Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_O09
(885 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0009 + 57658-60086,60855-60935,61094-61295,61385-61905,619... 114 1e-25
11_04_0330 - 16446685-16446776,16446968-16447119,16447172-164472... 99 5e-21
06_01_0608 - 4399252-4399894,4401640-4402427 33 0.40
03_06_0495 + 34323082-34323173,34323600-34323742,34324265-343243... 30 2.1
07_03_0629 - 20076676-20080390,20080508-20080576,20081335-20081660 29 5.0
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 29 6.6
12_02_0357 + 17941898-17943691 28 8.7
12_01_0468 + 3661177-3661626 28 8.7
06_01_0591 + 4261483-4261631,4261837-4262007,4262127-4262226,426... 28 8.7
>01_01_0009 + 57658-60086,60855-60935,61094-61295,61385-61905,
61996-62114,62248-62345
Length = 1149
Score = 114 bits (274), Expect = 1e-25
Identities = 58/127 (45%), Positives = 82/127 (64%), Gaps = 2/127 (1%)
Frame = +2
Query: 509 GLIWKKGYDKGDIKGHVYDDVLPALEQWRSVEGQKIYIYSSGSVQAQKLLFGQSSA-GDL 685
G IW++G+D G+++ VYDD AL +WR+ K YIYSSGS +AQ+L+F ++A GDL
Sbjct: 1010 GRIWRRGFDSGELRSEVYDDAADALRRWRA----KAYIYSSGSREAQRLIFANTAAHGDL 1065
Query: 686 LPLIDGHFDTAVGAKQEATSYTAIVEKIGC-KPEEILFLXDIEKXAXAARTXGXXVAXXX 862
+ G FDT +GAK+E +SY I + +G +P +ILFL D+ + A AA+T G V
Sbjct: 1066 RDHLCGFFDTTIGAKREVSSYYEIWQTLGTDRPSQILFLTDVYQEAAAAKTAGLEVIISV 1125
Query: 863 RXXNPPL 883
R N PL
Sbjct: 1126 RPGNAPL 1132
Score = 81.8 bits (193), Expect = 7e-16
Identities = 52/121 (42%), Positives = 71/121 (58%), Gaps = 4/121 (3%)
Frame = +1
Query: 157 MAKENTVIGDIVKKSKVLLLDIEGTTTSISFVKDKLFPYAEENVKDFLDAQW-DEEDVKE 333
MA ++ + D+ +V+L DIEGTTT ISFV D LFPYA +NV+ L A + E+ +
Sbjct: 891 MAMASSELPDLSAIQRVVL-DIEGTTTPISFVADVLFPYARDNVRRHLAATYGSSEETRA 949
Query: 334 AVNALRKLAIEDQEKSVEGLVTIPGEDASKEDQ---IEGLVKNVKWQMSSDRKVAPLKQL 504
V LR ED + V+G V +P DA E + +E L NV+ + +DRKV LKQL
Sbjct: 950 DVALLRAQVEEDLAQGVDGAVAVP-PDAEGEGEGAVVEALAANVESMIRADRKVTALKQL 1008
Query: 505 Q 507
Q
Sbjct: 1009 Q 1009
>11_04_0330 -
16446685-16446776,16446968-16447119,16447172-16447281,
16447518-16447619,16447705-16447854,16448195-16448350,
16448552-16448713,16449549-16449638,16450152-16450271,
16451323-16451418,16451502-16451638,16453400-16453622
Length = 529
Score = 98.7 bits (235), Expect = 5e-21
Identities = 55/137 (40%), Positives = 79/137 (57%), Gaps = 12/137 (8%)
Frame = +2
Query: 509 GLIWKKGYDKGDIKGHVYDDVLPALEQWRSVEGQKIYIYSSGSVQAQKLLFGQSSAGDLL 688
G IW+ G++ +++G V+DDV AL+ W + G K+YIYSSGS +AQ+LLFG ++ GDL
Sbjct: 379 GHIWRTGFESKELQGVVFDDVPEALKHWHA-SGMKVYIYSSGSREAQRLLFGNTAYGDLR 437
Query: 689 PLIDGHFDTAVGA-----------KQEATSYTAIVEKIGC-KPEEILFLXDIEKXAXAAR 832
+ G FDT G K+E SY I + +G P +ILF+ D+ + A AA+
Sbjct: 438 QYLCGFFDTTTGEIMIPSRINRSNKRETRSYFEISQSLGVDSPAQILFITDVFQEAVAAK 497
Query: 833 TXGXXVAXXXRXXNPPL 883
+ G V R N PL
Sbjct: 498 SAGFEVIISIRPGNAPL 514
Score = 97.9 bits (233), Expect = 9e-21
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Frame = +1
Query: 193 KKSK-VLLLDIEGTTTSISFVKDKLFPYAEENVKDFLDAQWDEEDVKEAVNALRKLAIED 369
K SK ++LDIEGTTT ISFV D +FPYA +NV+ L + + ++ KE + LR ED
Sbjct: 273 KSSKHCVVLDIEGTTTPISFVTDVMFPYARDNVRKHLTSTYSSDETKEDIKLLRIQVEED 332
Query: 370 QEKSVEGLVTIPGEDASKEDQIEGLVKNVKWQMSSDRKVAPLKQLQ 507
+ + G V IP +DA KE+ I LV NV+ + +DRK+ LKQLQ
Sbjct: 333 LKNGIVGSVPIPPDDADKEEVINALVANVESMIKADRKITSLKQLQ 378
>06_01_0608 - 4399252-4399894,4401640-4402427
Length = 476
Score = 32.7 bits (71), Expect = 0.40
