Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_N22
         (873 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0042 + 317586-317640,318128-318185,318799-319236,320426-32...    31   1.2  
11_06_0345 + 22544825-22544921,22545751-22545773,22546604-225466...    29   3.7  

>01_01_0042 +
           317586-317640,318128-318185,318799-319236,320426-320467,
           320468-320648,320838-320867
          Length = 267

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 26/68 (38%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
 Frame = -3

Query: 301 AAAAVAWRCESRR------DAVMPVKTSAW--QYFYAESYRLRQICYAVSGFVVLTKTLF 146
           AAAA  WR ++ R      D   P  T  W      A  Y LR   Y V GF ++T  L 
Sbjct: 76  AAAAAKWRTDASRAFQYYLDRSTPHATGRWIGTLAVAAIYALR--VYLVQGFYIVTYGLG 133

Query: 145 *YTLNLFI 122
            Y LNL I
Sbjct: 134 IYLLNLLI 141


>11_06_0345 +
           22544825-22544921,22545751-22545773,22546604-22546690,
           22546809-22546885,22547357-22547510
          Length = 145

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +2

Query: 518 QMKQLAKDPN-MDFSKRTVVYVGGYMDSPSYPVASLLAPQYRRQGYNVLLLDTNKFTGH 691
           Q+K++A+DP+     K   V +GG  D+ +  + + LA ++  + ++ +L +     GH
Sbjct: 22  QVKRIAEDPDDRSLDKSAKVVIGGGQDAMNVTMTNCLAGKFEPKFFHKILQEEIGVKGH 80


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,274,325
Number of Sequences: 37544
Number of extensions: 484289
Number of successful extensions: 1219
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1218
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)