Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_O23
(897 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41534-6|AAB47598.1| 375|Caenorhabditis elegans Hypothetical pr... 94 1e-19
Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical pr... 41 0.001
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ... 37 0.022
Z35663-13|CAA84729.1| 234|Caenorhabditis elegans Hypothetical p... 32 0.48
AF000263-13|AAO21393.1| 695|Caenorhabditis elegans Hypothetical... 32 0.48
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 32 0.48
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 32 0.48
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 32 0.48
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 32 0.48
Z77663-17|CAB54256.5| 500|Caenorhabditis elegans Hypothetical p... 31 0.85
U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plu... 31 0.85
AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein. 31 0.85
AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein. 31 0.85
AL021346-4|CAB54259.5| 500|Caenorhabditis elegans Hypothetical ... 31 0.85
Z81588-3|CAB04715.2| 377|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical pr... 25 3.2
AF039710-9|AAB96685.2| 172|Caenorhabditis elegans Hypothetical ... 29 3.4
AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical ... 29 3.4
AC006790-4|AAF60732.1| 193|Caenorhabditis elegans Hypothetical ... 29 3.4
AL132902-10|CAB82002.1| 286|Caenorhabditis elegans Hypothetical... 29 4.5
AL031624-2|CAA20942.1| 244|Caenorhabditis elegans Hypothetical ... 29 4.5
AL021180-2|CAA15981.2| 188|Caenorhabditis elegans Hypothetical ... 29 4.5
AC024824-2|AAK85502.1| 740|Caenorhabditis elegans Hypothetical ... 29 4.5
Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical pr... 29 6.0
U97403-8|AAB52470.1| 720|Caenorhabditis elegans Hypothetical pr... 29 6.0
U41026-6|AAA82353.1| 1081|Caenorhabditis elegans Hypothetical pr... 29 6.0
AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical ... 29 6.0
AL110501-2|CAE47474.1| 1271|Caenorhabditis elegans Hypothetical ... 29 6.0
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 29 6.0
Z81496-13|CAB04075.1| 365|Caenorhabditis elegans Hypothetical p... 28 7.9
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 28 7.9
AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical ... 28 7.9
AL031627-26|CAA20972.1| 365|Caenorhabditis elegans Hypothetical... 28 7.9
>U41534-6|AAB47598.1| 375|Caenorhabditis elegans Hypothetical
protein C16A3.4 protein.
Length = 375
Score = 94.3 bits (224), Expect = 1e-19
Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 2/206 (0%)
Frame = +2
Query: 269 TMFSCITCKVLFNTSELQREHYKLDWHRYNLKRKVASIEPVTLXXXXXXXXXXXXSQN-- 442
T F+C+TC+V+F T+ELQR+HYK +WHRYNLKR+ A + + + ++
Sbjct: 5 TGFTCVTCRVVFETAELQRDHYKTEWHRYNLKRQAAELPAIGIELFNEKAASFNPTKPVV 64
Query: 443 EKQDDSQYCQCCSKLFSTKNSYNNHLNSKKHKVSVEKYTESQKDQENSGQSDTDSFVKVE 622
+ YC+ C K ++N+ +H+ SKKHK + +K + K + ++ K
Sbjct: 65 AASVEPLYCKACRKSIKSENAMTDHVASKKHKENEKKIEDDVKKGPKQPRKKPENLPK-- 122
Query: 623 CTTGLTNERSKFVVVNTTDSGEDIETDSEIEELDSDEWDECRIQESDSLIKPRDCLFCVH 802
E K + D ETD E E ++ + E D+L CLFC
Sbjct: 123 -----KPESLKEPENDEDDDSSGWETDDEEEGVE-------ELNEDDAL-PVTSCLFCPQ 169
Query: 803 HX*EYGKNLKHMSEAHSFFXPDVEFV 880
+ HM+ H F PD +++
Sbjct: 170 TKPNMDEMRTHMNFHHGFQLPDRQYL 195
>Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical
protein T03F6.2 protein.
