Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_O16
(942 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 34 0.13
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.17
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.17
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.17
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.22
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.22
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.22
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 33 0.30
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.52
U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protei... 32 0.68
U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protei... 32 0.68
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 31 0.90
U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical pr... 31 0.90
U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical pr... 31 0.90
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 31 1.2
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 31 1.2
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 1.5
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 1.5
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 31 1.6
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 31 1.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.6
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 30 2.1
U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protei... 30 2.1
U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protei... 30 2.8
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 30 2.8
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 30 2.8
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 4.8
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 29 4.8
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 29 4.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 6.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 6.4
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 6.4
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 8.4
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 28 8.4
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 28 8.4
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 28 8.4
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 34.3 bits (75), Expect = 0.13
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +1
Query: 694 KGXPPXGR----PXKKXPPPXXGGGPPXGGNXKXTRGXPP 801
+G PP R P + PPP GGGPP G RG PP
Sbjct: 1465 RGGPPPPRGMNSPMRGMPPPMRGGGPPMRGG-PPMRGGPP 1503
Score = 32.3 bits (70), Expect = 0.52
Identities = 18/48 (37%), Positives = 20/48 (41%)
Frame = +2
Query: 632 RGXPPGARXPXXGXXFVGXFPRAPPPXXGPXKXXPPPVXGGXXPXEGI 775
RG P G P G G PPP G PPP+ GG P G+
Sbjct: 1552 RGPPMGGLPPPHGG-MNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGM 1598
Score = 31.9 bits (69), Expect = 0.68
Identities = 25/79 (31%), Positives = 27/79 (34%), Gaps = 3/79 (3%)
Frame = +1
Query: 283 PPPXXGGEKXXLLGEXGGXXAFWXPLXAGEKXXXPPLXXXFFFPXXGGGX---GGXFPXK 453
PPP GG + G G PL PP P G GG P +
Sbjct: 1436 PPPVMGGHEGSWRG--GPPMRGMPPLGMMRGRGGPPPPRGMNSPMRGMPPPMRGGGPPMR 1493
Query: 454 XPPPXXGGGXXFXGPPXGP 510
PP GG F G P GP
Sbjct: 1494 GGPPMRGGPPMFRGGPPGP 1512
Score = 31.5 bits (68), Expect = 0.90
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +2
Query: 632 RGXPPGARXPXXGXXFVGXFPRAPPPXXGPXKXXPPPVXGGXXPXEG 772
RG PP P G P P P + PPP+ GG P G
Sbjct: 1448 RGGPPMRGMPPLGMMRGRGGPPPPRGMNSPMRGMPPPMRGGGPPMRG 1494
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/58 (37%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
Frame = +2
Query: 602 GXPP--GKTFFXRGXPPGARXPXXGXXFVGXFPR--APPPXXGPXKXXPPPVXGGXXP 763
