Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_N15
(879 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 171 4e-43
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 171 7e-43
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 169 2e-42
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 169 2e-42
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 169 2e-42
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 168 4e-42
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 123 2e-28
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 123 2e-28
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 87 1e-17
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 87 2e-17
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 86 4e-17
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 85 6e-17
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 85 6e-17
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 85 8e-17
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 85 8e-17
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 85 8e-17
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 84 1e-16
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 83 2e-16
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 83 2e-16
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 83 3e-16
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 83 3e-16
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 83 3e-16
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 76 3e-14
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 73 2e-13
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 73 2e-13
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 60 2e-09
Z99171-1|CAB16308.1| 286|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z82071-5|CAB04919.2| 514|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z82071-3|CAH04734.1| 336|Caenorhabditis elegans Hypothetical pr... 30 1.9
AY204181-1|AAO39185.1| 336|Caenorhabditis elegans nuclear recep... 30 1.9
AY204180-1|AAO39184.1| 514|Caenorhabditis elegans nuclear recep... 30 1.9
AL110478-13|CAC14397.1| 514|Caenorhabditis elegans Hypothetical... 30 1.9
U00052-3|AAK21426.1| 308|Caenorhabditis elegans Hypothetical pr... 29 5.8
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 171 bits (417), Expect = 4e-43
Identities = 75/88 (85%), Positives = 82/88 (93%)
Frame = +3
Query: 432 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 611
MREIVHVQAGQCGNQIG+KFWE+ISDEHG+ G YKGESDLQL+RINVYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 612 PRAVLVDLEPGTMDAVRSGPYGMLFRPD 695
PRAVLVDLEPGTMD+VRSGP+G LFRPD
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPD 88
Score = 64.5 bits (150), Expect = 1e-10
Identities = 31/45 (68%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +1
Query: 739 GHYTEGAELVDSVLDVIRKEAESCDCLXGSS*PXA-GRXPGSGMG 870
GHYTEGAELVD+VLDV+RKEAE CDCL G + G GSGMG
Sbjct: 104 GHYTEGAELVDNVLDVVRKEAEGCDCLQGFQLTHSLGGGTGSGMG 148
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2
Query: 689 PRYFVFGQSGAGNNXXK 739
P FVFGQSGAGNN K
Sbjct: 87 PDNFVFGQSGAGNNWAK 103
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 171 bits (415), Expect = 7e-43
Identities = 73/88 (82%), Positives = 82/88 (93%)
Frame = +3
Query: 432 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 611
MREIVH+QAGQCGNQIG+KFWE+ISDEHG+D TG Y G+SDLQL+RINVYYNEAS GKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 612 PRAVLVDLEPGTMDAVRSGPYGMLFRPD 695
PRA LVDLEPGTMD+VR+GP+G LFRPD
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPD 88
Score = 66.1 bits (154), Expect = 3e-11
Identities = 32/45 (71%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +1
Query: 739 GHYTEGAELVDSVLDVIRKEAESCDCLXGSS*PXA-GRXPGSGMG 870
GHYTEGAELVD+VLDV+RKEAESCDCL G + G GSGMG
Sbjct: 104 GHYTEGAELVDNVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGMG 148
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2
Query: 689 PRYFVFGQSGAGNNXXK 739
P FVFGQSGAGNN K
Sbjct: 87 PDNFVFGQSGAGNNWAK 103
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 169 bits (412), Expect = 2e-42
