Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_O19
         (853 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1199 - 9657169-9657254,9657369-9657395,9657485-9657553,965...   159   2e-39
05_05_0300 + 23932947-23933196,23934022-23934123,23934249-239343...   154   1e-37
01_06_1103 - 34543915-34543955,34544069-34544137,34544294-345443...   149   3e-36
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929...    29   4.7  
03_05_0830 + 28034179-28035492                                         29   4.7  
05_04_0299 - 19958776-19958858,19958883-19959012,19960131-199601...    28   8.2  

>01_01_1199 -
           9657169-9657254,9657369-9657395,9657485-9657553,
           9657922-9658023,9659895-9660000,9660145-9660165
          Length = 136

 Score =  159 bits (387), Expect = 2e-39
 Identities = 72/100 (72%), Positives = 85/100 (85%)
 Frame = +3

Query: 126 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 305
           MVAAKK KK+ ++IN++L LVMKSGKY LGYK  L+TLR  KAKLVII+ N PPLRKSEI
Sbjct: 1   MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVIISNNCPPLRKSEI 60

Query: 306 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPG 425
           EYYA+LAK  VHH+ GNN++LGTACGKY+RVC L+I DPG
Sbjct: 61  EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPG 100


>05_05_0300 +
           23932947-23933196,23934022-23934123,23934249-23934317,
           23934406-23934446
          Length = 153

 Score =  154 bits (373), Expect = 1e-37
 Identities = 68/99 (68%), Positives = 80/99 (80%)
 Frame = +3

Query: 129 VAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIE 308
           V A  QKK+ ++IN++L LVMKSGKY LGYK  LKTLR  K KL+I+A N PPLRKSEIE
Sbjct: 43  VVAMMQKKSTDNINNKLQLVMKSGKYTLGYKTVLKTLRNSKGKLIILANNCPPLRKSEIE 102

Query: 309 YYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPG 425
           YYA+L K  VHH+ GNN++LGTACGKYYRVC L+I DPG
Sbjct: 103 YYAMLGKVSVHHFHGNNVDLGTACGKYYRVCCLSIIDPG 141


>01_06_1103 -
           34543915-34543955,34544069-34544137,34544294-34544395,
           34545603-34545708,34545998-34546079,34546850-34547142
          Length = 230

 Score =  149 bits (361), Expect = 3e-36
 Identities = 65/93 (69%), Positives = 76/93 (81%)
 Frame = +3

Query: 147 KKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA 326
           KK  E IN++L LVMKSGKY LGYK  LKTLR  K KLVI+A N PPLRKSEIEYYA+L 
Sbjct: 126 KKNAEGINNKLQLVMKSGKYTLGYKTVLKTLRNSKGKLVIVANNCPPLRKSEIEYYAMLG 185

Query: 327 KTGVHHYSGNNIELGTACGKYYRVCTLAITDPG 425
           K  V+H++GNN++LGTACGKYYRVC L++ DPG
Sbjct: 186 KVSVYHFNGNNVDLGTACGKYYRVCCLSVVDPG 218


>06_01_1127 +
           9294079-9294193,9294300-9294369,9294611-9294716,
           9295665-9295805,9296377-9296475
          Length = 176

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
 Frame = +3

Query: 177 LALVMKSGKY-CL--GYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTG--VH 341
           L LV ++ +  CL  G K+ +K++R+G+  L IIA N  P+    I +  +L +     +
Sbjct: 33  LKLVRRASEAKCLKRGVKEVVKSIRRGQKGLCIIAGNISPI--DVITHVPILCEEANIPY 90

Query: 342 HYSGNNIELGTA-CGKYYRVCTLAITDP 422
            Y  +  +L TA   K    C L +T P
Sbjct: 91  VYVPSKEDLATAGTTKRPTCCVLVLTKP 118


>03_05_0830 + 28034179-28035492
          Length = 437

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 195 SGKYCLGYKQTLKTLRQGKAKLVIIAKN 278
           +GKY  G   TLKTL  G  + +I+ +N
Sbjct: 299 TGKYVFGVDDTLKTLEMGAVETLIVWEN 326


>05_04_0299 -
           19958776-19958858,19958883-19959012,19960131-19960175,
           19960252-19960370,19960450-19960543,19961824-19961985,
           19962117-19962266,19962472-19962537,19962934-19962981,
           19963654-19963866,19963953-19964078,19964155-19964232,
           19964600-19964671,19965522-19965953,19966863-19966925,
           19967497-19967898
          Length = 760

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +1

Query: 79  SICALGEDSLAFTLPKWLQQRNRKRPSSQLTPALPW 186
           S+  L   +++  LP  LQ  N  RPS  LT ALPW
Sbjct: 7   SVSVLHLPAISLPLP-CLQGSNPSRPSLGLTNALPW 41


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,325,205
Number of Sequences: 37544
Number of extensions: 253161
Number of successful extensions: 518
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)