G PP G RG PP P G G P PPP G PPP GG P
Sbjct: 1558 GLPPPHGGMNGWRGGPP---PPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPPP 1612
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 735 PPXXGGGXXPXREXXXXPGXPPGXPPXAPPXXPPRG 842
PP GG P P PPG P PP PP G
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 32.3 bits (70), Expect = 0.52
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +2
Query: 608 PPGKTFFXRGXPPGARXPXXGXXFVGXFPRAPPPXXGPXKXXPPPVXGG 754
PPG G PP P G P PPP G PPP GG
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 29.9 bits (64), Expect = 2.8
Identities = 25/79 (31%), Positives = 25/79 (31%), Gaps = 8/79 (10%)
Frame = -2
Query: 479 PPPXXGGGXXXGKXPPXPPP------XXGKKKXXXRGGXXFFSPAXRGXQKAXXPPXSPK 318
PPP G G PP PPP G GG P G PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG---LPPISGGPPPPPPPPGGCP 769
Query: 317 XXXFSPPXXG--GGPXPXP 267
PP G GGP P P
Sbjct: 770 PPPPPPPPGGFKGGPPPPP 788
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = +3
Query: 735 PPXXGGGXXPXREXXXXPGXPPGXPPXA---PPXXPPRG 842
PP GG P P P G PP + PP PP G
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Frame = +3
Query: 735 PPXXGGGXXPXREXXXXPGXPPGXPP----XAPPXXPPRGV 845
PP GG P P PP PP PP PP G+
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGM 792
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 608 PPGKTFFXRGXPPGARXPXXGXXFVGXFPRAPPPXXGPXKXXPPP 742
PPG G PP P G P PPP G K PPP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCP-----PPPPPPPPGGFKGGPPP 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 735 PPXXGGGXXPXREXXXXPGXPPGXPPXAPPXXPPRG 842
PP GG P P PPG P PP PP G
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 32.3 bits (70), Expect = 0.52
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +2
Query: 608 PPGKTFFXRGXPPGARXPXXGXXFVGXFPRAPPPXXGPXKXXPPPVXGG 754
PPG G PP P G P PPP G PPP GG
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 29.9 bits (64), Expect = 2.8
Identities = 25/79 (31%), Positives = 25/79 (31%), Gaps = 8/79 (10%)
Frame = -2
Query: 479 PPPXXGGGXXXGKXPPXPPP------XXGKKKXXXRGGXXFFSPAXRGXQKAXXPPXSPK 318
PPP G G PP PPP G GG P G PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG---LPPISGGPPPPPPPPGGCP 769
Query: 317 XXXFSPPXXG--GGPXPXP 267
PP G GGP P P
Sbjct: 770 PPPPPPPPGGFKGGPPPPP 788
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = +3
Query: 735 PPXXGGGXXPXREXXXXPGXPPGXPPXA---PPXXPPRG 842
PP GG P P P G PP + PP PP G
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Frame = +3
Query: 735 PPXXGGGXXPXREXXXXPGXPPGXPP----XAPPXXPPRGV 845
PP GG P P PP PP PP PP G+
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGM 792
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 608 PPGKTFFXRGXPPGARXPXXGXXFVGXFPRAPPPXXGPXKXXPPP 742
PPG G PP P G P PPP G K PPP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCP-----PPPPPPPPGGFKGGPPP 786
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 735 PPXXGGGXXPXREXXXXPGXPPGXPPXAPPXXPPRG 842
PP GG P P PPG P PP PP G
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 32.3 bits (70), Expect = 0.52
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +2
Query: 608 PPGKTFFXRGXPPGARXPXXGXXFVGXFPRAPPPXXGPXKXXPPPVXGG 754
PPG G PP P G P PPP G PPP GG
Sbjct: 314 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 29.9 bits (64), Expect = 2.8
Identities = 25/79 (31%), Positives = 25/79 (31%), Gaps = 8/79 (10%)
Frame = -2
Query: 479 PPPXXGGGXXXGKXPPXPPP------XXGKKKXXXRGGXXFFSPAXRGXQKAXXPPXSPK 318
PPP G G PP PPP G GG P G PP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG---LPPISGGPPPPPPPPGGCP 352
Query: 317 XXXFSPPXXG--GGPXPXP 267
PP G GGP P P
Sbjct: 353 PPPPPPPPGGFKGGPPPPP 371
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = +3
