Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_O14
         (975 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    34   0.20 
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    30   2.4  
07_03_1136 + 24218601-24218734,24218769-24219906                       29   4.2  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   5.6  
03_02_0330 + 7502593-7504956,7505020-7506312,7522011-7522235           29   7.4  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           28   9.8  

>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 33.9 bits (74), Expect = 0.20
 Identities = 19/45 (42%), Positives = 19/45 (42%)
 Frame = +2

Query: 455  PPPRGXGVWFLGPXPXPXP*XPXPXXLGXXGXXPXPPGGXXXXXP 589
            PPPRG G     P P   P  P P   G  G  P PPGG     P
Sbjct: 1187 PPPRGHGGVGGPPTPPGAPAPPMPP--GVPGGPPPPPGGRGLPAP 1229


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 15/37 (40%), Positives = 16/37 (43%)
 Frame = +2

Query: 455 PPPRGXGVWFLGPXPXPXP*XPXPXXLGXXGXXPXPP 565
           PPP+G    FL P P P P  P P         P PP
Sbjct: 42  PPPQGAPPPFLAPPPPPPP-GPPPPHQPQFNFGPGPP 77


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 17/42 (40%), Positives = 18/42 (42%)
 Frame = -1

Query: 579 LXXPPGGXGXXPXXPRXXGXGX*GXGXGXGPKNQTPXPRGGG 454
           L  PPGG G  P      G    G G G GP +  P   GGG
Sbjct: 88  LGLPPGGGGA-PGPLGGGGARPPGGGGGGGPPSLPPGAGGGG 128


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 17/51 (33%), Positives = 17/51 (33%)
 Frame = +2

Query: 455 PPPRGXGVWFLGPXPXPXP*XPXPXXLGXXGXXPXPPGGXXXXXPRFXGXP 607
           PPP   G     P   P P  P P      G  P PP G     P   G P
Sbjct: 346 PPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAPGVP 396


>03_02_0330 + 7502593-7504956,7505020-7506312,7522011-7522235
          Length = 1293

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
 Frame = -3

Query: 601  APEXGXXXXPXPGGXGXXPXXPQXPGXRXLGXGXGXXAQKP--NPXSP 464
            APE      P   G G  P  P+ PG      G G  A +P  +P  P
Sbjct: 1171 APEPNGGPRPPTAGAGPPPACPKVPGAPDPQDGHGATAGRPRLSPSDP 1218


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 22/70 (31%), Positives = 22/70 (31%), Gaps = 8/70 (11%)
 Frame = +2

Query: 425 GXFPGSXHTXPPPRGXGVWFLGPXPXPX--------P*XPXPXXLGXXGXXPXPPGGXXX 580
           G  P   H  PP  G G     P P P         P  P P   G     P PP     
Sbjct: 299 GHHPPPPHPLPPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAP 358

Query: 581 XXPRFXGXPG 610
             PR  G PG
Sbjct: 359 AAPRPPG-PG 367


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,604,620
Number of Sequences: 37544
Number of extensions: 218960
Number of successful extensions: 318
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 306
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2834967080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)