Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_O02
(862 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48615-1|CAA88531.1| 953|Homo sapiens serine/threonine kinase w... 37 0.11
X90846-1|CAA62351.1| 954|Homo sapiens mixed lineage kinase 2 pr... 37 0.11
AL359392-1|CAI40208.2| 1055|Homo sapiens LIM domain 7 protein. 31 5.4
AL137782-2|CAI40006.2| 1055|Homo sapiens LIM domain 7 protein. 31 5.4
AL137121-1|CAI39479.2| 1055|Homo sapiens LIM domain 7 protein. 31 5.4
AF174600-1|AAF04521.1| 255|Homo sapiens F-box protein Fbx20 pro... 31 5.4
Z98051-2|CAI42861.1| 878|Homo sapiens PHD finger protein 8 prot... 31 7.1
Z98051-1|CAI42860.1| 1060|Homo sapiens PHD finger protein 8 prot... 31 7.1
BC053861-1|AAH53861.1| 1024|Homo sapiens PHD finger protein 8 pr... 31 7.1
AL732374-7|CAI41582.1| 952|Homo sapiens PHD finger protein 8 pr... 31 7.1
AL732374-6|CAI41581.1| 658|Homo sapiens PHD finger protein 8 pr... 31 7.1
AL732374-2|CAI41577.1| 878|Homo sapiens PHD finger protein 8 pr... 31 7.1
AL732374-1|CAI41576.1| 1060|Homo sapiens PHD finger protein 8 pr... 31 7.1
AL589872-1|CAH70724.1| 1060|Homo sapiens PHD finger protein 8 pr... 31 7.1
AK021696-1|BAB13877.1| 790|Homo sapiens protein ( Homo sapiens ... 31 7.1
AB029034-1|BAA83063.1| 1084|Homo sapiens KIAA1111 protein protein. 31 7.1
>Z48615-1|CAA88531.1| 953|Homo sapiens serine/threonine kinase with
SH3 domain, leucine zipper domain and proline rich
protein.
Length = 953
Score = 36.7 bits (81), Expect = 0.11
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = -3
Query: 719 SATLPEXEKGGXVSRKR--QGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQG 546
S+TL + GG K +GS+Q S+ G++P + GFA+ + +F +A G
Sbjct: 561 SSTLQKERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDG 620
Query: 545 GGAYGKTPATRPFYGSWP 492
G + +P + P Y S P
Sbjct: 621 GSSVPPSPYSTPSYLSVP 638
>X90846-1|CAA62351.1| 954|Homo sapiens mixed lineage kinase 2
protein.
Length = 954
Score = 36.7 bits (81), Expect = 0.11
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = -3
Query: 719 SATLPEXEKGGXVSRKR--QGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQG 546
S+TL + GG K +GS+Q S+ G++P + GFA+ + +F +A G
Sbjct: 562 SSTLQKERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDG 621
Query: 545 GGAYGKTPATRPFYGSWP 492
G + +P + P Y S P
Sbjct: 622 GSSVPPSPYSTPSYLSVP 639
>AL359392-1|CAI40208.2| 1055|Homo sapiens LIM domain 7 protein.
Length = 1055
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 595 PDRTIKIPGVSPWKLPRALSCSDPCRLRDTCP 690
PDR +P PW LP + C L TCP
Sbjct: 210 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCP 241
>AL137782-2|CAI40006.2| 1055|Homo sapiens LIM domain 7 protein.
Length = 1055
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 595 PDRTIKIPGVSPWKLPRALSCSDPCRLRDTCP 690
PDR +P PW LP + C L TCP
Sbjct: 210 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCP 241
>AL137121-1|CAI39479.2| 1055|Homo sapiens LIM domain 7 protein.
Length = 1055
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 595 PDRTIKIPGVSPWKLPRALSCSDPCRLRDTCP 690
PDR +P PW LP + C L TCP
Sbjct: 210 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCP 241
>AF174600-1|AAF04521.1| 255|Homo sapiens F-box protein Fbx20
protein.