Query: 735 PPXXGGGXXPXREXXXXPGXPPGXPPXA---PPXXPPRG 842
PP GG P P P G PP + PP PP G
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Frame = +3
Query: 735 PPXXGGGXXPXREXXXXPGXPPGXPP----XAPPXXPPRGV 845
PP GG P P PP PP PP PP G+
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGM 375
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 608 PPGKTFFXRGXPPGARXPXXGXXFVGXFPRAPPPXXGPXKXXPPP 742
PPG G PP P G P PPP G K PPP
Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCP-----PPPPPPPPGGFKGGPPP 369
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.22
Identities = 22/71 (30%), Positives = 22/71 (30%)
Frame = -2
Query: 479 PPPXXGGGXXXGKXPPXPPPXXGKKKXXXRGGXXFFSPAXRGXQKAXXPPXSPKXXXFSP 300
PPP G G P PPP G G P G PP P P
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSP---PPPPTG-----SPPPPPAGGSPPP 291
Query: 299 PXXGGGPXPXP 267
P G P P P
Sbjct: 292 PRAGSPPPPPP 302
Score = 33.1 bits (72), Expect = 0.30
Identities = 23/75 (30%), Positives = 23/75 (30%)
Frame = -2
Query: 479 PPPXXGGGXXXGKXPPXPPPXXGKKKXXXRGGXXFFSPAXRGXQKAXXPPXSPKXXXFSP 300
PPP G PPP G R G P RG P P SP
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP--PPQAGGSP 321
Query: 299 PXXGGGPXPXPXXXK 255
P G G P P K
Sbjct: 322 PPAGTGSPPPPPRQK 336
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 682 GXFPKGXPPXGRPXKKXPPPXXGGGPPXGGNXKXTRGXP 798
G P G PP GRP + PP G PP G + R P
Sbjct: 414 GSPPTGSPPTGRPPRGSPPT---GSPPTGLPSRQKRQAP 449
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = +1
Query: 691 PKGXPPXGRPXKKXPPPXXGGGPP--XGGNXKXTRGXPP 801
PKG PP PPP G PP G G PP
Sbjct: 243 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 281
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 691 PKGXPPXGRPXKKXPPPXXGGGPPXGG 771
P+G PP G PPP GG PP G
Sbjct: 303 PRGSPPTG----SLPPPQAGGSPPPAG 325
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 697 GXPPXGRPXKKXPPPXXGGGPPXGGNXKXTRGXPP 801
G PP R PPP G PP G G P
Sbjct: 287 GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 321
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.22
Identities = 22/71 (30%), Positives = 22/71 (30%)
Frame = -2
Query: 479 PPPXXGGGXXXGKXPPXPPPXXGKKKXXXRGGXXFFSPAXRGXQKAXXPPXSPKXXXFSP 300
PPP G G P PPP G G P G PP P P
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSP---PPPPTG-----SPPPPPAGGSPPP 312
Query: 299 PXXGGGPXPXP 267
P G P P P
Sbjct: 313 PRAGSPPPPPP 323
Score = 33.1 bits (72), Expect = 0.30
Identities = 23/75 (30%), Positives = 23/75 (30%)
Frame = -2
Query: 479 PPPXXGGGXXXGKXPPXPPPXXGKKKXXXRGGXXFFSPAXRGXQKAXXPPXSPKXXXFSP 300
PPP G PPP G R G P RG P P SP
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP--PPQAGGSP 342
Query: 299 PXXGGGPXPXPXXXK 255
P G G P P K
Sbjct: 343 PPAGTGSPPPPPRQK 357
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 682 GXFPKGXPPXGRPXKKXPPPXXGGGPPXGGNXKXTRGXP 798
G P G PP GRP + PP G PP G + R P
Sbjct: 435 GSPPTGSPPTGRPPRGSPPT---GSPPTGLPSRQKRQAP 470
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = +1
Query: 691 PKGXPPXGRPXKKXPPPXXGGGPP--XGGNXKXTRGXPP 801
PKG PP PPP G PP G G PP
Sbjct: 264 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 302
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 691 PKGXPPXGRPXKKXPPPXXGGGPPXGG 771
P+G PP G PPP GG PP G
Sbjct: 324 PRGSPPTG----SLPPPQAGGSPPPAG 346
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 697 GXPPXGRPXKKXPPPXXGGGPPXGGNXKXTRGXPP 801
G PP R PPP G PP G G P
Sbjct: 308 GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 342
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.22
Identities = 22/71 (30%), Positives = 22/71 (30%)
Frame = -2
Query: 479 PPPXXGGGXXXGKXPPXPPPXXGKKKXXXRGGXXFFSPAXRGXQKAXXPPXSPKXXXFSP 300
PPP G G P PPP G G P G PP P P
