Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_O10
         (878 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0072 - 31469595-31469684,31469762-31469848,31469968-314700...    37   0.024
08_02_1354 - 26337628-26338540,26339638-26339981                       32   0.53 
04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019           30   2.1  
07_03_0571 - 19602755-19603831                                         29   3.7  
05_01_0096 + 654074-654499,654673-655326                               29   3.7  
07_01_0945 - 7973736-7974275,7974446-7974580                           29   4.9  
01_06_0959 - 33362810-33363125,33363309-33363475,33363583-333644...    28   8.6  

>03_06_0072 -
           31469595-31469684,31469762-31469848,31469968-31470036,
           31470117-31470185,31470269-31471306
          Length = 450

 Score = 36.7 bits (81), Expect = 0.024
 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
 Frame = -1

Query: 461 KTTSAPSPFTVKPSTSA-GRDLTFCALRSATISSVRNSTSSLSPFV*SAFNPQ---PQLQ 294
           ++ +  +P    PS+ A G  + F +   +    V  S+ S SP + SAFNP    P LQ
Sbjct: 103 RSCATKAPVNDPPSSLAIGLLMVFTSGMGSATGRVGASSLSASPSISSAFNPAALLPFLQ 162

Query: 293 VLEWL-CSKLVEARVPS 246
             +WL CS L+ +  PS
Sbjct: 163 ATKWLPCSDLITSAAPS 179


>08_02_1354 - 26337628-26338540,26339638-26339981
          Length = 418

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -1

Query: 449 APSPFTVKPSTSAGRDLTFCALRSATISSVRNSTSSLSP 333
           +PSP T  PST+ GRD   C  R   +  + N   +L+P
Sbjct: 168 SPSPATRSPSTTLGRDRYCCLTREDIVRFLINCLGALAP 206


>04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019
          Length = 508

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = +1

Query: 346 LVEFLTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQL 474
           LV F+   ++ E K + ++ L  E+E F  + +G+EV L++ +
Sbjct: 461 LVGFIFTLLLPESKGKSLEDLTGEIEEFQEEDEGSEVALSRPI 503


>07_03_0571 - 19602755-19603831
          Length = 358

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 24/104 (23%), Positives = 44/104 (42%)
 Frame = +1

Query: 226 MSCSRRLDGTLASTSLLHNHSNTCSCGCGLKALHTKGERELVEFLTEEIVAERKAQKVKS 405
           MSCS  L    +S++L     +  SCG   +    +  R  +  L   I + R  QK+  
Sbjct: 1   MSCSH-LSTAWSSSALATRRRSAPSCGSSGRL---QVVRCSLRELRSRIDSVRNTQKITE 56

Query: 406 LPAEVEGFTVKGDGAEVVLTKQLKDETIRVTFNVNHTVDSDDFE 537
               V    V+     VV ++   +  + V +N+N  + ++D +
Sbjct: 57  AMKLVAAAKVRRAQEAVVSSRPFSEALVEVLYNMNQEIQTEDID 100


>05_01_0096 + 654074-654499,654673-655326
          Length = 359

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
 Frame = +1

Query: 310 GLKALHTKGERELVEFLTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQLKDETI 489
           G   LH  G+  L   L   ++A          P  V G  +  D   +VLT   +   +
Sbjct: 100 GQPPLHRAGDSRLRMSLN--VLAVNIVSSDVGYPVLVYGTVIARDDETLVLTGPTRSIEV 157

Query: 490 R--VTFNVNHTVDSDDFEGDVQTEKQEFSE 573
              V F VN  +  ++ +GDV  + +EFS+
Sbjct: 158 SDSVFFEVNLKLKEEEDDGDVVVDDREFSK 187


>07_01_0945 - 7973736-7974275,7974446-7974580
          Length = 224

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -2

Query: 328 CEAPSTRSRSCKYWNGCVASWWKPGSHLTFESSSCAI 218
           C  P   S   + W GC A+W  P + L+  S S A+
Sbjct: 166 CRWPRVASTGARQWQGCHAAWLSPVAPLS-SSLSAAV 201


>01_06_0959 -
           33362810-33363125,33363309-33363475,33363583-33364410,
           33364483-33364719,33365455-33365871,33365951-33366412,
           33367197-33367382
          Length = 870

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 749 LHTLCHSIHPYIGLFRQCRTHRYIHQQKLQ 660
           LH + H  HP +  F   R H Y+H  K +
Sbjct: 167 LHNIGHENHPTVLRFYSLRVHDYVHTIKFR 196


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,672,718
Number of Sequences: 37544
Number of extensions: 448659
Number of successful extensions: 1265
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)