Identities = 74/88 (84%), Positives = 83/88 (94%)
Frame = +3
Query: 432 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 611
MREIVHVQAGQCGNQIGSKFWE+ISDEHG+ G +KGESDLQL+RI+VYYNEA++GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 612 PRAVLVDLEPGTMDAVRSGPYGMLFRPD 695
PRAVLVDLEPGTMD+VRSGP+G LFRPD
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPD 88
Score = 64.9 bits (151), Expect = 7e-11
Identities = 32/45 (71%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +1
Query: 739 GHYTEGAELVDSVLDVIRKEAESCDCLXGSS*PXA-GRXPGSGMG 870
GHYTEGAELVD+VLDVIRKEAE CDCL G + G GSGMG
Sbjct: 104 GHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMG 148
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2
Query: 689 PRYFVFGQSGAGNNXXK 739
P FVFGQSGAGNN K
Sbjct: 87 PDNFVFGQSGAGNNWAK 103
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 169 bits (412), Expect = 2e-42
Identities = 74/88 (84%), Positives = 82/88 (93%)
Frame = +3
Query: 432 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 611
MREIVH+QAGQCGNQIGSKFWE+ISDEHG+D +G Y G+SDLQL+RINVYYNEA S KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 612 PRAVLVDLEPGTMDAVRSGPYGMLFRPD 695
PRAVLVDLEPGTMD+VRSGP+G LFRPD
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPD 88
Score = 62.1 bits (144), Expect = 5e-10
Identities = 31/45 (68%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +1
Query: 739 GHYTEGAELVDSVLDVIRKEAESCDCLXGSS*PXA-GRXPGSGMG 870
GHYTEGAELVD+VLDV+RKEAES DCL G + G GSGMG
Sbjct: 104 GHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMG 148
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 689 PRYFVFGQSGAGNNXXK 739
P +VFGQSGAGNN K
Sbjct: 87 PDNYVFGQSGAGNNWAK 103
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 169 bits (412), Expect = 2e-42
Identities = 74/88 (84%), Positives = 82/88 (93%)
Frame = +3
Query: 432 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 611
MREIVH+QAGQCGNQIGSKFWE+ISDEHG+D +G Y G+SDLQL+RINVYYNEA S KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 612 PRAVLVDLEPGTMDAVRSGPYGMLFRPD 695
PRAVLVDLEPGTMD+VRSGP+G LFRPD
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPD 88
Score = 62.1 bits (144), Expect = 5e-10
Identities = 31/45 (68%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +1
Query: 739 GHYTEGAELVDSVLDVIRKEAESCDCLXGSS*PXA-GRXPGSGMG 870
GHYTEGAELVD+VLDV+RKEAES DCL G + G GSGMG
Sbjct: 104 GHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMG 148
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 689 PRYFVFGQSGAGNNXXK 739
P +VFGQSGAGNN K
Sbjct: 87 PDNYVFGQSGAGNNWAK 103
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 168 bits (409), Expect = 4e-42
Identities = 73/88 (82%), Positives = 83/88 (94%)
Frame = +3
Query: 432 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 611
MREIVHVQAGQCGNQIGSKFWE+ISDEHG+ G +KGE+DLQL+RI+VYYNEA++GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 612 PRAVLVDLEPGTMDAVRSGPYGMLFRPD 695
PRAVLVDLEPGTMD+VRSGP+G LFRPD
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPD 88
Score = 64.9 bits (151), Expect = 7e-11
Identities = 32/45 (71%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +1
Query: 739 GHYTEGAELVDSVLDVIRKEAESCDCLXGSS*PXA-GRXPGSGMG 870
GHYTEGAELVD+VLDVIRKEAE CDCL G + G GSGMG
Sbjct: 104 GHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMG 148
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2
Query: 689 PRYFVFGQSGAGNNXXK 739
P FVFGQSGAGNN K
Sbjct: 87 PDNFVFGQSGAGNNWAK 103
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 123 bits (296), Expect = 2e-28
Identities = 54/92 (58%), Positives = 69/92 (75%)
Frame = +3
Query: 432 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 611
M+EI++VQ GQCGNQIG+KFWE IS+EHG+ T G YKG++ QL+RI YY E KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 612 PRAVLVDLEPGTMDAVRSGPYGMLFRPDTLSS 707
PRA+LVDL+P +++ VRS YG LF P+ S
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVS 92
Score = 44.8 bits (101), Expect = 8e-05
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +1
Query: 739 GHYTEGAELVDSVLDVIRKEAESCDCLXGSS*PXA-GRXPGSGMG 870
