Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_O20
         (878 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.     113   3e-27
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          96   4e-22
AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.      34   0.002
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    24   1.6  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    24   1.6  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    24   1.6  
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    23   2.8  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   4.9  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    23   4.9  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   6.5  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              22   8.6  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score =  113 bits (271), Expect = 3e-27
 Identities = 54/122 (44%), Positives = 77/122 (63%)
 Frame = +1

Query: 157 QEISLKWNGYQSNILTNVKELYRDEGLSDVTLVSDGQCFKAHKVILSANSSVFKSIFQQN 336
           Q   L+WN YQS+I +  + L  DE   DVTL  DG+  KAH+V+LSA S  F+ + +  
Sbjct: 5   QHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACDGRSLKAHRVVLSACSPYFRELLKST 64

Query: 337 PHKDPIIVLHDINTASLKTLLTFMYNGEVNVTEEFLPILLKTAEILRVCGLSTGSEAATK 516
           P K P+IVL D+  + L  L+ F+Y+GEVNV +  L   LKTAE+LRV GL+  ++   +
Sbjct: 65  PCKHPVIVLQDVAFSDLHALVEFIYHGEVNVHQRSLSSFLKTAEVLRVSGLTQQADQTDR 124

Query: 517 DD 522
           D+
Sbjct: 125 DE 126


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 95.9 bits (228), Expect = 4e-22
 Identities = 49/115 (42%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
 Frame = +1

Query: 148 MANQEISLKWNGYQSNILTNVKELYRDEGLSDVTLVSDGQCFKAHKVILSANSSVFKSIF 327
           MA Q   L+WN YQSN+ +   +L + E   DVTL  +    KAHKV+LSA SS F+ + 
Sbjct: 6   MAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLL 65

Query: 328 QQNPHKDPIIVL-HDINTASLKTLLTFMYNGEVNVTEEFLPILLKTAEILRVCGL 489
             NP K P I++  D+    LK ++ F+Y GE++V++  L  LLKTA+ L++ GL
Sbjct: 66  LSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGL 120


>AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.
          Length = 39

 Score = 33.9 bits (74), Expect = 0.002
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +1

Query: 157 QEISLKWNGYQSNILTNVKELYRDEGLSDVTLVSD 261
           Q   L+WN YQS+I +  + L  DE   DVTL  +
Sbjct: 5   QHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACE 39


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = -1

Query: 476 LNISAVFNKIGRNSSVTLTSPLYINVNKVFNEAV 375
           +N S +FN +  +   T+   L+   N V+N  V
Sbjct: 297 INFSGIFNLVKISPLFTIWGSLFAKANAVYNPIV 330


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = -3

Query: 120 WYNFVEEIIEKHKST 76
           W+ FV+++ ++HK+T
Sbjct: 404 WHAFVDDVFQEHKNT 418


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +1

Query: 490 STGSEAATKDDEKSAGPVQPKKRKKSEH 573
           ST SE +   +EK+   ++ +KR+KSEH
Sbjct: 757 STSSEESR--EEKATTSLEAEKREKSEH 782


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 476 GYVVCPLGVKLPPKMMRNRLDQYNQKNARKVNMK 577
           G+ V PLG K   K+     +  N+K ++K   K
Sbjct: 115 GHYVLPLGRKRGAKLTEAEEEVLNKKRSKKAEAK 148


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 14/55 (25%), Positives = 22/55 (40%)
 Frame = +1

Query: 538 PVQPKKRKKSEHEDXNNKCKKISTKVETPPNTSITIDASNTSNVVLKVXXLXPPH 702
           P  P+ R++ E E  NN+   I       P      +A   +N  + +    PPH
Sbjct: 111 PPHPRLRREPEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPH 165



 Score = 21.8 bits (44), Expect = 8.6
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
 Frame = +1

Query: 538 PVQPKKRKK--SEHEDXNNKCKKISTKVETPPNTSITIDASNTSNVVLKVXXLXPPHRLF 711
           P  P+ R++  SE E  NN+   I       P      +A   +N  + +    PPH   
Sbjct: 83  PPHPRLRREAESEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHPRL 142

Query: 712 RR 717
           RR
Sbjct: 143 RR 144


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 145 NMANQEISLKWNGYQSNILTNVKELY 222
           N  N   +  +N Y +N   N K+LY
Sbjct: 328 NYNNNNYNNNYNNYNNNNYNNYKKLY 353


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 397 LTFMYNGEVNVTEEFLPI 450
           +TF  NG  N T  F+P+
Sbjct: 215 MTFAQNGPFNTTTIFVPV 232


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 376 TASLKTLLTFMYNGEVNVTEE 438
           T + + ++  +YNG VNV +E
Sbjct: 37  TGTSQKIIDEVYNGNVNVEDE 57


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,818
Number of Sequences: 438
Number of extensions: 4370
Number of successful extensions: 30
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)