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSP---PPPPTG-----SPPPPPAGGSPPP 297
Query: 299 PXXGGGPXPXP 267
P G P P P
Sbjct: 298 PRAGSPPPPPP 308
Score = 33.1 bits (72), Expect = 0.30
Identities = 23/75 (30%), Positives = 23/75 (30%)
Frame = -2
Query: 479 PPPXXGGGXXXGKXPPXPPPXXGKKKXXXRGGXXFFSPAXRGXQKAXXPPXSPKXXXFSP 300
PPP G PPP G R G P RG P P SP
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP--PPQAGGSP 327
Query: 299 PXXGGGPXPXPXXXK 255
P G G P P K
Sbjct: 328 PPAGTGSPPPPPRQK 342
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 682 GXFPKGXPPXGRPXKKXPPPXXGGGPPXGGNXKXTRGXP 798
G P G PP GRP + PP G PP G + R P
Sbjct: 420 GSPPTGSPPTGRPPRGSPPT---GSPPTGLPSRQKRQAP 455
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = +1
Query: 691 PKGXPPXGRPXKKXPPPXXGGGPP--XGGNXKXTRGXPP 801
PKG PP PPP G PP G G PP
Sbjct: 249 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 287
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 691 PKGXPPXGRPXKKXPPPXXGGGPPXGG 771
P+G PP G PPP GG PP G
Sbjct: 309 PRGSPPTG----SLPPPQAGGSPPPAG 331
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 697 GXPPXGRPXKKXPPPXXGGGPPXGGNXKXTRGXPP 801
G PP R PPP G PP G G P
Sbjct: 293 GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 327
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +2
Query: 404 FFFPXXGGGXGGFFPXXTPPPXGGGGXXFXGPLXVPXPKXP 526
F P GGG G P PPP G GG PL +P + P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGGPSLP-PLQLPRFELP 56
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 32.3 bits (70), Expect = 0.52
Identities = 20/56 (35%), Positives = 21/56 (37%)
Frame = +1
Query: 346 FWXPLXAGEKXXXPPLXXXFFFPXXGGGXGGXFPXKXPPPXXGGGXXFXGPPXGPP 513
F P +G P F P GG GG P PPP G GPP G P
Sbjct: 378 FAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGP---PPPGGPGAPGSYGPPQGGP 430
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
Frame = -2
Query: 803 PGGXPRVXXXFPPXGGP----PPXXGGGXFFXGLPXGGXPLGKXP 681
PGG PP GGP PP GG + P G P+G P
Sbjct: 414 PGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPP 458
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/65 (29%), Positives = 22/65 (33%)
Frame = -2
Query: 476 PPXXGGGXXXGKXPPXPPPXXGKKKXXXRGGXXFFSPAXRGXQKAXXPPXSPKXXXFSPP 297
P GG G PP P G +GG F P G A PP + +PP
Sbjct: 400 PQGPGGPGGYGPPPPGGPGAPG-SYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPP 458
Query: 296 XXGGG 282
G
Sbjct: 459 PGAAG 463
>U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protein
15, isoform a protein.
Length = 780
Score = 31.9 bits (69), Expect = 0.68
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -2
Query: 797 GXPRVXXXFPPXGGPPPXXGGGXFFXGLPXGGXPLGKXP 681
G P P GGPP GG G P G P+G P
Sbjct: 211 GQPPPQMGAPNMGGPPNGYGGYGMMNGPPGSGAPMGGNP 249
>U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protein
15, isoform b protein.
Length = 777
Score = 31.9 bits (69), Expect = 0.68
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -2
Query: 797 GXPRVXXXFPPXGGPPPXXGGGXFFXGLPXGGXPLGKXP 681
G P P GGPP GG G P G P+G P
Sbjct: 208 GQPPPQMGAPNMGGPPNGYGGYGMMNGPPGSGAPMGGNP 246
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 31.5 bits (68), Expect = 0.90
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +1
Query: 676 FCGXFPKGXP-PXGRPXKKXPPPXXGGGPPXGGNXKXTRGXPPG 804
FC P G P G P K PP GG GG + PPG
Sbjct: 135 FCFDCPAGPPGAVGGPGPKGPPGPPGGPGELGGPGRGGNRGPPG 178
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 31.5 bits (68), Expect = 0.90
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +1
Query: 676 FCGXFPKGXP-PXGRPXKKXPPPXXGGGPPXGGNXKXTRGXPPG 804
FC P G P G P K PP GG GG + PPG
Sbjct: 135 FCFDCPAGPPGAVGGPGPKGPPGPPGGPGELGGPGRGGNRGPPG 178
>U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical
protein F26B1.2c protein.