G+Y +GAE+VD VL VIR+EAE+ D L G + G GSG+G
Sbjct: 104 GYYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLG 148
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 123 bits (296), Expect = 2e-28
Identities = 54/92 (58%), Positives = 69/92 (75%)
Frame = +3
Query: 432 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 611
M+EI++VQ GQCGNQIG+KFWE IS+EHG+ T G YKG++ QL+RI YY E KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 612 PRAVLVDLEPGTMDAVRSGPYGMLFRPDTLSS 707
PRA+LVDL+P +++ VRS YG LF P+ S
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVS 92
Score = 44.8 bits (101), Expect = 8e-05
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +1
Query: 739 GHYTEGAELVDSVLDVIRKEAESCDCLXGSS*PXA-GRXPGSGMG 870
G+Y +GAE+VD VL VIR+EAE+ D L G + G GSG+G
Sbjct: 104 GYYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLG 148
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 87.4 bits (207), Expect = 1e-17
Identities = 39/90 (43%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Frame = +3
Query: 435 REIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGES-DLQLDRINVYYNEASSGKYV 611
RE V + GQ G QIG+ WE+ EHG+D G K E + + + +++E+ +GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 612 PRAVLVDLEPGTMDAVRSGPYGMLFRPDTL 701
PRA+ VDLEP +D +R+G YG LF PD +
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQI 95
Score = 41.9 bits (94), Expect = 6e-04
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +1
Query: 739 GHYTEGAELVDSVLDVIRKEAESCDCLXG 825
GHYT G EL+D VLD IRK+ E+C+ L G
Sbjct: 109 GHYTIGKELIDVVLDRIRKQTENCEGLQG 137
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 87.0 bits (206), Expect = 2e-17
Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Frame = +3
Query: 432 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLD--RINVYYNEASSGK 605
MREIV + GQ G QIG+ WE+ EHG+ G+ ++ ++ N +++E SGK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 606 YVPRAVLVDLEPGTMDAVRSGPYGMLFRPDTLSS 707
+VPRA+ VDLEP +D VR+G Y LF P+ L S
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLIS 94
Score = 36.7 bits (81), Expect = 0.022
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 739 GHYTEGAELVDSVLDVIRKEAESCDCLXG 825
GHYT G EL+D V+D +R+ E C L G
Sbjct: 106 GHYTIGKELIDVVMDRVRRLTERCQSLQG 134
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 85.8 bits (203), Expect = 4e-17
Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Frame = +3
Query: 435 REIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLD--RINVYYNEASSGKY 608
RE++ + GQ G Q+G+ WE+ EHG+ G+ E L +D N +++E +GK+
Sbjct: 7 REVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKH 66
Query: 609 VPRAVLVDLEPGTMDAVRSGPYGMLFRPDTL 701
VPRA++VDLEP +D +R+G Y LF P+ L
Sbjct: 67 VPRAIMVDLEPTPIDEIRTGTYKTLFHPEQL 97
Score = 35.1 bits (77), Expect = 0.067
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 739 GHYTEGAELVDSVLDVIRKEAESCDCLXG 825
GHYT G E++D V+D +R+ E+C L G
Sbjct: 111 GHYTIGKEIIDVVMDRVRRLVENCRGLQG 139
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 85.0 bits (201), Expect = 6e-17
Identities = 34/90 (37%), Positives = 55/90 (61%)
Frame = +3
Query: 432 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 611
MRE++ + GQ G QIG+ WE+ EHG+ G +S + + ++++ SG+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 612 PRAVLVDLEPGTMDAVRSGPYGMLFRPDTL 701
PR++ VDLEP +D +R+G Y LF P+ +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQM 90
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 739 GHYTEGAELVDSVLDVIRKEAESCDCLXG 825
GHYT G EL+D+VLD IR+ A++C L G
Sbjct: 104 GHYTVGKELIDTVLDRIRRLADNCSGLQG 132
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 85.0 bits (201), Expect = 6e-17
Identities = 34/90 (37%), Positives = 55/90 (61%)
Frame = +3
Query: 432 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 611
MRE++ + GQ G QIG+ WE+ EHG+ G +S + + ++++ SG+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 612 PRAVLVDLEPGTMDAVRSGPYGMLFRPDTL 701
PR++ VDLEP +D +R+G Y LF P+ +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQM 90
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 739 GHYTEGAELVDSVLDVIRKEAESCDCLXG 825