Length = 510
Score = 41.1 bits (92), Expect = 0.001
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Frame = +2
Query: 440 NEKQDDSQYCQCCSKLFSTKNSYNNHLNSKKHKVSVEKYTESQKDQENSGQSDTDSFVKV 619
+E+ ++ YC CSK F T N+ NH NSK+H + + + K+++++ ++ +
Sbjct: 309 DEEGEELPYCVVCSKSFKTVNAKLNHENSKQHIRQLNELKKHMKEEDSTIFTEAEP-KPD 367
Query: 620 ECTTGLTNERSKFVVVNTTDSGEDIE-TDSEIEELDSDEWDECRIQESD 763
E G N+R N E+ E ++EI+E E ++ +E +
Sbjct: 368 ETPKGKKNKRKDRKKGNGIFDVEETEAVEAEIQEAPPVENEQPEEEEKE 416
>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
protein ZC123.3 protein.
Length = 1623
Score = 36.7 bits (81), Expect = 0.022
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 467 CQCCSKLFSTKNSYNNHLNSKKHKVSVEKYTESQKDQENS 586
C+ CS+ F+TK ++ +HLNS +H +K E+ NS
Sbjct: 534 CEMCSETFATKEAFLSHLNSARHLQQAKKQLENSLVDLNS 573
Score = 28.3 bits (60), Expect = 7.9
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +2
Query: 464 YCQCCSKLFSTKNSYNNHLNSKKH 535
+C+ C K F+T+ S +HL +++H
Sbjct: 1418 HCEICDKTFATRLSLQDHLFAEQH 1441
>Z35663-13|CAA84729.1| 234|Caenorhabditis elegans Hypothetical
protein T04A8.10 protein.
Length = 234
Score = 32.3 bits (70), Expect = 0.48
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 443 EKQDDSQYCQCCSKLFSTKNSYNNHLNSKKHKVSVEKY-TESQKDQENSGQSDTD 604
+K + + C C+ K + H+N KKH+ S+EK T +QK + S +TD
Sbjct: 10 QKPNGNIQCLVCNAEIKPK-IWTAHVNGKKHRDSIEKLKTSAQKRGKESSTRNTD 63
>AF000263-13|AAO21393.1| 695|Caenorhabditis elegans Hypothetical
protein T08B2.5g protein.
Length = 695
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 257 LHNMTMFSCITCKVLFNTSELQREHY-KLDWHRYNLKRKVA 376
L++ T +C+ CK F+ E+ R+H K D HR NL+ K A
Sbjct: 505 LYDETKKTCMLCKRAFSDVEVLRKHVEKSDLHRNNLEAKRA 545
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 257 LHNMTMFSCITCKVLFNTSELQREHY-KLDWHRYNLKRKVA 376
L++ T +C+ CK F+ E+ R+H K D HR NL+ K A
Sbjct: 648 LYDETKKTCMLCKRAFSDVEVLRKHVEKSDLHRNNLEAKRA 688
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 257 LHNMTMFSCITCKVLFNTSELQREHY-KLDWHRYNLKRKVA 376
L++ T +C+ CK F+ E+ R+H K D HR NL+ K A
Sbjct: 676 LYDETKKTCMLCKRAFSDVEVLRKHVEKSDLHRNNLEAKRA 716
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 257 LHNMTMFSCITCKVLFNTSELQREHY-KLDWHRYNLKRKVA 376
L++ T +C+ CK F+ E+ R+H K D HR NL+ K A
Sbjct: 734 LYDETKKTCMLCKRAFSDVEVLRKHVEKSDLHRNNLEAKRA 774
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 257 LHNMTMFSCITCKVLFNTSELQREHY-KLDWHRYNLKRKVA 376
L++ T +C+ CK F+ E+ R+H K D HR NL+ K A
Sbjct: 735 LYDETKKTCMLCKRAFSDVEVLRKHVEKSDLHRNNLEAKRA 775
>Z77663-17|CAB54256.5| 500|Caenorhabditis elegans Hypothetical
protein F53F4.14 protein.
