Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_O07
(924 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.29
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.29
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.29
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.5
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.7
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 6.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.2
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +1
Query: 634 PPXPXGXPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPPXXXXXXGXXXXXPP 795
PP P G PP PPPP GG PPPP G PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPP--------GGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +1
Query: 634 PPXPXGXPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPPXXXXXXGXXXXXPP 795
PP P G PP PPPP GG PPPP PP
Sbjct: 713 PPPPPGLPP-ITGGPPPPPPPGGLPPITGGPP---PPPPPGGLPPISGGPPPPP 762
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 634 PPXPXGXPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPP 753
PP P G P PPPP GG PPPP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP--PPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +1
Query: 634 PPXPXGXPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPPXXXXXXGXXXXXPP 795
PP P G PP PPPP GG PPPP G PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPP--------GGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +1
Query: 634 PPXPXGXPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPPXXXXXXGXXXXXPP 795
PP P G PP PPPP GG PPPP PP
Sbjct: 713 PPPPPGLPP-ITGGPPPPPPPGGLPPITGGPP---PPPPPGGLPPISGGPPPPP 762
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 634 PPXPXGXPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPP 753
PP P G P PPPP GG PPPP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP--PPPPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +1
Query: 634 PPXPXGXPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPPXXXXXXGXXXXXPP 795
PP P G PP PPPP GG PPPP G PP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPP--------GGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +1
Query: 634 PPXPXGXPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPPXXXXXXGXXXXXPP 795
PP P G PP PPPP GG PPPP PP
Sbjct: 296 PPPPPGLPP-ITGGPPPPPPPGGLPPITGGPP---PPPPPGGLPPISGGPPPPP 345
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 634 PPXPXGXPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPP 753
PP P G P PPPP GG PPPP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP--PPPPP 348
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = +1
Query: 634 PPXPXG---XPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPPXXXXXXGXXXXXPP 795
PP P G PP PPPP GG PPPP G PP
Sbjct: 300 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG----MPPPPPPGMRYPGGMPPPPP 352
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/51 (27%), Positives = 15/51 (29%)
Frame = +1
Query: 643 PXGXPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPPXXXXXXGXXXXXPP 795
P PP PPPP + G PPPP PP
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP 335
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = +1
Query: 634 PPXPXG---XPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPPXXXXXXGXXXXXPP 795
PP P G PP PPPP GG PPPP G PP
Sbjct: 310 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG----MPPPPPPGMRYPGGMPPPPP 362
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/51 (27%), Positives = 15/51 (29%)
Frame = +1
Query: 643 PXGXPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPPXXXXXXGXXXXXPP 795
P PP PPPP + G PPPP PP
Sbjct: 295 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP 345
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +1
Query: 634 PPXPXGXPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPPXXXXXXGXXXXXPP 795
PP P G PP PPPP G PPPP PP
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS---PPPPPTGSPPPPPAGGSPP 290
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 634 PPXPXGXPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPP 750
PP G PP PPPP G PPP
Sbjct: 265 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +1
Query: 634 PPXPXGXPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPPXXXXXXGXXXXXPP 795
PP P G PP PPPP G PPPP PP
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS---PPPPPTGSPPPPPAGGSPP 311
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 634 PPXPXGXPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPP 750
PP G PP PPPP G PPP
Sbjct: 286 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +1
Query: 634 PPXPXGXPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPPXXXXXXGXXXXXPP 795
PP P G PP PPPP G PPPP PP
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS---PPPPPTGSPPPPPAGGSPP 296
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 634 PPXPXGXPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPP 750
PP G PP PPPP G PPP
Sbjct: 271 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 309
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +1
Query: 634 PPXPXGXPPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPPXXXXXXGXXXXXPP 795
PP P G PP PPPP G PPPP PP
Sbjct: 726 PPPPQGIPPMGFDPNKPPPPMFQQGFNAGA------PPPPFGRGAGPMSSFPPP 773
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 655 PPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPP 753
PP PPPP + G G PPPP
Sbjct: 35 PPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPP 67
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 655 PPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPP 753
PP PPPP + G G PPPP
Sbjct: 98 PPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPP 130
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 655 PPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPP 753
PP PPPP + G G PPPP
Sbjct: 129 PPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPP 161
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 655 PPXXXXXXXPPPPXXXXKKXXGGGKXXFXPPPP 753
PP PPPP + G G PPPP
Sbjct: 253 PPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPP 285
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Frame = +1
Query: 634 PPXPXGXPPXXXXXXXPPPPX--XXXKKXXGGGKXXFXPPPP 753
PP P PP PPPP K G PPPP
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPP 1381
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,071,002
Number of Sequences: 27780
Number of extensions: 210727
Number of successful extensions: 615
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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