Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_P10
(875 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA ... 130 5e-30
BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17 p... 130 5e-30
BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17 p... 130 5e-30
BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17 p... 130 5e-30
BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17 p... 130 5e-30
BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17 p... 130 5e-30
AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17 p... 130 5e-30
AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens ... 36 0.25
>X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA for
putative ribosomal protein. ).
Length = 184
Score = 130 bits (315), Expect = 5e-30
Identities = 57/81 (70%), Positives = 70/81 (86%)
Frame = +3
Query: 303 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 482
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 483 RRFNGGVGRCAQAKQFGTTQG 545
RR+NGGVGRCAQAKQ+G TQG
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQG 81
Score = 65.7 bits (153), Expect = 2e-10
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = +1
Query: 547 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQV 660
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQV
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
>BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 130 bits (315), Expect = 5e-30
Identities = 57/81 (70%), Positives = 70/81 (86%)
Frame = +3
Query: 303 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 482
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 483 RRFNGGVGRCAQAKQFGTTQG 545
RR+NGGVGRCAQAKQ+G TQG
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQG 81
Score = 65.7 bits (153), Expect = 2e-10
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = +1
Query: 547 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQV 660
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQV
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
>BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 130 bits (315), Expect = 5e-30
Identities = 57/81 (70%), Positives = 70/81 (86%)
Frame = +3
Query: 303 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 482
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 483 RRFNGGVGRCAQAKQFGTTQG 545
RR+NGGVGRCAQAKQ+G TQG
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQG 81
Score = 65.7 bits (153), Expect = 2e-10
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = +1
Query: 547 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQV 660
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQV
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
>BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 130 bits (315), Expect = 5e-30
Identities = 57/81 (70%), Positives = 70/81 (86%)
Frame = +3
Query: 303 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 482
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 483 RRFNGGVGRCAQAKQFGTTQG 545
RR+NGGVGRCAQAKQ+G TQG
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQG 81
Score = 65.7 bits (153), Expect = 2e-10
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = +1
Query: 547 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQV 660
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQV
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
>BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 130 bits (315), Expect = 5e-30
Identities = 57/81 (70%), Positives = 70/81 (86%)
Frame = +3
Query: 303 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 482
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 483 RRFNGGVGRCAQAKQFGTTQG 545
RR+NGGVGRCAQAKQ+G TQG
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQG 81
Score = 65.7 bits (153), Expect = 2e-10
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = +1
Query: 547 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQV 660
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQV
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
>BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 130 bits (315), Expect = 5e-30
Identities = 57/81 (70%), Positives = 70/81 (86%)
Frame = +3
Query: 303 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 482
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 483 RRFNGGVGRCAQAKQFGTTQG 545
RR+NGGVGRCAQAKQ+G TQG
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQG 81
Score = 65.7 bits (153), Expect = 2e-10
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = +1
Query: 547 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQV 660
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQV
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
>AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 130 bits (315), Expect = 5e-30
Identities = 57/81 (70%), Positives = 70/81 (86%)
Frame = +3
Query: 303 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 482
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 483 RRFNGGVGRCAQAKQFGTTQG 545
RR+NGGVGRCAQAKQ+G TQG
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQG 81
Score = 65.7 bits (153), Expect = 2e-10
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = +1
Query: 547 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQV 660
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQV
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
>AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens
cDNA FLJ27083 fis, clone SPL03425. ).
Length = 136
Score = 35.5 bits (78), Expect = 0.25
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +1
Query: 517 KQSSLAQHRXRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQV 660
+ S A++R PK+ F L+ +SNA+ K LD+D L+I+ IQV
Sbjct: 9 RPDSGARYRVAGPKRVLNFCCTCLK-MQSNAEFKVLDIDSLIIEPIQV 55
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,062,581
Number of Sequences: 237096
Number of extensions: 2241097
Number of successful extensions: 3750
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3750
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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