Length = 500
Score = 31.5 bits (68), Expect = 0.85
Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Frame = +2
Query: 539 VSVEKYTESQKDQENSGQSDTDSFVKVECTTGLTNERS----KFVVVNTTDSGEDIETDS 706
+ +++ + K+QEN D D V E T L N+R K + + G + +
Sbjct: 271 LEMKRNSRKSKEQENKNDEDEDDDVNAEDVTDLFNDRGGRKRKIAAPSIGEDGGNKRIND 330
Query: 707 EIEELDSDEWDECRIQESDSL 769
E ++ + D +E +E +++
Sbjct: 331 ESDDSEDDSENEVDPEELEAI 351
>U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plus
homeodomain, axonguidance protein 1 protein.
Length = 596
Score = 31.5 bits (68), Expect = 0.85
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 467 CQCCSKLFSTKNSYNNHLNSKK 532
CQ C K FS SY++H++SKK
Sbjct: 54 CQQCHKRFSHSGSYSSHMSSKK 75
>AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 31.5 bits (68), Expect = 0.85
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 467 CQCCSKLFSTKNSYNNHLNSKK 532
CQ C K FS SY++H++SKK
Sbjct: 54 CQQCHKRFSHSGSYSSHMSSKK 75
>AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 31.5 bits (68), Expect = 0.85
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 467 CQCCSKLFSTKNSYNNHLNSKK 532
CQ C K FS SY++H++SKK
Sbjct: 54 CQQCHKRFSHSGSYSSHMSSKK 75
>AL021346-4|CAB54259.5| 500|Caenorhabditis elegans Hypothetical
protein F53F4.14 protein.
Length = 500
Score = 31.5 bits (68), Expect = 0.85
Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Frame = +2
Query: 539 VSVEKYTESQKDQENSGQSDTDSFVKVECTTGLTNERS----KFVVVNTTDSGEDIETDS 706
+ +++ + K+QEN D D V E T L N+R K + + G + +
Sbjct: 271 LEMKRNSRKSKEQENKNDEDEDDDVNAEDVTDLFNDRGGRKRKIAAPSIGEDGGNKRIND 330
Query: 707 EIEELDSDEWDECRIQESDSL 769
E ++ + D +E +E +++
Sbjct: 331 ESDDSEDDSENEVDPEELEAI 351
>Z81588-3|CAB04715.2| 377|Caenorhabditis elegans Hypothetical
protein T07D10.3 protein.
Length = 377
Score = 31.1 bits (67), Expect = 1.1
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +2
Query: 467 CQCCSKLFSTKNSYNNHLNSKKH 535
C CC++ +S++N Y HL+ + H
Sbjct: 159 CNCCNRTWSSRNEYVAHLHGRDH 181
>Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical
protein F35H8.3 protein.
Length = 422
Score = 25.4 bits (53), Expect(2) = 3.2
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 272 MFSCITCKVLFNTSELQREHYKLDWHR 352
MFSC C +F+ E + H+K+ + R
Sbjct: 228 MFSCDYCPRIFSKLESKTRHHKMHFTR 254
Score = 22.6 bits (46), Expect(2) = 3.2
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = +2
Query: 467 CQCCSKLFSTKNSYNNH 517
CQ C + F+T+++ +H
Sbjct: 257 CQTCMRFFTTEDALRHH 273
>AF039710-9|AAB96685.2| 172|Caenorhabditis elegans Hypothetical
protein C46E10.8 protein.
Length = 172
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 467 CQCCSKLFSTKNSYNNHLNSKKHKVSVEKY 556
C+ CS++++++ S +HL S K+ V Y
Sbjct: 31 CKACSRIYASRKSLKSHLKSYKYAREVAGY 60
>AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical
protein ZK973.2 protein.
Length = 865
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 683 GEDIETDSEIEELDSDEWDECRIQE 757
GE+ E D E EE+D D W ++QE
Sbjct: 32 GEEDEEDEEEEEIDEDHWVVEKVQE 56
>AC006790-4|AAF60732.1| 193|Caenorhabditis elegans Hypothetical
protein Y49F6B.5 protein.