GHYT G EL+D+VLD IR+ A++C L G
Sbjct: 104 GHYTVGKELIDTVLDRIRRLADNCSGLQG 132
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 84.6 bits (200), Expect = 8e-17
Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Frame = +3
Query: 432 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDL--QLDRINVYYNEASSGK 605
MRE++ + GQ G QIG+ WE+ EHG+ G + L D + +++E SG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 606 YVPRAVLVDLEPGTMDAVRSGPYGMLFRPDTL 701
+VPRAV+VDLEP +D +R+G Y LF P+ L
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQL 92
Score = 35.5 bits (78), Expect = 0.050
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 739 GHYTEGAELVDSVLDVIRKEAESCDCLXG 825
GHYT G E++D LD IR+ A++C L G
Sbjct: 106 GHYTIGKEIIDLTLDRIRRLADNCTGLQG 134
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 84.6 bits (200), Expect = 8e-17
Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Frame = +3
Query: 432 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDL--QLDRINVYYNEASSGK 605
MRE++ + GQ G QIG+ WE+ EHG+ G + L D + +++E SG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 606 YVPRAVLVDLEPGTMDAVRSGPYGMLFRPDTL 701
+VPRAV+VDLEP +D +R+G Y LF P+ L
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQL 92
Score = 35.5 bits (78), Expect = 0.050
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 739 GHYTEGAELVDSVLDVIRKEAESCDCLXG 825
GHYT G E++D LD IR+ A++C L G
Sbjct: 106 GHYTIGKEIIDLTLDRIRRLADNCTGLQG 134
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 84.6 bits (200), Expect = 8e-17
Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Frame = +3
Query: 432 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDL--QLDRINVYYNEASSGK 605
MRE++ + GQ G QIG+ WE+ EHG+ G + L D + +++E SG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 606 YVPRAVLVDLEPGTMDAVRSGPYGMLFRPDTL 701
+VPRAV+VDLEP +D +R+G Y LF P+ L
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQL 92
Score = 35.5 bits (78), Expect = 0.050
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 739 GHYTEGAELVDSVLDVIRKEAESCDCLXG 825
GHYT G E++D LD IR+ A++C L G
Sbjct: 106 GHYTIGKEIIDLTLDRIRRLADNCTGLQG 134
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 83.8 bits (198), Expect = 1e-16
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Frame = +3
Query: 435 REIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGES--DLQLDRINVYYNEASSGKY 608
RE++ + GQ G QIG+ WE+ EHG+ G + + D + + IN ++ E + GK+
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 609 VPRAVLVDLEPGTMDAVRSGPYGMLFRPDTLSS 707
VPR + VDLEP +D VR+G Y LF P+ L S
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLS 100
Score = 33.5 bits (73), Expect = 0.20
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 739 GHYTEGAELVDSVLDVIRKEAESCDCLXG 825
G YT G E++D V+D +++ AE+C+ L G
Sbjct: 112 GRYTIGREMIDVVMDRVKRLAENCNGLQG 140
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 83.4 bits (197), Expect = 2e-16
Identities = 32/90 (35%), Positives = 53/90 (58%)
Frame = +3
Query: 432 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 611
MRE++ + GQ G QIG+ WE+ EHG+ G + + ++++ +G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 612 PRAVLVDLEPGTMDAVRSGPYGMLFRPDTL 701
PR++ VDLEP +D +R+G Y LF P+ +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQM 90
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 739 GHYTEGAELVDSVLDVIRKEAESCDCLXG 825
GHYT G EL+D+VLD IR+ A++C L G
Sbjct: 104 GHYTVGKELIDTVLDRIRRLADNCSGLQG 132
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 83.4 bits (197), Expect = 2e-16
Identities = 32/90 (35%), Positives = 53/90 (58%)
Frame = +3
Query: 432 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 611
MRE++ + GQ G QIG+ WE+ EHG+ G + + ++++ +G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 612 PRAVLVDLEPGTMDAVRSGPYGMLFRPDTL 701
PR++ VDLEP +D +R+G Y LF P+ +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQM 90
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 739 GHYTEGAELVDSVLDVIRKEAESCDCLXG 825
GHYT G EL+D+VLD IR+ A++C L G
Sbjct: 104 GHYTVGKELIDTVLDRIRRLADNCSGLQG 132