Length = 380
Score = 31.5 bits (68), Expect = 0.90
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 682 GXFPKGXPPXGRPXKKXPPPXXGGGPPXGG 771
G FP P G P + P P GG P GG
Sbjct: 203 GGFPGNMPAGGPPNNRGPAPQRGGQGPPGG 232
>U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical
protein F26B1.2a protein.
Length = 397
Score = 31.5 bits (68), Expect = 0.90
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 682 GXFPKGXPPXGRPXKKXPPPXXGGGPPXGG 771
G FP P G P + P P GG P GG
Sbjct: 220 GGFPGNMPAGGPPNNRGPAPQRGGQGPPGG 249
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = +2
Query: 404 FFFPXXGGGXGGFFPXXTPPP--XGGGGXXFXGP 499
F FP GGG G P PP GGGG + P
Sbjct: 17 FLFPSGGGGGCGCAPPPPPPACGCGGGGGGYAAP 50
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 404 FFFPXXGGGXGGFFPXXTPPPXGGG 478
F F GGG GG PPP GGG
Sbjct: 16 FLFNLLGGGGGGCCAPPPPPPCGGG 40
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.7 bits (61), Expect(2) = 1.5
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = -2
Query: 770 PPXGG--PPPXXGGGXFFXGLPXGGXPLG 690
PP GG PPP G ++ G P G P G
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPPGQPYG 701
Score = 20.6 bits (41), Expect(2) = 1.5
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -2
Query: 803 PGGXPRVXXXFPPXGG 756
PGG P+ +PP G
Sbjct: 630 PGGPPQQAYRYPPQQG 645
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.7 bits (61), Expect(2) = 1.5
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = -2
Query: 770 PPXGG--PPPXXGGGXFFXGLPXGGXPLG 690
PP GG PPP G ++ G P G P G
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPPGQPYG 701
Score = 20.6 bits (41), Expect(2) = 1.5
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -2
Query: 803 PGGXPRVXXXFPPXGG 756
PGG P+ +PP G
Sbjct: 630 PGGPPQQAYRYPPQQG 645
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +2
Query: 404 FFFPXXGGGXGGFFPXXTPPPXGGGGXXFXGPLXVPXPKXP 526
F P GGG G P PPP G G PL +P + P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGAPALP-PLQLPRFELP 56
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +2
Query: 404 FFFPXXGGGXGGFFPXXTPPPXGGGGXXFXGPLXVPXPKXP 526
F P GGG G P PPP G G PL +P + P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGAPALP-PLQLPRFELP 56
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/71 (25%), Positives = 21/71 (29%)
Frame = -2
Query: 479 PPPXXGGGXXXGKXPPXPPPXXGKKKXXXRGGXXFFSPAXRGXQKAXXPPXSPKXXXFSP 300
PPP G PP PPP + R P + P P +P
Sbjct: 124 PPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNP 183
Query: 299 PXXGGGPXPXP 267
P P P P
Sbjct: 184 PRTPPSPIPPP 194
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 706 PXGRPXKKXPPPXXGGGPPXGGNXKXTRGXPPG 804
P GRP + PP G P G N + PPG
Sbjct: 146 PPGRPGPRGPPGEVGPAGPSGDNGRKGPPGPPG 178
>U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protein
140, isoform b protein.
Length = 210
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 706 PXGRPXKKXPPPXXGGGPPXGGNXKXTRGXPPG 804
P GRP + PP G P G N + PPG
Sbjct: 146 PPGRPGPRGPPGEVGPAGPSGDNGRKGPPGPPG 178
>U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protein
19 protein.