Length = 193
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 48 KILKFVG-SXHSFFKICRNCTKLKHLQSTPPSKAKT 152
++LKF+ ++C NC+ LK L ST P + +T
Sbjct: 36 EVLKFLPIRIRQHLQLCSNCSNLKRLDSTTPYQLET 71
>AL132902-10|CAB82002.1| 286|Caenorhabditis elegans Hypothetical
protein Y71A12B.11 protein.
Length = 286
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/82 (19%), Positives = 38/82 (46%)
Frame = +2
Query: 518 LNSKKHKVSVEKYTESQKDQENSGQSDTDSFVKVECTTGLTNERSKFVVVNTTDSGEDIE 697
L+ + + S ++ + + E S S+ + +V+ CT L + + D + E
Sbjct: 161 LDDSESEASDVSESKDESESEGSDDSEDEEYVEETCTDALNQLEPE---SDAADESVEEE 217
Query: 698 TDSEIEELDSDEWDECRIQESD 763
+ + + DSD+ D+ +E++
Sbjct: 218 EEEDEDSDDSDDSDDSEEEEAE 239
>AL031624-2|CAA20942.1| 244|Caenorhabditis elegans Hypothetical
protein H16D19.3 protein.
Length = 244
Score = 29.1 bits (62), Expect = 4.5
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +2
Query: 467 CQCCSKLFSTKNSYNNHLNSKKH 535
C CC++ +S+++ Y HL+ + H
Sbjct: 147 CNCCNRTWSSRSEYVAHLHGRDH 169
>AL021180-2|CAA15981.2| 188|Caenorhabditis elegans Hypothetical
protein F43C1.3 protein.
Length = 188
Score = 29.1 bits (62), Expect = 4.5
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +2
Query: 467 CQCCSKLFSTKNSYNNHLNSKKHKVSVEKYTESQKDQENSGQSDTDSFVKVECTTGLTNE 646
C C L+ T Y N KH EK+ + Q QE SG+ D K E +
Sbjct: 22 CPRCDLLYCTIKCYRN----PKHSECSEKFYQEQVKQELSGKK-ADISQKGE---EYKEK 73
Query: 647 RSKFVVVNTT--DSGEDIETDSEIEELDSDEWDE 742
KF+ + + + GE +++D E E+ D +W +
Sbjct: 74 MQKFLDGDWSGIEEGEPLDSDDE-EQEDVADWQK 106
>AC024824-2|AAK85502.1| 740|Caenorhabditis elegans Hypothetical
protein Y55B1BR.2 protein.
Length = 740
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = +2
Query: 494 TKNSYNNHLNSKKHKVSVEKYTESQKDQENSGQSDTDSFVKVECTTGLTNERSKFVVVNT 673
T+ +++ + KK +V+ S D++ D DS ++V+ E ++ +T
Sbjct: 87 TEITHHEFADLKKGMNNVKSSATSSTDKKRKIGEDEDSQIEVK----RKKESRNYIPPST 142
Query: 674 TDSGEDIETDSEIEELDSDE 733
DSG IEE +SDE
Sbjct: 143 PDSGTHSTESDMIEEPNSDE 162
>Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical
protein F58G1.2 protein.
Length = 445
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 458 SQYCQCCSKLFSTKNSYNNHLNSKKHKVSVE 550
S C C K F S+NNHL +KKH E
Sbjct: 228 SPQCPFCDKRFRNDISFNNHL-TKKHPECAE 257
>U97403-8|AAB52470.1| 720|Caenorhabditis elegans Hypothetical
protein T10E9.2 protein.
Length = 720
Score = 28.7 bits (61), Expect = 6.0
Identities = 8/36 (22%), Positives = 23/36 (63%)
Frame = +2
Query: 668 NTTDSGEDIETDSEIEELDSDEWDECRIQESDSLIK 775
+++ GED+E+++ E + + W+ R+++ L++
Sbjct: 664 SSSSEGEDMESETTTERIAGNNWNNMRLKDIKELVR 699
>U41026-6|AAA82353.1| 1081|Caenorhabditis elegans Hypothetical
protein C28G1.4 protein.