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 83.0 bits (196), Expect = 3e-16
Identities = 33/90 (36%), Positives = 53/90 (58%)
Frame = +3
Query: 432 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 611
MRE++ + GQ G QIG+ WE+ EHG+ G E + ++++ +G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 612 PRAVLVDLEPGTMDAVRSGPYGMLFRPDTL 701
PR++ VDLEP +D +R+G Y LF P+ +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQM 90
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 739 GHYTEGAELVDSVLDVIRKEAESCDCLXG 825
GHYT G EL+D+ LD IR+ A++C L G
Sbjct: 104 GHYTVGKELIDTTLDRIRRLADNCSGLQG 132
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 83.0 bits (196), Expect = 3e-16
Identities = 33/90 (36%), Positives = 53/90 (58%)
Frame = +3
Query: 432 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 611
MRE++ + GQ G QIG+ WE+ EHG+ G E + ++++ +G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 612 PRAVLVDLEPGTMDAVRSGPYGMLFRPDTL 701
PR++ VDLEP +D +R+G Y LF P+ +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQM 90
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 739 GHYTEGAELVDSVLDVIRKEAESCDCLXG 825
GHYT G EL+D+ LD IR+ A++C L G
Sbjct: 104 GHYTVGKELIDTTLDRIRRLADNCSGLQG 132
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 82.6 bits (195), Expect = 3e-16
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Frame = +3
Query: 435 REIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDL--QLDRINVYYNEASSGKY 608
RE++ + GQ G QIG+ WE+ EHG+ G + L D + +++E SG++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 609 VPRAVLVDLEPGTMDAVRSGPYGMLFRPDTL 701
VPRAV+VDLEP +D +R+G Y LF P+ L
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQL 91
Score = 35.5 bits (78), Expect = 0.050
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 739 GHYTEGAELVDSVLDVIRKEAESCDCLXG 825
GHYT G E++D LD IR+ A++C L G
Sbjct: 105 GHYTIGKEIIDLTLDRIRRLADNCTGLQG 133
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 76.2 bits (179), Expect = 3e-14
Identities = 33/90 (36%), Positives = 53/90 (58%)
Frame = +3
Query: 432 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 611
MRE++ + GQ G QIG+ WE+ EHG+ G E D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHV 59
Query: 612 PRAVLVDLEPGTMDAVRSGPYGMLFRPDTL 701
PR++ VDLEP +D +R+G Y LF P+ +
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQM 89
Score = 37.5 bits (83), Expect = 0.013
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1
Query: 739 GHYTEGAELVDSVLDVIRKEAESCDCLXG 825
GHYT G E++D+ LD IR+ A +C+ L G
Sbjct: 103 GHYTVGKEIIDTTLDRIRRLANNCEGLQG 131
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 73.3 bits (172), Expect = 2e-13
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Frame = +3
Query: 441 IVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYVPRA 620
++ V GQCGNQ+ FW+ + DEHG++ G E D+ D+ ++ + +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMN-DKKDLLFYQADDDHYVPRA 65
Query: 621 VLVDLEPGTMDAVRSGP-YGMLFRPDTL 701
VLVDLEP ++ + P + LF D +
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNI 93
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 73.3 bits (172), Expect = 2e-13
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Frame = +3
Query: 441 IVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYVPRA 620
++ V GQCGNQ+ FW+ + DEHG++ G E D+ D+ ++ + +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMN-DKKDLLFYQADDDHYVPRA 65
Query: 621 VLVDLEPGTMDAVRSGP-YGMLFRPDTL 701
VLVDLEP ++ + P + LF D +
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNI 93
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +3
Query: 510 EHGVDTTGVYKGES--DLQLDRINVYYNEASSGKYVPRAVLVDLEPGTMDAVRSGPYGML 683
EHG+ G + + D + + IN ++ E + GK+VPR + VDLEP +D VR+G Y L
Sbjct: 5 EHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSL 64
Query: 684 FRPDTLSS 707
F P+ L S
Sbjct: 65 FHPEQLLS 72
Score = 33.5 bits (73), Expect = 0.20
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 739 GHYTEGAELVDSVLDVIRKEAESCDCLXG 825
G YT G E++D V+D +++ AE+C+ L G
Sbjct: 84 GRYTIGREMIDVVMDRVKRLAENCNGLQG 112
>Z99171-1|CAB16308.1| 286|Caenorhabditis elegans Hypothetical
protein F47G4.1 protein.