Length = 289
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +1
Query: 706 PXGRPXKKXPPPXXGGGPPXGGNXKXTRGXPPG 804
P GRP K P G P GGN + RG PPG
Sbjct: 145 PPGRPGPKGPSGLPGSAGPAGGNGR--RG-PPG 174
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +1
Query: 421 GGGXGGXFPXKXPPPXXGGGXXFXGPPXGPPXKKXXP 531
GGG GG PP GGG G P GPP P
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGG--GGGPTGPPAPPKPP 649
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = +3
Query: 735 PPXXGGGXXPXREXXXXPGXPPGXPPXAPPXXP--PRG 842
P GGG P R G P PP APP P PRG
Sbjct: 618 PGGPGGGGGPPRGPGGGGGGGPTGPP-APPKPPAKPRG 654
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +1
Query: 421 GGGXGGXFPXKXPPPXXGGGXXFXGPPXGPPXKKXXP 531
GGG GG PP GGG G P GPP P
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGG--GGGPTGPPAPPKPP 649
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = +3
Query: 735 PPXXGGGXXPXREXXXXPGXPPGXPPXAPPXXP--PRG 842
P GGG P R G P PP APP P PRG
Sbjct: 618 PGGPGGGGGPPRGPGGGGGGGPTGPP-APPKPPAKPRG 654
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/38 (31%), Positives = 15/38 (39%)
Frame = +1
Query: 688 FPKGXPPXGRPXKKXPPPXXGGGPPXGGNXKXTRGXPP 801
+P G P G P + PPP G P + G P
Sbjct: 813 YPGGPVPPGPPQNRMPPPPPAQGAPSPSGAAGSNGKQP 850
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +2
Query: 602 GXPPGKTFFXRGXPPGARXPXXGXXFVGXFPRAPPPXXGPXKXXPPPVXGGXXP 763
G PP + P P G PR PP P PPP G P
Sbjct: 132 GPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGAYP 185
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +2
Query: 602 GXPPGKTFFXRGXPPGARXPXXGXXFVGXFPRAPPPXXGPXKXXPPPVXGGXXP 763
G PP + P P G PR PP P PPP G P
Sbjct: 132 GPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGAYP 185
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = +1
Query: 676 FCGXFPKGXP-PXGRPXKKXPP-PXXGGGPPXGGNXKXTRGXPPG 804
FC P G P G P K PP P G G P RG PPG
Sbjct: 140 FCFDCPVGPAGPAGGPGPKGPPGPPGGHGEPGPAGRGGPRG-PPG 183
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 403 FFFPXXGGGXGGXFPXKXPPPXXGGGXXFXGPP 501
F FP GGG G P PPP G G PP
Sbjct: 17 FLFPSGGGGGCGCAP--PPPPACGCGGGAAPPP 47
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +2
Query: 608 PPGKTFFXRGXPPGARXPXXGXXFVGXFPRAPP---PXXGPXKXXPPPVXGGXXPXEG 772
PPG PPG R P G P PP P GP PPP P G
Sbjct: 327 PPGMGGMPPPPPPGMRYP-------GGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSG 377
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +2
Query: 608 PPGKTFFXRGXPPGARXPXXGXXFVGXFPRAPP---PXXGPXKXXPPPVXGGXXPXEG 772
PPG PPG R P G P PP P GP PPP P G
Sbjct: 337 PPGMGGMPPPPPPGMRYP-------GGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSG 387
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 5/42 (11%)
Frame = +1
Query: 403 FFFPXXGGGXGGX-----FPXKXPPPXXGGGXXFXGPPXGPP 513
F FP GGG GG P PPP G PP PP
Sbjct: 18 FLFPMAGGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPP 59
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 421 GGGXGGXFPXKXPPPXXGGGXXFXGPPXG 507
GGG GG PPP GGG G G
Sbjct: 45 GGGCGGGCAPPPPPPACGGGCGGGGGGCG 73
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 421 GGGXGGXFPXKXPPPXXGGGXXFXGPPXG 507
GGG GG PPP GGG G G
Sbjct: 102 GGGCGGGCAPPPPPPACGGGCGGGGGGCG 130
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Frame = +1
Query: 691 PKGXPPXGRPXKKXPPPXXG---GGPPXGGNXKXTRGXPPG 804
P G PP G+P ++ P G PP G RG P G
Sbjct: 130 PGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGG 170
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Frame = +1
Query: 691 PKGXPPXGRPXKKXPPPXXG---GGPPXGGNXKXTRGXPPG 804
P G PP G+P ++ P G PP G RG P G
Sbjct: 410 PGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGG 450
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +2
Query: 422 GGGXGGFFPXXTPPPXGGGG 481
GGG G F P PPP GGGG
Sbjct: 205 GGGSGRFPPP--PPPYGGGG 222
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,866,686
Number of Sequences: 27780
Number of extensions: 320016
Number of successful extensions: 2352
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1819
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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