Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_O07
         (924 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       35   0.11 
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   5.2  
08_01_0059 - 394001-394708                                             29   6.9  
04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476     28   9.1  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 34.7 bits (76), Expect = 0.11
 Identities = 17/54 (31%), Positives = 17/54 (31%)
 Frame = +1

Query: 634 PPXPXGXPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPPXXXXXXGXXXXXPP 795
           PP P   PP       PPPP           K    PPPP      G     PP
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPP 382



 Score = 29.5 bits (63), Expect = 3.9
 Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 5/49 (10%)
 Frame = +1

Query: 622 KKXXPPXPXGXPPXXXXXXXPPPP-----XXXXKKXXGGGKXXFXPPPP 753
           K   PP P   PP       PPPP              GGK    PPPP
Sbjct: 333 KAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPP 381


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 15/40 (37%), Positives = 15/40 (37%)
 Frame = +1

Query: 634 PPXPXGXPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPP 753
           PP P   PP       PPPP         G K    PPPP
Sbjct: 635 PPPPPPPPPSLPNRLVPPPPAPGI-----GNKFPAPPPPP 669



 Score = 28.3 bits (60), Expect = 9.1
 Identities = 13/40 (32%), Positives = 13/40 (32%)
 Frame = +1

Query: 634 PPXPXGXPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPP 753
           PP P G  P       PPPP                PPPP
Sbjct: 551 PPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPP 590


>08_01_0059 - 394001-394708
          Length = 235

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 13/40 (32%), Positives = 13/40 (32%)
 Frame = +1

Query: 634 PPXPXGXPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPP 753
           PP P   PP       PPPP                PPPP
Sbjct: 18  PPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAPPPP 57


>04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476
          Length = 676

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 16/40 (40%), Positives = 17/40 (42%)
 Frame = +1

Query: 634 PPXPXGXPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPP 753
           PP P G PP       PPPP        GG    + PPPP
Sbjct: 489 PPPPRGNPP--SWVPLPPPP--------GGNAPSWVPPPP 518


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,163,668
Number of Sequences: 37544
Number of extensions: 315434
Number of successful extensions: 820
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)