Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_P09
         (906 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    24   1.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   2.7  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   5.7  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    22   7.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   7.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   7.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   7.6  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   7.6  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -1

Query: 228 YSKRYYAIDSVLACLTFFFHRIYSFSKGQSEHFC 127
           +S R   + S + CL  F HR   F   +++ FC
Sbjct: 11  HSVRIVFVQSEIFCLVNFNHRESYFRLSKAKSFC 44


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect(2) = 2.7
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 374 LNCFYYYCCFFV 339
           L C YY+ C F+
Sbjct: 143 LLCIYYFYCAFI 154



 Score = 20.6 bits (41), Expect(2) = 2.7
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -2

Query: 365 FYYYCCFFVGTHSCGILIMSXH 300
           +Y+YC F + T     L+   H
Sbjct: 147 YYFYCAFIIFTVHLLFLLCIYH 168


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 117 LVNRKNVQIALWRKSRSDGRKTSS 188
           ++    V +ALW + R  GRK  S
Sbjct: 50  VIGNSTVLLALWTRRRYAGRKKLS 73


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -1

Query: 282 LKTTMFQYQGSDSYNCTHYSKRYYAI 205
           LKT M  + G   Y C H  +++  +
Sbjct: 25  LKTHMRLHTGERPYRCEHCDRQFVQV 50


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 374 LNCFYYYCCFFVGTHSCGILIMS 306
           +N    Y C+  G  SC ++I S
Sbjct: 137 INISATYICYAFGKFSCKVMIQS 159


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 374 LNCFYYYCCFFVGTHSCGILIMS 306
           +N    Y C+  G  SC ++I S
Sbjct: 370 INISATYICYAFGKFSCKVMIQS 392


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 374 LNCFYYYCCFFVGTHSCGILIMS 306
           +N    Y C+  G  SC ++I S
Sbjct: 370 INISATYICYAFGKFSCKVMIQS 392


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -1

Query: 282 LKTTMFQYQGSDSYNCTHYSKRYYAI 205
           LKT M  + G   Y C H  +++  +
Sbjct: 178 LKTHMRLHTGERPYRCEHCDRQFVQV 203


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,752
Number of Sequences: 336
Number of extensions: 1828
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25237652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)