAKSARFILDLLKNAESNADVKGLDVDNLFVSHIQV 132


>03_03_0132 +
           14711645-14711839,14712641-14712970,14713689-14713751,
           14713833-14713906,14714004-14714099,14714705-14714759,
           14714867-14714971,14715054-14715135,14715450-14715562,
           14715717-14716118
          Length = 504

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
 Frame = +1

Query: 538 HRXRWPKKSAEF--LLQLLRNAESNADNKTLD---VDRLVI-DHIQVCCLKPKLSEHKIV 699
           H+    +K+A F  L+Q    A ++A  + LD   + R ++ +H+  CCL+   S HK +
Sbjct: 184 HKIATFEKAAGFQALIQYTDAATASAAREALDGRSIPRYLLPEHVTSCCLRISFSAHKDL 243

Query: 700 N 702
           N
Sbjct: 244 N 244


>11_03_0158 +
           10911997-10912078,10912203-10912288,10913780-10913857,
           10913967-10914098,10914385-10914435,10914529-10914669,
           10914754-10914876,10914989-10915066,10915448-10915541,
           10915633-10915739,10915936-10916019,10916649-10916744,
           10916835-10917023,10917705-10917780,10918507-10918610,
           10918708-10918967,10920000-10920086,10920184-10920411,
           10920752-10920826,10921264-10921346,10921552-10921661
          Length = 787

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/67 (20%), Positives = 29/67 (43%)
 Frame = +3

Query: 294 ERIMGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKEC 473
           + ++ + +   +   K C  RGS +R+H KN      +    P RR    +  +++ +  
Sbjct: 528 KHVLAKMAERDEGTLKDCAQRGSFVRLHLKNVPTEIASKLVHPSRRLPVVVSGLLQHESK 587

Query: 474 IPFRRFN 494
           I    F+
Sbjct: 588 ISVLHFS 594


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,318,445
Number of Sequences: 37544
Number of extensions: 397727
Number of successful extensions: 805
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)