Length = 255
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 595 PDRTIKIPGVSPWKLPRALSCSDPCRLRDTCP 690
PDR +P PW LP + C L TCP
Sbjct: 84 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCP 115
>Z98051-2|CAI42861.1| 878|Homo sapiens PHD finger protein 8
protein.
Length = 878
Score = 30.7 bits (66), Expect = 7.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 574 LKSEVAKPDRTIKIPGVSPWKLPRALSCSDPCRLRD 681
+ + K T+ I P KLPRA CSDP R+R+
Sbjct: 621 IDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVRE 656
>Z98051-1|CAI42860.1| 1060|Homo sapiens PHD finger protein 8
protein.
Length = 1060
Score = 30.7 bits (66), Expect = 7.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 574 LKSEVAKPDRTIKIPGVSPWKLPRALSCSDPCRLRD 681
+ + K T+ I P KLPRA CSDP R+R+
Sbjct: 657 IDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVRE 692
>BC053861-1|AAH53861.1| 1024|Homo sapiens PHD finger protein 8
protein.
Length = 1024
Score = 30.7 bits (66), Expect = 7.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 574 LKSEVAKPDRTIKIPGVSPWKLPRALSCSDPCRLRD 681
+ + K T+ I P KLPRA CSDP R+R+
Sbjct: 621 IDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVRE 656
>AL732374-7|CAI41582.1| 952|Homo sapiens PHD finger protein 8
protein.
Length = 952
Score = 30.7 bits (66), Expect = 7.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 574 LKSEVAKPDRTIKIPGVSPWKLPRALSCSDPCRLRD 681
+ + K T+ I P KLPRA CSDP R+R+
Sbjct: 524 IDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVRE 559
>AL732374-6|CAI41581.1| 658|Homo sapiens PHD finger protein 8
protein.
Length = 658
Score = 30.7 bits (66), Expect = 7.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 574 LKSEVAKPDRTIKIPGVSPWKLPRALSCSDPCRLRD 681
+ + K T+ I P KLPRA CSDP R+R+
Sbjct: 384 IDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVRE 419
>AL732374-2|CAI41577.1| 878|Homo sapiens PHD finger protein 8
protein.
Length = 878
Score = 30.7 bits (66), Expect = 7.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 574 LKSEVAKPDRTIKIPGVSPWKLPRALSCSDPCRLRD 681
+ + K T+ I P KLPRA CSDP R+R+
Sbjct: 621 IDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVRE 656
>AL732374-1|CAI41576.1| 1060|Homo sapiens PHD finger protein 8
protein.
Length = 1060
Score = 30.7 bits (66), Expect = 7.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 574 LKSEVAKPDRTIKIPGVSPWKLPRALSCSDPCRLRD 681
+ + K T+ I P KLPRA CSDP R+R+
Sbjct: 657 IDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVRE 692
>AL589872-1|CAH70724.1| 1060|Homo sapiens PHD finger protein 8
protein.
Length = 1060
Score = 30.7 bits (66), Expect = 7.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 574 LKSEVAKPDRTIKIPGVSPWKLPRALSCSDPCRLRD 681
+ + K T+ I P KLPRA CSDP R+R+
Sbjct: 657 IDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVRE 692
>AK021696-1|BAB13877.1| 790|Homo sapiens protein ( Homo sapiens
cDNA FLJ11634 fis, clone HEMBA1004275, moderately
similar to Homo sapiens PHD-finger protein (GRC5) mRNA.
).
Length = 790
Score = 30.7 bits (66), Expect = 7.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 574 LKSEVAKPDRTIKIPGVSPWKLPRALSCSDPCRLRD 681
+ + K T+ I P KLPRA CSDP R+R+
Sbjct: 520 IDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVRE 555
>AB029034-1|BAA83063.1| 1084|Homo sapiens KIAA1111 protein protein.
Length = 1084
Score = 30.7 bits (66), Expect = 7.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 574 LKSEVAKPDRTIKIPGVSPWKLPRALSCSDPCRLRD 681
+ + K T+ I P KLPRA CSDP R+R+
Sbjct: 681 IDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVRE 716
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,275,614
Number of Sequences: 237096
Number of extensions: 2566449
Number of successful extensions: 7423
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7423
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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