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +1
Query: 268 PYAEENVKDFLDAQWDEEDVKEAVNA---LRKLAIEDQEKSVEGLVT 399
PY E++++ LD + DEEDV+ + +A L K+ +E + L+T
Sbjct: 371 PYTEDDIRKILDIRCDEEDVEMSADAKVLLTKIGVETSLRYAIHLIT 417
>03_06_0495 +
34323082-34323173,34323600-34323742,34324265-34324315,
34324405-34324626,34324731-34324833,34325156-34325552,
34326564-34326735,34326995-34327089,34327246-34327455
Length = 494
Score = 30.3 bits (65), Expect = 2.1
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Frame = +1
Query: 145 GSVEMAKENT-----VIGDIVKKSKVLLLDIEGTTTSISFVKDKLFPYAEENVKDFLDAQ 309
G +E+A++NT V+ D K VL IEG +T + D L + EE + +D+
Sbjct: 251 GLLELARDNTSGAGNVLPDQDKLKDVLKSRIEGISTMDA---DDLSAHREE--RQLVDSL 305
Query: 310 WDEEDVKEAVNALRKLAIEDQEKSVEGLVTIPGEDASKE 426
W KE N L +EK GLV +PGEDA ++
Sbjct: 306 W-----KECYNEPSSL----REK---GLVVLPGEDAPQQ 332
>07_03_0629 - 20076676-20080390,20080508-20080576,20081335-20081660
Length = 1369
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +1
Query: 178 IGDIVKKSKVLLLDIEGTT---TSISFVKDKLFPYAEE-NVKDFLD-AQWDEEDVKEAVN 342
+G++ + K+ L + T + D +FPY EE + + QW E + K +
Sbjct: 1034 LGELPRLKKLSLFGLSSITHINDQVYGTNDVIFPYLEELHFSELFSWEQWSEAEYKLLIP 1093
Query: 343 ALRKLAI 363
LRKL I
Sbjct: 1094 HLRKLGI 1100
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 28.7 bits (61), Expect = 6.6
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +1
Query: 181 GDIVKKSKVLLLDIEGTTTSISFVKD--KLFPYAEENVKDFLDAQWDEEDVKEAVNALRK 354
G I ++ K L++D +F +D ++F N + L + E VKE K
Sbjct: 238 GFIYRRLKCLIIDEADRLLEQNFEEDMKQIFKRLPLNRQTVLFSATQTEQVKE----FAK 293
Query: 355 LAIEDQEKSVEGLVTIPGEDASKEDQIEGL 444
L+ E E+S V + +DA +EGL
Sbjct: 294 LSFEKNEESTSKPVYVGVDDAETNATVEGL 323
>12_02_0357 + 17941898-17943691
Length = 597
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -1
Query: 189 NIADYSILFCHFDRSTPALPELLLCISKFI*LELTRFSAKKALT*IXNLKGFP 31
N+A Y +++ DR T A P L+C+ + FS AL + +K FP
Sbjct: 102 NLAGYLMVYLALDRRTAAPPVWLMCVYICVGANALTFSNTGAL--VSCVKNFP 152
>12_01_0468 + 3661177-3661626
Length = 149
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/61 (26%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +1
Query: 277 EENVKDFLDAQWDEEDVKEAVNALRKLAIEDQEKSVEGLVTIPGEDASKEDQ-IEGLVKN 453
EE V++ D + +EE V+E + + ++++E+ + V GE+ ++E Q +G+V++
Sbjct: 71 EEEVEEEEDIE-EEEVVEEEEEEIEEEEVKEEEEELREQVQEAGEEVNEEQQGADGVVQS 129
Query: 454 V 456
+
Sbjct: 130 M 130
>06_01_0591 + 4261483-4261631,4261837-4262007,4262127-4262226,
4263151-4263315,4263416-4263544,4263758-4263858,
4264527-4264596,4265080-4265331,4265828-4265897,
4266281-4266341,4266916-4267003,4267746-4267830,
4268168-4268234,4268442-4268559,4268843-4268923,
4269022-4269267,4269670-4269771,4269847-4269914,
4270040-4270171,4270283-4270430,4270504-4270790,
4270920-4271067,4271156-4271331,4271407-4271518,
4271614-4271667,4273134-4273244,4273317-4273478,
4273627-4273814,4273948-4274137,4274297-4274464,
4274832-4274912
Length = 1359
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 668 SSAGDLLPLIDGHFDTAVGAKQEATSYTAIVEKIGCKPEEI 790
S A ++PL++G T ++E S +VE +G EE+
Sbjct: 1066 SYAAPVVPLLNGFLTTFTETEKEMISVERVVEYVGIPQEEL 1106
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,863,712
Number of Sequences: 37544
Number of extensions: 495986
Number of successful extensions: 1251
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1243
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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