Length = 1081
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 530 KHKVSVEKYTESQKDQENSGQSDT--DSFVKVECTTGLTNERSK 655
+H++S+EK E + + + G S+ DS VK E NE S+
Sbjct: 645 RHEISIEKTLEESRKESSFGNSENGEDSAVKDEQVKKTKNENSQ 688
>AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical
protein Y67H2A.10 protein.
Length = 608
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 458 SQYCQCCSKLFSTKNSYNNHLNSKKHKVS 544
S C CSK + T + +NH+ S K+S
Sbjct: 270 SYKCTYCSKRYKTSSGLSNHMMSSHQKIS 298
>AL110501-2|CAE47474.1| 1271|Caenorhabditis elegans Hypothetical
protein Y79H2A.3b protein.
Length = 1271
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 446 KQDDSQYCQCCSKLFSTKN-SYNNHLNSKKHKVS-VEKYTESQ 568
KQ YCQ C+K+F + + +H+ H + ++KY ++Q
Sbjct: 955 KQQADFYCQLCAKVFPKRAIALESHVREMDHCIYWIQKYRQAQ 997
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 446 KQDDSQYCQCCSKLFSTKN-SYNNHLNSKKHKVS-VEKYTESQ 568
KQ YCQ C+K+F + + +H+ H + ++KY ++Q
Sbjct: 955 KQQADFYCQLCAKVFPKRAIALESHVREMDHCIYWIQKYRQAQ 997
>Z81496-13|CAB04075.1| 365|Caenorhabditis elegans Hypothetical
protein Y102A5C.1 protein.
Length = 365
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 659 VVVNTTDSG-EDIETDSEIEELDSDEWDECRIQESDSLIK 775
+V N S E+IE EI ELD +W + + E DSL+K
Sbjct: 235 IVTNCDSSSFENIEIMKEIVELD--QWKQAKHLEIDSLVK 272
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical
protein F47A4.2 protein.
Length = 3498
Score = 28.3 bits (60), Expect = 7.9
Identities = 24/116 (20%), Positives = 48/116 (41%)
Frame = +2
Query: 443 EKQDDSQYCQCCSKLFSTKNSYNNHLNSKKHKVSVEKYTESQKDQENSGQSDTDSFVKVE 622
E +DD+ + + K+ + ++S K+ E S + E S D V +E
Sbjct: 614 ENEDDTSSKTAKTSTSAEKSEAPSIVDSND-KIDKEPNASSTSNDETS----KDDTVPME 668
Query: 623 CTTGLTNERSKFVVVNTTDSGEDIETDSEIEELDSDEWDECRIQESDSLIKPRDCL 790
E+ K TT+ +++ E+++ + + D+ I ES+ DC+
Sbjct: 669 SDPPAATEKPKESTEITTEEPLEVDKAPEVDKSEKEHEDDIMIIESNKKADEDDCV 724
>AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical
protein Y59A8A.2 protein.
Length = 613
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 677 DSGEDIETDSEIEELDSDEWDECRIQESDSLIKP 778
DSG D + +S+ EE + +E DE + ++S KP
Sbjct: 62 DSGSDSQENSDEEESEDEENDEEEAESAESSEKP 95
>AL031627-26|CAA20972.1| 365|Caenorhabditis elegans Hypothetical
protein Y102A5C.1 protein.
Length = 365
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 659 VVVNTTDSG-EDIETDSEIEELDSDEWDECRIQESDSLIK 775
+V N S E+IE EI ELD +W + + E DSL+K
Sbjct: 235 IVTNCDSSSFENIEIMKEIVELD--QWKQAKHLEIDSLVK 272
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,776,807
Number of Sequences: 27780
Number of extensions: 318519
Number of successful extensions: 1195
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -