Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_P06
         (876 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0016 + 16461542-16461566,16462701-16462732,16463015-164631...    48   7e-06
07_03_1260 - 25260872-25261101,25261199-25261312,25261473-252615...    47   2e-05
07_03_1580 + 27888275-27888360,27888755-27888871,27888964-278890...    45   7e-05
07_01_0243 - 1783903-1784658                                           29   4.9  
08_02_1070 - 24106152-24106967                                         28   8.5  

>03_04_0016 +
           16461542-16461566,16462701-16462732,16463015-16463100,
           16463189-16463305,16463399-16463474,16463695-16463818,
           16464482-16464595,16464700-16464947
          Length = 273

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 28/58 (48%), Positives = 35/58 (60%)
 Frame = +1

Query: 652 RLAAYNAKKAKKPVLIAKSNIILDVXPWDDETDMAALETSCKVNQH*WPLVGCAKLVP 825
           R AA  A   KK     KS+++LDV PWDDETDMA LE + +  +    L G +KLVP
Sbjct: 141 RAAAVKASGKKKES--GKSSVLLDVKPWDDETDMAKLEEAVRNVKMEGLLWGASKLVP 196


>07_03_1260 -
           25260872-25261101,25261199-25261312,25261473-25261596,
           25261755-25261839,25261917-25262033,25262122-25262207
          Length = 251

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 27/58 (46%), Positives = 34/58 (58%)
 Frame = +1

Query: 652 RLAAYNAKKAKKPVLIAKSNIILDVXPWDDETDMAALETSCKVNQH*WPLVGCAKLVP 825
           R AA  A   KK     KS+++LDV PWDDETDM  LE + +  +    L G +KLVP
Sbjct: 125 RAAAVKASGKKKES--GKSSVLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVP 180


>07_03_1580 +
           27888275-27888360,27888755-27888871,27888964-27889045,
           27889710-27889821,27889958-27890071,27890163-27890326
          Length = 224

 Score = 45.2 bits (102), Expect = 7e-05
 Identities = 23/52 (44%), Positives = 31/52 (59%)
 Frame = +1

Query: 670 AKKAKKPVLIAKSNIILDVXPWDDETDMAALETSCKVNQH*WPLVGCAKLVP 825
           +K + K     KS+++LDV PWDDETDM  LE + +  Q      G +KLVP
Sbjct: 124 SKASSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLTWGASKLVP 175


>07_01_0243 - 1783903-1784658
          Length = 251

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +2

Query: 476 ACKSVLKPWNHPAVSPLIVFNQKNLQQLLLIRMTKMMMLI 595
           +C S++ P   P + PL+  +Q +L++LLL   + MM+L+
Sbjct: 59  SCPSLVPP---PRLLPLVPLHQSHLRRLLLSLTSSMMVLV 95


>08_02_1070 - 24106152-24106967
          Length = 271

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 768 CFQGCHISLIIPWLYIQNNIRLC 700
           C  G H   I+PWL ++N+  LC
Sbjct: 227 CSHGYHEECIMPWLDVRNSCPLC 249


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,297,871
Number of Sequences: 37544
Number of extensions: 304214
Number of successful extensions: 593
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)