Length = 286
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/82 (25%), Positives = 32/82 (39%)
Frame = +1
Query: 502 SQTSMASTRPEFTKGRATCSSTE*TFTTMRHLVVNTSPVPFSWIWSRALWTRSDQDPTGC 681
+ TS +F ATC E T + H NT+ P++ +S WT ++ C
Sbjct: 57 TSTSETKIAFKFLADNATCPIQEPT-SLQGHYFTNTTYQPYTVSYSAPTWTFANSTQLEC 115
Query: 682 CSAPILCLRSERRWQQXXXGHY 747
+ L +R W HY
Sbjct: 116 PTNYALFVRDLGPWCMKVIQHY 137
>Z82071-5|CAB04919.2| 514|Caenorhabditis elegans Hypothetical
protein W05B5.3a protein.
Length = 514
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 626 ENGTGDVFTTRCLIVVNVYSVELQVALPFVNS 531
E TG ++T RC I N + L+ A+ F NS
Sbjct: 239 EKCTGPIYTDRCPITSNFIVIPLKAAIDFANS 270
>Z82071-3|CAH04734.1| 336|Caenorhabditis elegans Hypothetical
protein W05B5.3b protein.
Length = 336
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 626 ENGTGDVFTTRCLIVVNVYSVELQVALPFVNS 531
E TG ++T RC I N + L+ A+ F NS
Sbjct: 61 EKCTGPIYTDRCPITSNFIVIPLKAAIDFANS 92
>AY204181-1|AAO39185.1| 336|Caenorhabditis elegans nuclear receptor
NHR-85 protein.
Length = 336
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 626 ENGTGDVFTTRCLIVVNVYSVELQVALPFVNS 531
E TG ++T RC I N + L+ A+ F NS
Sbjct: 61 EKCTGPIYTDRCPITSNFIVIPLKAAIDFANS 92
>AY204180-1|AAO39184.1| 514|Caenorhabditis elegans nuclear receptor
NHR-85 protein.
Length = 514
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 626 ENGTGDVFTTRCLIVVNVYSVELQVALPFVNS 531
E TG ++T RC I N + L+ A+ F NS
Sbjct: 239 EKCTGPIYTDRCPITSNFIVIPLKAAIDFANS 270
>AL110478-13|CAC14397.1| 514|Caenorhabditis elegans Hypothetical
protein W05B5.3a protein.
Length = 514
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 626 ENGTGDVFTTRCLIVVNVYSVELQVALPFVNS 531
E TG ++T RC I N + L+ A+ F NS
Sbjct: 239 EKCTGPIYTDRCPITSNFIVIPLKAAIDFANS 270
>U00052-3|AAK21426.1| 308|Caenorhabditis elegans Hypothetical
protein K02F3.4 protein.
Length = 308
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = -3
Query: 571 ILSSCRSLSPL*TPVVSTPCSSEIISQNFDPI*FPHWPACTWTISRISNTIFTHAFT 401
IL+SCR+L T V P +I S P+ F H P C + T +T T
Sbjct: 42 ILNSCRNLPDCLTTTV--PQLHQINSAEQSPLQFTHQPNCDLIVVLDEQTTYTTTMT 96
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,225,528
Number of Sequences: 27780
Number of extensions: 406430
Number of successful extensions: 1020
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1009
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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