Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_P04
         (916 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937...    33   0.24 
07_01_0463 + 3502708-3503535                                           32   0.73 
02_04_0103 - 19768288-19768737                                         31   0.97 
07_03_1707 + 28866054-28866065,28866185-28866269,28866398-28867149     29   3.9  
10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266     28   9.0  

>02_04_0516 +
           23593088-23593116,23593209-23593336,23593527-23593714,
           23593861-23593919,23594997-23595345,23596081-23596333,
           23596404-23597476
          Length = 692

 Score = 33.5 bits (73), Expect = 0.24
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = +1

Query: 295 REKXKXXKKKGXXXKKKGXXXKKXGGRKXXXKXKKKKKRXXXPXGK 432
           ++K K  KKK    KKK     K   +K   K KKKKK+   P  K
Sbjct: 68  KKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKRWPSNK 113



 Score = 30.7 bits (66), Expect = 1.7
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +1

Query: 286 EEXREKXKXXKKKGXXXKKKGXXXKKXGGRKXXXKXKKKKK 408
           ++ ++K K  KKK    KKK    KK   +K   K KKKK+
Sbjct: 68  KKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKR 108



 Score = 29.9 bits (64), Expect = 2.9
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +1

Query: 337 KKKGXXXKKXGGRKXXXKXKKKKKRXXXPXGKNXKKKK 450
           KKK    KK   +K   K KKKKK+      K  KKK+
Sbjct: 71  KKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKR 108



 Score = 29.1 bits (62), Expect = 5.2
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = +1

Query: 337 KKKGXXXKKXGGRKXXXKXKKKKKRXXXPXGKNXKKKK 450
           KKK    KK   +K   K KK KK+      K  KKKK
Sbjct: 68  KKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKK 105



 Score = 29.1 bits (62), Expect = 5.2
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = +1

Query: 337 KKKGXXXKKXGGRKXXXKXKKKKKRXXXPXGKNXKKKK 450
           KKK    KK   +K   K K KKK+      K  KKKK
Sbjct: 69  KKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKK 106



 Score = 29.1 bits (62), Expect = 5.2
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = +1

Query: 337 KKKGXXXKKXGGRKXXXKXKKKKKRXXXPXGKNXKKKK 450
           KKK    KK   +K   K  KKKK+      K  KKKK
Sbjct: 70  KKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKK 107


>07_01_0463 + 3502708-3503535
          Length = 275

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +1

Query: 295 REKXKXXKKKGXXXKKKGXXXKKXGGRKXXXKXKKKK-KRXXXPXGKNXKKK 447
           +EK    KKK    KK+    KK G  +   K +KKK K      GK  KKK
Sbjct: 105 KEKEMKEKKKDKSDKKEEGKKKKDGDEEEGKKKEKKKDKDGDEKEGKKEKKK 156


>02_04_0103 - 19768288-19768737
          Length = 149

 Score = 31.5 bits (68), Expect = 0.97
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +1

Query: 295 REKXKXXKKKGXXXKKKGXXXKKXGGRKXXXKXKKKKKR 411
           REK +  +K+    KKK    KK   +K   K KKKKK+
Sbjct: 101 REKRRRKRKRKRKKKKKKKKKKKKKKKKKKKKKKKKKKK 139



 Score = 29.1 bits (62), Expect = 5.2
 Identities = 18/41 (43%), Positives = 21/41 (51%)
 Frame = +1

Query: 286 EEXREKXKXXKKKGXXXKKKGXXXKKXGGRKXXXKXKKKKK 408
           E+ R K K  +KK    KKK    KK   +K   K KKKKK
Sbjct: 102 EKRRRKRKRKRKKKKKKKKKKKKKKK---KKKKKKKKKKKK 139



 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +1

Query: 325 GXXXKKKGXXXKKXGGRKXXXKXKKKKKRXXXPXGKNXKKKK 450
           G   +K+    K+   +K   K KKKKK+      K  KKKK
Sbjct: 98  GPMREKRRRKRKRKRKKKKKKKKKKKKKKKKKKKKKKKKKKK 139


>07_03_1707 + 28866054-28866065,28866185-28866269,28866398-28867149
          Length = 282

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +1

Query: 286 EEXREKXKXXKKKGXXXKKKGXXXKKXGGRKXXXKXKKKK 405
           ++  EK    KKK    KKKG   K   G+K   K +K K
Sbjct: 99  KQPEEKKPEEKKKSEEEKKKGDEKKPEEGKKEEKKEEKPK 138


>10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266
          Length = 60

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 288 RXERKKXXXKKKRXXXKKKGKXXKKXXGE 374
           + ++KK   KKK+   KKK K  KK  GE
Sbjct: 32  KKKKKKKKKKKKKKKKKKKKKKKKKLLGE 60


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,338,347
Number of Sequences: 37544
Number of extensions: 94446
Number of successful extensions: 820
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 337
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)